Os09g0133700

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Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0133700| Description = ATPase, BadF/BadG/BcrA/BcrD type domain containing protein| Version = NM_001069167.1 GI:115478073 GeneID:4346461| Le...")
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Gene Name

Os09g0133700

Description

ATPase, BadF/BadG/BcrA/BcrD type domain containing protein

Version

NM_001069167.1 GI:115478073 GeneID:4346461

Length

3815 bp

Definition

Oryza sativa Japonica Group Os09g0133700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2504036..2507850

Sequence Coding Region

2504058..2504253,2504929..2505076,2505265..2505456,2505878..2506006,2506368..2506537
,2506946..2507076,2507391..2507468

Expression

GEO Profiles:Os09g0133700

Genome Context

<gbrowseImage1> name=NC_008402:2504036..2507850 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2504036..2507850 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggctacgagaacggcgactcgccggcggccgccgccggagacggcggcgtcatcctgggcgtcgacggcggcaccactaacaccgtctgcgtctgcctgccggtcgcaatgccgccgccggaatcgcccggcgccgtccccgtcttgtcccgcgccgtcgccggctgctccaaccgcaactccgtcggagaaagtgctgcactggaaactctagaacaggtcatggcacaggccctcacattggtcaacacggatcgttcagctgtccgtgcagtttgtttagctgtatctggagttaaccatccttctgatcagcagaggatgctagactggattcgagatctcttccctggccatgtcaagttttatgtggaaaatgatgcggtggcagctctggccagtggtacaatgggaaagctacatggctgtgtattgatagcgggcactggaagcatagcttatggggtcactgaagatggaaaggtagcaagagcagctggtgctggacctgttttgggcgactggggtagtggatatggcattgctgcacaggccctgacagcagtcgtaaaagcatacgatggccgtggacctcatactaatcttacaagagagatccttaggaagcttgagctttcttcaccagatgaattgattgggtggacgtatgcagatccatcttgggcccgtattgcagcacttgttcctgttgtggtatcttctgctgaagatggtgatgaagtagcaaacaaaatattgcatgattcagtgcaggagttagctgatagtgttgttgctgttgttcggcgccttaaattgtgtggtgaagatggaatggaccaatttccgcttgttttggttggaggtgttctcgaaggcaacaaaaaatggaacattagtggtgaggttgtaagatgtatttccaaagtcttcccaggcgtccatcctattcgacctgaggtggaaccagccattggtgcagcattactagcttggaaccatcatcgcaaaggactgaaactggaaaacggaagttga</cdnaseq>

Protein Sequence

<aaseq>MGGYENGDSPAAAAGDGGVILGVDGGTTNTVCVCLPVAMPPPES PGAVPVLSRAVAGCSNRNSVGESAALETLEQVMAQALTLVNTDRSAVRAVCLAVSGVN HPSDQQRMLDWIRDLFPGHVKFYVENDAVAALASGTMGKLHGCVLIAGTGSIAYGVTE DGKVARAAGAGPVLGDWGSGYGIAAQALTAVVKAYDGRGPHTNLTREILRKLELSSPD ELIGWTYADPSWARIAALVPVVVSSAEDGDEVANKILHDSVQELADSVVAVVRRLKLC GEDGMDQFPLVLVGGVLEGNKKWNISGEVVRCISKVFPGVHPIRPEVEPAIGAALLAW NHHRKGLKLENGS</aaseq>

