Os06g0271475

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Revision as of 09:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0271475| Description = Hypothetical protein| Version = NM_001187776.1 GI:297724682 GeneID:9270500| Length = 3175 bp| Definition = Oryza sa...")
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Gene Name

Os06g0271475

Description

Hypothetical protein

Version

NM_001187776.1 GI:297724682 GeneID:9270500

Length

3175 bp

Definition

Oryza sativa Japonica Group Os06g0271475, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9125537..9128711

Sequence Coding Region

9125713..9126102,9126473..9126565,9126649..9126861,9127186..9127442,9127739..9128018
,9128116..9128396,9128546..9128666

Expression

GEO Profiles:Os06g0271475

Genome Context

<gbrowseImage1> name=NC_008399:9125537..9128711 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9125537..9128711 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgaaagcccaacgacgctgcaccaccgcagtggacatcgaccgcaacaccaccctaatggcgccgaagaagaaagggcaagcaaagaggccccggtcagcacccaagattacagaaaccccacttaatgactatgaactgaaaaggatgagaacgtgtcttcagaacaatgctatgatgcgacggctaggggtaccagcattatccagtattgtgtttggaaattcagttgcccagcgagatagagaaaagaataaggacaatgatgaccctgactttgatgccaatgctgaagatgatgatctcagtgagggctatgttagtaatgatagcctagtacctgagactgaagacctacagaacatgaagtctggacatgattgcttgaaacataagcctgctaccaagaaatccaagaagaatactgagaatgtaacctctgtgactcatcacgccatagggggcaaaagagttgttgcaccattgcaacctggtaaagtgacgaggtctaaaaagcatgtggcaccagatgttcttgctacacgtgaggttcttgttgctgatactcaagctgagatcccaattcaggctacaagtgaggttctcgctgctgacactcaagctgaaatcccaattcaggctttaagcgaggttaatgctgctcatactgaagaagatgcagaagcatatgaggagaggtggataaggggtcctaatgtaggaagaggtcttgaaaggatgtcccgctcaaagaagggcaaacttcctgtggtcattgaaccaggtaaaatgaggccaaactctgtgaaaattgctgcaaaatttgccaccgagtgcaacattgcagtcaggaaccatgttcccatattcccaaaatggaaggattacaaggacaacaagaaactcttaaggttttacatcaacaaagttgggtcaaagtttgatatggacacaactgctggtcctgtgagaaaggcatgtgtggcaatgatgaagagagctgtttgccagcagcgacataagctcaaaaagaagtattttgatccttatccacttcatctggtgttgaaaacatctcctgtaacatgcatgagtgatcttcagtggcttcaacttgttgaacactggaaggatgaaaaaaaaatgttgatttgtgaaaagaacaaagcaaacagagctaaagtgcagttccaccagacaactggttctcgcagctatgacatgcacatcatcgaattggctgaaatggagatgaagatcgcagaacctgttgaggatggctgtgaaccgaagtcagtgaatgatgctgtttctgaagtgcttgctggcaaaactaagaagaacaaatttcttgtgaatgtggggatcaacagcttacctgtcgattccagtgctggaagtcgccgcgagctacaagccgcactggtggaggagaagcagacatcagcagatcttagggagctagtgaacattcagcgccaacagctggatgagatggtgaagaaaatgcaggcagcagaagaagaaagggccaagaatgatgaggagatgaagcagaggcaagccgaaactgatactctacttaggcgtttgatggccatgattccatcgagtcaggcaagaatttaa</cdnaseq>

Protein Sequence

<aaseq>MPPKAQRRCTTAVDIDRNTTLMAPKKKGQAKRPRSAPKITETPL NDYELKRMRTCLQNNAMMRRLGVPALSSIVFGNSVAQRDREKNKDNDDPDFDANAEDD DLSEGYVSNDSLVPETEDLQNMKSGHDCLKHKPATKKSKKNTENVTSVTHHAIGGKRV VAPLQPGKVTRSKKHVAPDVLATREVLVADTQAEIPIQATSEVLAADTQAEIPIQALS EVNAAHTEEDAEAYEERWIRGPNVGRGLERMSRSKKGKLPVVIEPGKMRPNSVKIAAK FATECNIAVRNHVPIFPKWKDYKDNKKLLRFYINKVGSKFDMDTTAGPVRKACVAMMK RAVCQQRHKLKKKYFDPYPLHLVLKTSPVTCMSDLQWLQLVEHWKDEKKMLICEKNKA NRAKVQFHQTTGSRSYDMHIIELAEMEMKIAEPVEDGCEPKSVNDAVSEVLAGKTKKN KFLVNVGINSLPVDSSAGSRRELQAALVEEKQTSADLRELVNIQRQQLDEMVKKMQAA EEERAKNDEEMKQRQAETDTLLRRLMAMIPSSQARI</aaseq>

