Os06g0272601

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Revision as of 09:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0272601| Description = Conserved hypothetical protein| Version = NM_001187777.1 GI:297724684 GeneID:9271849| Length = 3002 bp| Definition ...")
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Gene Name

Os06g0272601

Description

Conserved hypothetical protein

Version

NM_001187777.1 GI:297724684 GeneID:9271849

Length

3002 bp

Definition

Oryza sativa Japonica Group Os06g0272601, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9185473..9188474

Sequence Coding Region

9185474..9185530,9185729..9188140

Expression

GEO Profiles:Os06g0272601

Genome Context

<gbrowseImage1> name=NC_008399:9185473..9188474 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9185473..9188474 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aggcatcgaaacagatcaggcattggcggcttcggccacggcggcggcggcgtcctgagctcaccaatccccaccaagctcaccaagcaagctgccatggaaagtgaggacaagtttgacatgcttttgaggatgctcgaggagttcgagcgaaggcgggaggaggcagatcagagaaggagagctgatttccagtctctcaaggcggcggtagaatcgtggatgcttgaaatccagaagactgctgaagatttgcaaatttcggttggggacatgcaatccaaggtgacgcccaccacatgtttgacgaaatgcactagcaccgacgtcgagcctgatccccctgtggttgtggtggttacacgcgccacacctgacacgacctctatggagctggtagctgttgaagatgccatcggcgcaacctacaccaacaatcacaaccatcccaaggtgatgcccgccaagtgttcgatgaattgttccacccctaacctcaccgtggctgcgatggtttcgtgcacgtccacttctctggcctccatttgtcaggacatcacatgcaccaccgacatcgacgcccttgtttgtcccaaggagacacacatcaagtgtttgacattgagcctcgacgtcaagggtggcatccatgaccaagctgaggtcatgttccaggccatgacggctgcgtccaaggtagttccagcatatgtccagtctatggacaacttctcatcaaggatgaatgccaaccgcaagctggccacattgacacccgcaagatgttcagtgaaatggcatggtccgcacaagcactttgatgtcaatccatggccacctccaaactttaacgcatcagattcgagcaggtggtttggaatcctgattgacaagcattttccactaggggaaccactgaaacacttacatatcatgttggtgccattagtgtgggatcctggtgatagcaaagttcacctacacaagattttgttgaatgattggcttcaatgccaatactttcacctgggagataattgctggaacattgagcttgttatcagtgtcggagttcctgaagagttgtgtgtgtgggtcagctatatagcagttgctaagaaggaagcatgtgtggatcagaacaagggggtatcatatagtgaagaaatgagattctggtgtgaattgtattcacattgctatatatctgctcgactaattgggaaggggaactacatcctggagccatctaaagatcaaccaacttgtttgggtccacagaattttgagaaaggttcattcctattcactactattgatgatgttgataggtataatcttgacattggtactgtagtaagattatttgctgggaatttgaaggagttagtgaaacatggaagggggtttgacattggaatttctgtcatgcaagagcaaattgatggacaaggaattcatatggtttggtttccaggagtaaaatgctcatttaaattgaggttgaacacttgttgggtcatttgtcatttggagcctgtctctatgatctttgtccttgctccactaaaatgtggttcttttcttgaggcatggagtccagaaaatgcacccttacttgatgagagctgggttgaactgaagcaattgcagtcatgtgttcagattgaacagcacaagtatgctggactagcatctgagcctacaacctttggtttccacattaaaatctcaagggaattagcatgtgtgcatgctgatttatttcagactgctctagttatccagccacaaaggaattcctgcactaatataaagattcatgatgttttagttgagctctccttcattaaacaagagcattccaagttattaaaattgttccaatatctgcacatactagctctgttgggttggacattgattgctaaaatggaggtgcatctggactttaatggggctccaccttgtttacttattgctgccgctagaatatctgcacaaggacatacaagcacactagggctcttgaaaggtgaatcaatttcaatgctacagatacagtgggatctagaattcagtgctattatgtgcttcagctacatattattggtctattatactgaagaatggtcttggccgatggaaaatgaaaggaataaagaaaagtgcaatcaagaatttcatttcagcatagaagaacacttttactcgagccatcaaatcattattgcaaggcttgtgggacaccatgagtactatggagaaggcaaagagactaagctgcagcgaaagattgtgcgtacaaggaaaagcaatggtgatagggatgacctgatcacattgatcatccgagtgctacaggtgccatgggacccaggtggtttacgttttcaaaagtttaattggcatcaacttgaggacaagttgaattttaaggagaagggattgttagggtctcaaccttga</cdnaseq>

Protein Sequence

<aaseq>RHRNRSGIGGFGHGGGGVLSSPIPTKLTKQAAMESEDKFDMLLR MLEEFERRREEADQRRRADFQSLKAAVESWMLEIQKTAEDLQISVGDMQSKVTPTTCL TKCTSTDVEPDPPVVVVVTRATPDTTSMELVAVEDAIGATYTNNHNHPKVMPAKCSMN CSTPNLTVAAMVSCTSTSLASICQDITCTTDIDALVCPKETHIKCLTLSLDVKGGIHD QAEVMFQAMTAASKVVPAYVQSMDNFSSRMNANRKLATLTPARCSVKWHGPHKHFDVN PWPPPNFNASDSSRWFGILIDKHFPLGEPLKHLHIMLVPLVWDPGDSKVHLHKILLND WLQCQYFHLGDNCWNIELVISVGVPEELCVWVSYIAVAKKEACVDQNKGVSYSEEMRF WCELYSHCYISARLIGKGNYILEPSKDQPTCLGPQNFEKGSFLFTTIDDVDRYNLDIG TVVRLFAGNLKELVKHGRGFDIGISVMQEQIDGQGIHMVWFPGVKCSFKLRLNTCWVI CHLEPVSMIFVLAPLKCGSFLEAWSPENAPLLDESWVELKQLQSCVQIEQHKYAGLAS EPTTFGFHIKISRELACVHADLFQTALVIQPQRNSCTNIKIHDVLVELSFIKQEHSKL LKLFQYLHILALLGWTLIAKMEVHLDFNGAPPCLLIAAARISAQGHTSTLGLLKGESI SMLQIQWDLEFSAIMCFSYILLVYYTEEWSWPMENERNKEKCNQEFHFSIEEHFYSSH QIIIARLVGHHEYYGEGKETKLQRKIVRTRKSNGDRDDLITLIIRVLQVPWDPGGLRF QKFNWHQLEDKLNFKEKGLLGSQP</aaseq>

