BGIOSGA031230

From RiceWiki
Revision as of 17:27, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031230

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031230, complete gene.

LocusTag

OS09G0552900

Ensembl Transcript ID

BGIOSGA031230-TA

Ensembl Protein ID

BGIOSGA031230-PA

Length

2311

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20736844..20739154

Sequence Coding Region

20736844..20737000,20737104..20737381,20738930..20739154

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20736844..20739154 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20736844..20739154 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGGTTGGTCTCCCTCCAGGCTTTAGATTTCATCCAACTGATGAGGAGCTTGTGAACTACTACCTCAAGAGGAAGGTCCATGGCCTCAGCATCGACCTCGACATAATCCCAGAAGTAGACCTCTACAAATGTGAGCCCTGGGAATTGGAAGAGAAATCCTTCCTGCCTAGTAAAGACTCCGAGTGGTACTTCTTTGGGCCAAGGGATAGAAAGTATCCCAATGGATGCCGCACAAACCGTGCAACCAGAGCAGGATACTGGAAATCGACGGGGAAAGATCGGCGGATCAACTACCAGAACAGGTCAATTGGTATGAAGAAGACACTAGTCTACTACAAAGGTCGAGCTCCTCAGGGGATTAGAACCAGTTGGGTGATGCATGAGTACCGCATCGAGGAAAGCGAATGCGAGAACGCCATGGGGATTCAGTTACAGGACTCCTATGCGCTATGTCGGATTTTCAAGAAGAATGTGGTGTTGGGTGAATTTGACAAGAAAGGGGAGTGCAGTTCATCACAGGCTAAAGGAAATGAAGAACAAGTTACAGATTTCGGGGATGCTGGACAATCCTCGGGAGCAAATGAGAATGATAAAGACAATTCATGGATGCAATTCATAGCAGAGGATCTATGGTGCACCAACAAACTAAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPVGLPPGFRFHPTDEELVNYYLKRKVHGLSIDLDIIPEVDLYKCEPWELEEKSFLPSKDSEWYFFGPRDRKYPNGCRTNRATRAGYWKSTGKDRRINYQNRSIGMKKTLVYYKGRAPQGIRTSWVMHEYRIEESECENAMGIQLQDSYALCRIFKKNVVLGEFDKKGECSSSQAKGNEEQVTDFGDAGQSSGANENDKDNSWMQFIAEDLWCTNKLK</aaseq>

Gene Sequence

<dnaseqindica>1..157#261..538#2087..2311#ATGGCGCCGGTTGGTCTCCCTCCAGGCTTTAGATTTCATCCAACTGATGAGGAGCTTGTGAACTACTACCTCAAGAGGAAGGTCCATGGCCTCAGCATCGACCTCGACATAATCCCAGAAGTAGACCTCTACAAATGTGAGCCCTGGGAATTGGAAGGTAATCCGAAAACTTAATTGCTCATCCATGTTCTCACTTCTCATCATCACTCCTGAATCCTGATTCGGCTCGAGATGTTTTATTTGTCTTCTTGTTTTGAAAGAGAAATCCTTCCTGCCTAGTAAAGACTCCGAGTGGTACTTCTTTGGGCCAAGGGATAGAAAGTATCCCAATGGATGCCGCACAAACCGTGCAACCAGAGCAGGATACTGGAAATCGACGGGGAAAGATCGGCGGATCAACTACCAGAACAGGTCAATTGGTATGAAGAAGACACTAGTCTACTACAAAGGTCGAGCTCCTCAGGGGATTAGAACCAGTTGGGTGATGCATGAGTACCGCATCGAGGAAAGCGAATGCGAGAACGCCATGGGGATTCAGGTTATTCATCCATCCTCCTCACCAGCTGTTAGTCTCAGTTAAATCATTTTGAGTTGTATCTGCTATACTTGGTTAGCTGAGGCTGCATTTCAGAGTATCAAGCATAGCCAATCTTCTCAGTTAGCAGGATTTGTATGTATTTATGTTATGCAATAGTGATCATATTTCATAATATGCAATATTTGAGATATGTGCCTGCTAAAACAAAATTGGCAATAGAAACATACAGAAGAAACAACTAGGGCATATTTGCTAGTTCAGGGAACCTACGTTCTTTATGCATGGAGTGCATGAAAAGTTAGGGCTCTTCTCTCTTCTTTTCCCCCATATCCATCAGTGGTAGCCATAAAGTATTCCTTGCTTCCATGGACCATAGCTACTTTACAAAGTACATTAGAAGGTTTTCTCAGTTCTCTAATGGGTCACACATGGTTCACTTTTCTAGGTGCTCTTGATAAGACAAATTTAACATCCAATTCTTGGTTCATGTCGCGATGATGTGAAATCATACAACATGATTGTACAGGGGTTAGGTGCGTCATCGTTTCATGATGCAGAGTATAAAAATCTAGGTCAGTTGCATGTTGATGCTACCTTAAAGCTTAGACATCCTTCAGTGTGGCCCTGTGTAGTGTCGGTGGCTTTACACTTTATTCTCCCCGTCAACCTCCAACTTTACTCACTAGTGAAAACCATAACTGAACATGAGGACTGATCCCATGTTTATTGTAAATTAGATCAAAGTGCACATAGTGATACATATTGTATGTCCACTCTTAAATTTACATTAGTTGTGTTCGAAGACTCTGCATTAGTTGAACTGTTGACATTTATATTAAGTAAACATAGAGTTCAACCAAAACCATTGGTGACTGAAACATAGTCTGATTTCAAACAAGTGGAATCTTGAAATAGCAATTCAGCAACTACCTTAATAAAAACTGCTCAAAAGTTATGGGGTTGTTCAGATTGATGCTATTTTCAACCATACCATTTTTTGGTAAAGTTACCAAAAAAAAATGTCTACGTTTAGTTTATTGCCAAATTTGGTAAATACATAAGAAAATTTTGGCAATATTGCCATCTTGCCATTGCCAAAATTTGGTAAGGTTTATTTTGGTTACAATCTAAACAAGCCCTATGATTGATGGTCTAAGAGAAATCAATAGCAGCATAAATTCAAGTTGCAATTTTTATACTGTTCCCTGCCGAACTTGAAGTTGAATCCTCAAGAATTTTACTCTAAATTTGTTTAGTACTGATAATGAACATTCAATCCAAATTGAAAATATGCACATGTAAATTAGCAAACAACAAGCGTAGAATGTAGAAGCATATAATCCATTAACTTTGTAAGATTACAGCTGTATATTATCAGTAAACAGAAAATTAAAGAAGCACCTTACTTCGGTTCACTAGTGCGCTGAAATAATTCTTCATCCACATTGTTGAACTTGAAATCTCCCCATGATTCCAATGTAGAAAAGTCCAACCTGTGCAAAAGGAAATAAAGTAATTTAGATCATTTATTCATTTTCATCATTTTAGTTACAGGACTCCTATGCGCTATGTCGGATTTTCAAGAAGAATGTGGTGTTGGGTGAATTTGACAAGAAAGGGGAGTGCAGTTCATCACAGGCTAAAGGAAATGAAGAACAAGTTACAGATTTCGGGGATGCTGGACAATCCTCGGGAGCAAATGAGAATGATAAAGACAATTCATGGATGCAATTCATAGCAGAGGATCTATGGTGCACCAACAAACTAAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031230