BGIOSGA031472

From RiceWiki
Revision as of 17:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031472

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031472, complete gene.

LocusTag

OSJNBA0001O14.4

Ensembl Transcript ID

BGIOSGA031472-TA

Ensembl Protein ID

BGIOSGA031472-PA

Length

2496

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20311091..20313586

Sequence Coding Region

20313483..20313586,20312359..20312454,20311091..20311658

Genome Context

<gbrowseImage1> name=IndicaChromosome10:20311091..20313586 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:20311091..20313586 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCAGCCGCAGCCCGCCACCAAAGGACCGCAGGATTCGTACTGAGCGTACCTCATACCGTGATGCGCCATACAGGAGAGACAGCCGCCGTGGTCCTAGCAGATTTCCTAATGATTTGTGCAACAATTGTAAGCGTCCAGGACATTTTGCTAGAGATTGTCCAAATGTGGCTCTTTGCCATGCATGTGGGCTTCCAGGGCACATTGCAGCAGAGTGTTCTTCCAAAGATCTCTGCTGGAACTGCAAAGAACCTGGCCACATGGCTAACAGCTGCCCAAATGAAGGGATATGCCGCAACTGTGGCAAGTCGGGTCACATTGCAAGAGAATGCAGTGCTCCACCAATGCTGCCAGGTGAAATGAGGCTTTGCAGCAACTGCTACAAACCAGGACACCTTGCTGCGGAATGCACCAATGAGAAGGCCTGCAACAACTGTAGGAAGAGTGGCCATCTTGCTCGTAACTGCCCTAACGAGCCCGTCTGCAACCTATGCAACGTGTCAGGACATTTGGCCCGAGAGTGCCCCAAATCTGATGCTATCAATGAGAGGGGTGGGCCTCCTCCCTTTCGTGGTGGCGCGCCTCCTCCCTTCCGTGGTGGATACAGTGATGTGGTCTGCCGTGCTTGCAATCAGGTTGGTCATATGAGCCGTGATTGCATGGCCGGTGCGTTCATGATCTGCCACAACTGCGGTGGTCGTGGTCACATGGCTTATGAGTGCCCATCTGGGAGGCTTATGGATCGGTTTCCCCCTCGCCGTTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSRSPPPKDRRIRTERTSYRDAPYRRDSRRGPSRFPNDLCNNCKRPGHFARDCPNVALCHACGLPGHIAAECSSKDLCWNCKEPGHMANSCPNEGICRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECTNEKACNNCRKSGHLARNCPNEPVCNLCNVSGHLARECPKSDAINERGGPPPFRGGAPPPFRGGYSDVVCRACNQVGHMSRDCMAGAFMICHNCGGRGHMAYECPSGRLMDRFPPRRF</aaseq>

