Os09g0502200

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0502200| Description = Similar to Beta-1,3-glucanase (Fragment)| Version = NM_001070121.1 GI:115479984 GeneID:4347490| Length = 3996 bp| D...")
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Gene Name

Os09g0502200

Description

Similar to Beta-1,3-glucanase (Fragment)

Version

NM_001070121.1 GI:115479984 GeneID:4347490

Length

3996 bp

Definition

Oryza sativa Japonica Group Os09g0502200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20087420..20091415

Sequence Coding Region

20087896..20087933,20089891..20091243,20091333..20091384

Expression

GEO Profiles:Os09g0502200

Genome Context

<gbrowseImage1> name=NC_008402:20087420..20091415 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20087420..20091415 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccatggccgccctcctcgtcgtcgtcttcctcgccggctgccacgtgggggtagtggtggcgcaggggaggagcaccgcggcggcgcatggcatcggggtgaactacgggagggtggcggacgacatcccgccgccggcgaggtcggtggagctcctccgggcggtgggggccgggtcggtgaagatctacgacgcgaactcgagcgtgctccgcgcgctggcggggacgcgcatgcgggtgtcgatcatggtgcccaacgagatcatcccggggctcgccgcctccgccgccgccgcggacaggtgggtggcggagaatctggtgccctactacccggagacgcgggtcaagtacctcctcgtcggcaacgagctcctctccgactactccatcgccaactccacctggccccgcatcgtgccggccatggagaacctccacgtgagcctccggaggaggaggatcagcagcgtcaagatcagcaccacgctcgccatggacgcgctcacgtcggggtcgttcccgcggccgccgtccgccgcggcgttccgccccgacatcgccggcgacgtcgtgcgcccgctgctccggttcttgaacgggacgaactcgtactacttcgtcgacgcctacccgtacttcgtctgggccggcaacaacgacaccgtcccgctcgagtacgcgctcttccagggcggcggcggcggcggccgctacgttgatccgggcacggggctcacatacaccaacatgctcgacgaaatgctcgacgccgtggtgcacgcgatggcgaagctggggtacgggggcgtgaagctgggcatcgcggagaccggctggcccaacggcggcgactacgagcagatcggctgcaacgcccacaacgccgccatctacaacaggaacctcgcggcgcggatggcgaggagccccggcacgccggcgcggcccggcgcgaagatgccggtgttcgtgttctcgctctacaacgaggacctcaagccggggcccggcacggagcggcactgggggctgtactacgccaacggcacggcggtgtacccggttgacctcgccggagcgcggccgctccggtcgtacccgctgctgccgccgccggagaacgacgcgccgtacaagggccccgtgtggtgcgtgctcgccggccgccgcggcgagaagctgaacgagacggcggtgggcgacgcgctggcgtacgcgtgcgggcaggggaacgggacgtgcgacgccatccagcccggcggggagtgcttccggccgaacaccacggcggcgcacgccagctacgccttcaactcgtactggcagcagctgaggaagaccggtgcgacgtgctacttcaacaacctcgccgaggagaccaccaaagatccaagccacggatcatgcaaattccacagttctttggactaa</cdnaseq>

Protein Sequence

<aaseq>MASMAALLVVVFLAGCHVGVVVAQGRSTAAAHGIGVNYGRVADD IPPPARSVELLRAVGAGSVKIYDANSSVLRALAGTRMRVSIMVPNEIIPGLAASAAAA DRWVAENLVPYYPETRVKYLLVGNELLSDYSIANSTWPRIVPAMENLHVSLRRRRISS VKISTTLAMDALTSGSFPRPPSAAAFRPDIAGDVVRPLLRFLNGTNSYYFVDAYPYFV WAGNNDTVPLEYALFQGGGGGGRYVDPGTGLTYTNMLDEMLDAVVHAMAKLGYGGVKL GIAETGWPNGGDYEQIGCNAHNAAIYNRNLAARMARSPGTPARPGAKMPVFVFSLYNE DLKPGPGTERHWGLYYANGTAVYPVDLAGARPLRSYPLLPPPENDAPYKGPVWCVLAG RRGEKLNETAVGDALAYACGQGNGTCDAIQPGGECFRPNTTAAHASYAFNSYWQQLRK TGATCYFNNLAEETTKDPSHGSCKFHSSLD</aaseq>