Gene Sequence

<dnaseqindica>2610..2999#2147..2239#1851..2063#1270..1526#694..973#316..596#46..166#gtgcgtccaatctccaccgccgccggttcgtaggacgcgatccatatgccgccgaaagcccaacgacgctgcaccaccgcagtggacatcgaccgcaacaccaccctaatggcgccgaagaagaaagggcaagcaaagaggccccggtcagcacccaagattacaggtgaatactttctctgccttcctctgtactagctatctgagttgccctcatgtgctaggatttgctagcgacagtggctagggaatatagccctcgttagatttttggtttatgcaaatattaggctataattgttcttgttaatgcagaaaccccacttaatgactatgaactgaaaaggatgagaacgtgtcttcagaacaatgctatgatgcgacggctaggggtaccagcattatccagtattgtgtttggaaattcagttgcccagcgagatagagaaaagaataaggacaatgatgaccctgactttgatgccaatgctgaagatgatgatctcagtgagggctatgttagtaatgatagcctagtacctgagactgaagacctacagaacatgaagtctggacatgattgcttgaaacataaggtactagatctctccattcaataatgttttacaacctttgtcaataattcactagttctagattactttacatattcatttatttcatttattgcagcctgctaccaagaaatccaagaagaatactgagaatgtaacctctgtgactcatcacgccatagggggcaaaagagttgttgcaccattgcaacctggtaaagtgacgaggtctaaaaagcatgtggcaccagatgttcttgctacacgtgaggttcttgttgctgatactcaagctgagatcccaattcaggctacaagtgaggttctcgctgctgacactcaagctgaaatcccaattcaggctttaagcgaggttaatgctgctcatactgaagaaggtttgtgcaagctactttaacaagtttttgataacagtaattagtatttaaattcacagcaaatgccatatcttgatagctatcacaaactctgttttcattattcaaggtgttggatggaacgatgattgccagatggacactaccccccaccttgatgagcatactcttgatgacaccaacgtcaatgaaaacgcagagggtgattctgaaggtatcttctccaaatcccgacactctaaaccctttctaaattcaacagcccacacaagtgttgttaattgtatcctttgcagatgcagaagcatatgaggagaggtggataaggggtcctaatgtaggaagaggtcttgaaaggatgtcccgctcaaagaagggcaaacttcctgtggtcattgaaccaggtaaaatgaggccaaactctgtgaaaattgctgcaaaatttgccaccgagtgcaacattgcagtcaggaaccatgttcccatattcccaaaatggaaggattacaaggacaacaagaaactcttaaggttttacatcaacaaagttggggtgagtgtctgaactttaggctttccactatgtttatttgtgaacataacattacataccatctctaacaagtacttgcaatttctctgaagttcatgtgtctttgaatgtgtgtgtctctgaatgagtgagaattagggtacattgtgcatctgttattgaatttagtgagtatgttattttcatttttggatggtcttgcttgaaggcattactcttctctgaagcattaattgaatgcacaaatttgaactaccatacgctgcctaatatctgttttagattcgttatctagcaattgactatgacattacctgttttcagtcaaagtttgatatggacacaactgctggtcctgtgagaaaggcatgtgtggcaatgatgaagagagctgtttgccagcagcgacataagctcaaaaagaagtattttgatccttatccacttcatctggtgttgaaaacatctcctgtaacatgcatgagtgatcttcagtggcttcaacttgttgaacactggaaggatgaaaaaaaaatggtaagctcttggcaataattttcatttcaagtttaccatgtggatctcataggtgccttaagatcataactttgttgctgcagttgatttgtgaaaagaacaaagcaaacagagctaaagtgcagttccaccagacaactggttctcgcagctatgacatgcacatcatcgaattggtgagtccaatttagttaatgtttgtttaatacatattgatttgttatcctcttgtatagatagttgatgcatgaagtgttaattaatattagagatattacagatttgtaatcactgttcaaaatacattgaagaagtaacaagctcaaatttttggttttctttcattgtttagggggacaagtacaaagatgcaccaccaaatgggcttgatttgtttaaagagctccactgcagcaagaagaaagccttcgctcctgctgtacaatcagctattgtaagtaaattgtcaattagttcacaaacaaatgatagattaaattggtatgcattgatcagttagccatgtattgtcgcttgcactgctaggctgaaatggagatgaagatcgcagaacctgttgaggatggctgtgaaccgaagtcagtgaatgatgctgtttctgaagtgcttgctggcaaaactaagaagaacaaatttcttgtgaatgtggggatcaacagcttacctgtcgattccagtgctggaagtcgccgcgagctacaagccgcactggtggaggagaagcagacatcagcagatcttagggagctagtgaacattcagcgccaacagctggatgagatggtgaagaaaatgcaggcagcagaagaagaaagggccaagaatgatgaggagatgaagcagaggcaagccgaaactgatactctacttaggcgtttgatggccatgattccatcgagtcaggcaagaatttaatgctgtgtggtatggttgctttggatggctgcattttgttgaacttgtgaagtacactcctgtagtgatgcttttctggtggagcacattatgtgcagtagactcattctatggtgaacttgaacctgtttagggtgcttgcttttggtatgatacagtgatttcagtaaacatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0271475, RefSeq:Os06g0271475