Gene Sequence

<dnaseqindica>2..58#257..2668#gaggcatcgaaacagatcaggcattggcggcttcggccacggcggcggcggcgtcctggttccgggctggaatcttggcgatctcttcccatcctcttctacctccagcttctctctctcctttccagaaacttctagacacttgtatcagctagctagtttgcttctctcttttcccccaaaatacttgtgagagttgtattcaagcttgttgttactaattgggagaagagggttcctaacaatctggtatcagagctcaccaatccccaccaagctcaccaagcaagctgccatggaaagtgaggacaagtttgacatgcttttgaggatgctcgaggagttcgagcgaaggcgggaggaggcagatcagagaaggagagctgatttccagtctctcaaggcggcggtagaatcgtggatgcttgaaatccagaagactgctgaagatttgcaaatttcggttggggacatgcaatccaaggtgacgcccaccacatgtttgacgaaatgcactagcaccgacgtcgagcctgatccccctgtggttgtggtggttacacgcgccacacctgacacgacctctatggagctggtagctgttgaagatgccatcggcgcaacctacaccaacaatcacaaccatcccaaggtgatgcccgccaagtgttcgatgaattgttccacccctaacctcaccgtggctgcgatggtttcgtgcacgtccacttctctggcctccatttgtcaggacatcacatgcaccaccgacatcgacgcccttgtttgtcccaaggagacacacatcaagtgtttgacattgagcctcgacgtcaagggtggcatccatgaccaagctgaggtcatgttccaggccatgacggctgcgtccaaggtagttccagcatatgtccagtctatggacaacttctcatcaaggatgaatgccaaccgcaagctggccacattgacacccgcaagatgttcagtgaaatggcatggtccgcacaagcactttgatgtcaatccatggccacctccaaactttaacgcatcagattcgagcaggtggtttggaatcctgattgacaagcattttccactaggggaaccactgaaacacttacatatcatgttggtgccattagtgtgggatcctggtgatagcaaagttcacctacacaagattttgttgaatgattggcttcaatgccaatactttcacctgggagataattgctggaacattgagcttgttatcagtgtcggagttcctgaagagttgtgtgtgtgggtcagctatatagcagttgctaagaaggaagcatgtgtggatcagaacaagggggtatcatatagtgaagaaatgagattctggtgtgaattgtattcacattgctatatatctgctcgactaattgggaaggggaactacatcctggagccatctaaagatcaaccaacttgtttgggtccacagaattttgagaaaggttcattcctattcactactattgatgatgttgataggtataatcttgacattggtactgtagtaagattatttgctgggaatttgaaggagttagtgaaacatggaagggggtttgacattggaatttctgtcatgcaagagcaaattgatggacaaggaattcatatggtttggtttccaggagtaaaatgctcatttaaattgaggttgaacacttgttgggtcatttgtcatttggagcctgtctctatgatctttgtccttgctccactaaaatgtggttcttttcttgaggcatggagtccagaaaatgcacccttacttgatgagagctgggttgaactgaagcaattgcagtcatgtgttcagattgaacagcacaagtatgctggactagcatctgagcctacaacctttggtttccacattaaaatctcaagggaattagcatgtgtgcatgctgatttatttcagactgctctagttatccagccacaaaggaattcctgcactaatataaagattcatgatgttttagttgagctctccttcattaaacaagagcattccaagttattaaaattgttccaatatctgcacatactagctctgttgggttggacattgattgctaaaatggaggtgcatctggactttaatggggctccaccttgtttacttattgctgccgctagaatatctgcacaaggacatacaagcacactagggctcttgaaaggtgaatcaatttcaatgctacagatacagtgggatctagaattcagtgctattatgtgcttcagctacatattattggtctattatactgaagaatggtcttggccgatggaaaatgaaaggaataaagaaaagtgcaatcaagaatttcatttcagcatagaagaacacttttactcgagccatcaaatcattattgcaaggcttgtgggacaccatgagtactatggagaaggcaaagagactaagctgcagcgaaagattgtgcgtacaaggaaaagcaatggtgatagggatgacctgatcacattgatcatccgagtgctacaggtgccatgggacccaggtggtttacgttttcaaaagtttaattggcatcaacttgaggacaagttgaattttaaggagaagggattgttagggtctcaaccttgatgggctcttgggctgatgttgcactaatattcaattgtggcccatggaagcttggacagggaggatacaaatacagagcagcaacaaccatggcgaggcatcgaaacagatcaggcattggcggcttcggccacggcggcggcggcgtcctggttccgggctggaatcttggcgatctcttcccatcctcttctacctccagcttctctctctcctttccagaaacttctagacacttgtatcagctagctagtttgcttctctcttttcccccaaaatacttgtgagagttgtattcaagcttgttgttactaattgggagaagagggttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0272601, RefSeq:Os06g0272601