Gene Sequence

<dnaseqindica>3483..3520#173..1525#32..83#tttcccacgccaccgtcgaacaccttcacccatggcgtccatggccgccctcctcgtcgtcgtcttcctcgccggctgccacggtgagcgccgccgcccaccacctccgccttctcgtgttcttacttgagatatggctaaatgttttttttaatttttttttggctgggagtgggggtagtggtggcgcaggggaggagcaccgcggcggcgcatggcatcggggtgaactacgggagggtggcggacgacatcccgccgccggcgaggtcggtggagctcctccgggcggtgggggccgggtcggtgaagatctacgacgcgaactcgagcgtgctccgcgcgctggcggggacgcgcatgcgggtgtcgatcatggtgcccaacgagatcatcccggggctcgccgcctccgccgccgccgcggacaggtgggtggcggagaatctggtgccctactacccggagacgcgggtcaagtacctcctcgtcggcaacgagctcctctccgactactccatcgccaactccacctggccccgcatcgtgccggccatggagaacctccacgtgagcctccggaggaggaggatcagcagcgtcaagatcagcaccacgctcgccatggacgcgctcacgtcggggtcgttcccgcggccgccgtccgccgcggcgttccgccccgacatcgccggcgacgtcgtgcgcccgctgctccggttcttgaacgggacgaactcgtactacttcgtcgacgcctacccgtacttcgtctgggccggcaacaacgacaccgtcccgctcgagtacgcgctcttccagggcggcggcggcggcggccgctacgttgatccgggcacggggctcacatacaccaacatgctcgacgaaatgctcgacgccgtggtgcacgcgatggcgaagctggggtacgggggcgtgaagctgggcatcgcggagaccggctggcccaacggcggcgactacgagcagatcggctgcaacgcccacaacgccgccatctacaacaggaacctcgcggcgcggatggcgaggagccccggcacgccggcgcggcccggcgcgaagatgccggtgttcgtgttctcgctctacaacgaggacctcaagccggggcccggcacggagcggcactgggggctgtactacgccaacggcacggcggtgtacccggttgacctcgccggagcgcggccgctccggtcgtacccgctgctgccgccgccggagaacgacgcgccgtacaagggccccgtgtggtgcgtgctcgccggccgccgcggcgagaagctgaacgagacggcggtgggcgacgcgctggcgtacgcgtgcgggcaggggaacgggacgtgcgacgccatccagcccggcggggagtgcttccggccgaacaccacggcggcgcacgccagctacgccttcaactcgtactggcagcagctgaggaagaccggtgcgacgtgctacttcaacaacctcgccgaggagaccaccaaagatccaagtaagcctgaaaaatatctggaaaattttactccatttttgctcagatttcgattgatacatgcaaatgcaatttatgatttccatctttagtgatctaggttgatggatgaatttactttggatgctggttctttagaaattagaattctgtaaggtctagaatagatgtggcgttttgctggtgagggaataaaggcgatgtctttatggcattggtgatgaactcgtgaaagctggtcaagcttgcaattttttgtgagcattacagcactaggcgatgtcttctcgtttagttgtcttttctgatgattgggttgatgaaaacaaataatcttacgtatctcctgggattaggtttgattatttaaatgacttctgaagtcagtgtcaactggagaaggatgaaatttctaggacagtaggattacaagtgcattgtcaataagaaactatttgctggaatcagattacaggtgcccaggatataattgtacctgataatattaatcaacagcacttcagttgacccaatacattatgatctcgatcccgattggttttgatttttgaatgttactaatttaagcatatctaatgctagtgttttcagataggttcatatttagaatttgggttaccgtagcttgtgtagtcctataattggaactcctcgctaggattttggaacatacatttggtacttaatttaaatgataaagtataattttaaagaatgaaatttctgaaccatgttgaacaatgagcatatgttaaacactactgtagaagctaattcatttgttcatgctaatataataccccaaaattccccattagtcatttgcgtagtgcatatacagtagaaggcatctttattaggatctatttatgatgtttgtctctccctggctcacttccaaaagattttcagtctgcacatttgttctgaaagattcattcagacgaatggagctgactgcttggctgtcattactgcggacaaagtatgatccgtgggttgccttccatccaaatgccacagtacatgctcgcatgcttgtgaacttggaccatatattgatttggtcaaaagactcaaacccacctgcacatttcgcatagccttgagtaaggccaactgcaagcctgcaacctgcatccctgcaaagcatacacaggcatttgcagggccatgactataaactgttcttagacagctggacatttgggagtggggaaaaatgctgagacactgcctctttatttttctcctttacaacgtacttcctctgctgacaaatatttggcgtttagaacaagggttggtcaagcttctggaactttggccatgaataatttctcaaatgcttagttttgccttcaaaagtactatcataatattataatatcattagattttataaacttgttatgatataaaattgattatcaaagtttcaaaagttcgaccaaatcttatcctaaacgtcaaatatatgtgacatgatgagtattctctagcaagttctctgtgtgcagaagaaaatagtcatttcattcatgacagtgtaagcattttaggtgggacgtcagtgtaatgctccctttcatagctaaacatccttggacactagctcgtgtatgtatgatcttcttctgttctttagcatctcacttagcttataacttggtaaaagtagccttggtggatgttgctttcgactcaaaagaaaggtcctttgctaactcaactaggagaaatcaggataccaaatctgctaatggtgcactattatctgttactcttgggcacgcactttaccattttctgcaagcacaagcaacttattcggtgtatcttaatatgcttctattttacacttcagtggttaacctgccgtgctgattaagtgattagttcgaatcactgattttgttgtgtgtgttttttgcaggccacggatcatgcaaattccacagttctttggactaactgattgcatgggaggacaatatgaaaatgaacaacattgttctcgatttattttatttttgtcaaacctgattagatttagacccaggaagttaggtagttgagtacttctgtatctgctcatcgtctacaaaacctgtgaactgtgatgtaacagcgaaatttgccgtctgtttttctgtggcttaatcagtagaagaagatctgtggcttaattagaacgaaattttcagaactgaaccacctgcctctgcatgggcctcacatgggccatacatgggcctgcacctgcctctgcaaccgagctaggagtagcagttctgccacacggcccgtctacaaggatggtgttgtactgtgtcactcatccttcgagttttagttttttttttgtaatatcttttaatagtttgcacatcatctacagaaatattttgatgtacgcaagttatttaaaaagaatcttttatattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0502200, RefSeq:Os09g0502200