Gene Sequence

<dnaseqindica>23..218#894..1041#1230..1421#1843..1971#2333..2502#2911..3041#3356..3433#acggagagagagcaacgaggggatgggcggctacgagaacggcgactcgccggcggccgccgccggagacggcggcgtcatcctgggcgtcgacggcggcaccactaacaccgtctgcgtctgcctgccggtcgcaatgccgccgccggaatcgcccggcgccgtccccgtcttgtcccgcgccgtcgccggctgctccaaccgcaactccgtcggaggtaaccaccgtacaaggcttggcccagttccgtggcggcccctgctgcatatgtaatggttggatcttggggtttgaccatcggtatcgggttagattttggcgatttgcggtgctgtgaacgccactgctgccgtgcaattctggtgaattttgcgacaatatagtgttcccatgtcttaattctggtgaattttgcgacaatatagggtttcagagaagattaattatttgcataattatgatctccaaaatttttctaatgtgaaatttattgatgattttgaaaagaaaaaagttcatctgtttcttataaattcagtggtttcctacctagaatcatctgatccagatacataataggagtagaaaatggcattgctgttgctaagctgtggtatctatgtagtagcctggtaaattttaactgatggggaatacatccttttatatgtggatgttgattagtatagaactaaaaatcataccattacttgaaacatcattatgataccaccgttattgcagcttactaacctttctaattgaatggtttccccgtattaattcatattttcactagtctaggtgctataaattattatagatagagttgggtattgcacgagtttttgctcaagtaatactgatcactttgtcctttatcttatttcagaaagtgctgcactggaaactctagaacaggtcatggcacaggccctcacattggtcaacacggatcgttcagctgtccgtgcagtttgtttagctgtatctggagttaaccatccttctgatcagcagaggatgctagactggattcggtattgatctctgcatatatccccttcctgaaaattcatccgctggccacttcaaatagcatcaataaattttgtaaatcatggtttcttattgaattggacacagtctgaagctatcagggaaacaatgcatgagttaaaatttttcacttgctgctaagtgctaagtgagcttttttgttctccagagatctcttccctggccatgtcaagttttatgtggaaaatgatgcggtggcagctctggccagtggtacaatgggaaagctacatggctgtgtattgatagcgggcactggaagcatagcttatggggtcactgaagatggaaaggtagcaagagcagctggtgctggacctgttttgggcgactggggtaggtgagttacatttataagagaagggaatgttaagaaattccaaagataaatgtgttatttgaagttggtatactgtttcttttgggggatttcatttgcatattctcctagcaaaagcttctgatctataacatgaaaatcagacaatatgttatttatttgcaaggggttatgaatttccacttagtgtgaaaacccactatcatgaattgaccatgacatgcttaattaagggtgaataggcatttaaaactgttagcattttcaatagagtgacaggaaaacataggttacattatttgaccatgaatacatccacatccttaggagaaccccaatttttttccagagcaatatattttcaatagcttttacatgtgacaaaggaaatgtaggtgacaccatgtgtacattaatgcagtggatatggcattgctgcacaggccctgacagcagtcgtaaaagcatacgatggccgtggacctcatactaatcttacaagagagatccttaggaagcttgagctttcttcaccagatgaattgattgggtaagttctctcgtacatatatatcctttttgccaacacattctatttcggttgtatttttccattaagtttttaccatgagaaattatcactattgtcaagcatcccttttgagatcttttttccattatgaaacttgtcctgttgatgcattaagctcatcacatccaacgatccatattttaacatcctatgaaggcgatactacgatatttggaccaaactggtctgaacaaactgctatttcagtgttgaatgccaaaaagacatcctgcgattgtttcatgttttatcttgaaaatctacgatatttggagtctttaagttagttatcaacttatcatccttgtctgtggcataggtggacgtatgcagatccatcttgggcccgtattgcagcacttgttcctgttgtggtatcttctgctgaagatggtgatgaagtagcaaacaaaatattgcatgattcagtgcaggagttagctgatagtgttgttgctgttgttcggcgccttaaattgtgtggtgaaggtagtaattcagcacagtttgtgtattattctcctaacgaatttcttgatgtttattcatgaaatgattggagagcttgcatcatataataccaaagcaagtagcaattttttatgttactgcaaccaggtacttccagttttagtccaagatattcttcttcgaaactgtaggttcattgtctactagtgcatggcacaagttgttgcactctgccactctgaatgcaggttttgggtcaagcccaacctatttccatgatgcacttgatttgacacaaaagcacgcgtttttagagattatgtaaggcgaggttgtcagatatttatattgttaagttgtaactctttgaggaattgagtaaaacattatcgtgtataactgagggcttccttttactctgtgcagatggaatggaccaatttccgcttgttttggttggaggtgttctcgaaggcaacaaaaaatggaacattagtggtgaggttgtaagatgtatttccaaagtcttcccaggcgtccatcctattcgacctgaggttagtgttgtactactttatcctgttgtgagtttcattttctagcagtgcgatttactagagattcaaaaggtcaagcgtttacaatttcgggggtattttaccttttctggagaatacaatttttggggatgcttcagaagtatttttcattcagtgattgtatatggacattagtttatgtaggtaatgttgctggatttagttttgcataatttctgtctccagcattcaagtgaacagtccacttaaatagtgcgaacaactttcaggtttgacagtgataaaaaagttatttttatcacattttgcaggtggaaccagccattggtgcagcattactagcttggaaccatcatcgcaaaggactgaaactggaaaacggaagttgatctctagcatatggaatttatttcaactgtaaattacagaactgaacagccagaggattaataagattgggatggtcacacaggcacattcatcagcatcaaggttgttgctgcgtgaagagcgttatggatggatgtgctttctgtgagttgtgtaagcggggaacagatgcatttcttatgtaattagttaccgtgttcaaagaattgttcacgacatttggttctaactcttggtgacttgtacgtgtgctattagagagttccaaggaacatgtctgaaatgaacaggtcatgttaaaatgtgtatttttacctgttcggttaccttgtatctgtatttggtcgaaatgctgaattgattcaatcgtcacctgcattt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0133700, RefSeq:Os09g0133700