Gene Sequence

<dnaseqindica>1..104#1133..1228#1929..2496#ATGAGCAGCCGCAGCCCGCCACCAAAGGACCGCAGGATTCGTACTGAGCGTACCTCATACCGTGATGCGCCATACAGGAGAGACAGCCGCCGTGGTCCTAGCAGGTTTGAGTTGTCTTGTTTAAATAAATAAAGAAAATGAGTATCTGGCACCGTATATCCTAATGTTGCCGCTTGCTATCAACCTCTCTTGATCATGTTGGCAGGATAACCATAATTGTCATTTCTGTTTGGATGTATATATTCTCTGTTTTTCTTCCACAATAATTACTTATGCATGTAGTATTTGTATAGCCTCTTGATCTAAGGCCATGAATCCATGACCTATGTTGCTCCAGTATGTAATATGGATAGGGCGACACTACATGTGGTCAACCCATTGCTGTAATCTAGGCTAAGGCAACAGTTAGTTTATCTTTTTCTTTAAAGGAGAAGTTGGTTTGTCTTCATGTCTTTTGTCTATATCTATACTCTATATACAATTCTAAAAGACTCCAGTGGTGGTGGCAGTGAATCTGCCACCACCACCTACTCACTGTCATGTGGGCCCATGACGATCCTACTTTCAAAATTTAAGCAACTTCTTCAGAGTTGGTCAATACCCAATATACTTCTCCATGACTCCCAAATTGTACAAGGTTCTCCAGTGTAGCAAGTGACCATTCCCTCTACAATGAATGAGGTCTCTAAAAAAGTGAAGAGTTTTCTCCTTTTAGATAAAATGAAGTTCCCCATTATGATGTCTATACTTACTATGCCTAGACTCGAATTAAAACAGTCGGGTATATGTATCAACTATCAATTCTAACATGTCCTGTTGAAACTCCTATAGTTTATTATTATTTCTTCAAAATCCATTACAACGCATAGGCACTCTGCTAGTAAAAGTAAAAGAGTACATGGAGTACGATGGACCTCATTCCCTTTATTGGACGATCACTTGGTTTAAGTGTGCAAAATGTTCAACAAGGCATAAGCTAATGTTGTTTCGTGATTTTCGGAAAACCCTCTCATGATTACATTAGTTTGTCATGATTCATGACCTGAAGAGTGCAATTTAATAAAAGATTCCTGTCAATCTGCAATGTATCTGAGCTTTTGTATCCTCCACTTCTTTGTTTTCTTCCCTGCAGATTTCCTAATGATTTGTGCAACAATTGTAAGCGTCCAGGACATTTTGCTAGAGATTGTCCAAATGTGGCTCTTTGCCATGCATGTGGGCTTCCAGGGTAAGGACTATTTGTTATTCTGTTTTGCAGATATTTCATGTTCTTATAGCCTTTAAAGAAGTCTTCCATTATTCAGTATCTATTTGTGGTGTACTTGTGTTTATTTTCTCTTATATTGTTTTGCCATGCTTTTAAAATTCTGTATTCTCAATAGCACTGCTTGTTTATGTCATTGTGTATTTAGAACCATATCCATCTAGATTACAAATGTGCAGTGAATGAGACGTGATCTCAATAATTGTGACAGTTCAACCGTAATGAAGTTGATGTTAGGTGAACATGATAGATGGCTACATTGATTTGCTAATATTTAACAGTTTTGAGGTACCCCATGCTCCTTTCGTGATGGATGAGACTTAGTGTTGGCATCACCAATTATTTGAGATTTGTTCCCAAAACACGAAACATGGTTCATTGTCTTTTAACAGTTCAATTTATAGTATGCATCTAATATTTTTTTATTAGCTTATTCATATTTATGACAAATCAGCAAAAGGTAGCTAAAGAAACTGAAATGTTGAAGCTTAAGCCATGCATAAAGTTGCCAGAAGATGGTTAGTAACAGTTAAGCAATAACTTGTGGAATTAAATAATTGTAATTTAAGTCACAGATTATAGTTTCATGTGATCAAGAATGCTTACATGCTTCACCTTCTTATCTGTGAGCTAGCATTACTTACTCTAATGCTTACTTTGGCAGGCACATTGCAGCAGAGTGTTCTTCCAAAGATCTCTGCTGGAACTGCAAAGAACCTGGCCACATGGCTAACAGCTGCCCAAATGAAGGGATATGCCGCAACTGTGGCAAGTCGGGTCACATTGCAAGAGAATGCAGTGCTCCACCAATGCTGCCAGGTGAAATGAGGCTTTGCAGCAACTGCTACAAACCAGGACACCTTGCTGCGGAATGCACCAATGAGAAGGCCTGCAACAACTGTAGGAAGAGTGGCCATCTTGCTCGTAACTGCCCTAACGAGCCCGTCTGCAACCTATGCAACGTGTCAGGACATTTGGCCCGAGAGTGCCCCAAATCTGATGCTATCAATGAGAGGGGTGGGCCTCCTCCCTTTCGTGGTGGCGCGCCTCCTCCCTTCCGTGGTGGATACAGTGATGTGGTCTGCCGTGCTTGCAATCAGGTTGGTCATATGAGCCGTGATTGCATGGCCGGTGCGTTCATGATCTGCCACAACTGCGGTGGTCGTGGTCACATGGCTTATGAGTGCCCATCTGGGAGGCTTATGGATCGGTTTCCCCCTCGCCGTTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031472