Os06g0284800

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Revision as of 09:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0284800| Description = Spectrin repeat containing protein| Version = NM_001063936.1 GI:115467603 GeneID:4340770| Length = 3403 bp| Definit...")
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Gene Name

Os06g0284800

Description

Spectrin repeat containing protein

Version

NM_001063936.1 GI:115467603 GeneID:4340770

Length

3403 bp

Definition

Oryza sativa Japonica Group Os06g0284800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:10119999..10123401

Sequence Coding Region

10120028..10120177,10120287..10120355,10120755..10121114,10122167..10122385,10123089..10123238

Expression

GEO Profiles:Os06g0284800

Genome Context

<gbrowseImage1> name=NC_008399:10119999..10123401 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:10119999..10123401 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgaccgatccctcaggccgccgcagccgcagcaggcggcggcggaggcggaggcgggccccggcggtggcgagggaggggggaacgtggatcgggtgctgttcaagaacctcgtcgagatggtgccgctcgtggagtcgctcatggaccggaggtcgaacccgtcctactcgaggcgcgcgtcgatggtgtacacgccggcgccggcgaagaagggttctgatttgaagagtgtgaagtcgccgcaaagtgtgtcggtgaaaaaacggagggatcctggagagacgggcaagaagagcaccgccgactccaatggtgagaatggcgcggttgcgccagtcggtctgttggggggagaaaataaacccaaggataaggatgagatcgttttgctgcgtgagcagatcgaagagttgcaaaagacgctgcttgagaaagaggaagcactgaaatccgcggagagtttggtgggtgagatgaatacattatattcgacagtagatgagctgagacgccaggttgctgacaaggaaggtttgatcaaatctatcaattctcagctgcacaatgcgaagattatgcttgcagacaagcaagcatcattagagaaattagaatgggaggtgaagacgtcaaataagaaagtagaagatcttcaaggggatgtctccaatatggagtttgagataggttcgttgatggcattattcgaaaaaatttcggagaatgtttcaggtgaactccaagatggtagcttgccatcatcttttgaattggaagcacttcaatcaactagcgaaatcgacaagattgaggttgagaagatagagcaagaagcggttacatatgccgaagctcttgctgcagcaagagagaacccaaacgaggagcagctgaatatagctgcggaagcacggttaaggctgcaggtccttgtgctatga</cdnaseq>

Protein Sequence

<aaseq>MLDRSLRPPQPQQAAAEAEAGPGGGEGGGNVDRVLFKNLVEMVP LVESLMDRRSNPSYSRRASMVYTPAPAKKGSDLKSVKSPQSVSVKKRRDPGETGKKST ADSNGENGAVAPVGLLGGENKPKDKDEIVLLREQIEELQKTLLEKEEALKSAESLVGE MNTLYSTVDELRRQVADKEGLIKSINSQLHNAKIMLADKQASLEKLEWEVKTSNKKVE DLQGDVSNMEFEIGSLMALFEKISENVSGELQDGSLPSSFELEALQSTSEIDKIEVEK IEQEAVTYAEALAAARENPNEEQLNIAAEARLRLQVLVL</aaseq>

Gene Sequence

<dnaseqindica>30..179#289..357#757..1116#2169..2387#3091..3240#ggtctgggattttgaaacggggaggcggaatgctcgaccgatccctcaggccgccgcagccgcagcaggcggcggcggaggcggaggcgggccccggcggtggcgagggaggggggaacgtggatcgggtgctgttcaagaacctcgtcgagatggtgccgctcgtggagtcgctcatggtgagtcgcgcttcggcgggtttcggagggggggcgcagatctcgtctcgcgtgatgtctgatgcgtgttgtttttttttttttggtttggtttgtgggatggatgcaggaccggaggtcgaacccgtcctactcgaggcgcgcgtcgatggtgtacacgccggcgccggcgaagaaggtggctcgccgcgcgcgctctctctctctctctattttattttgttttttttattttattttagccatttgctgttttggatggcggggatagggtagtttcgttctggtgccagtttgcccgtgttggagtttttatatggtttttgtgaatgttagtggttcaggtgtcagggtttagtggtcaggatttgcaatggggaatggggccagatatgtgtttttgaccctgttccgactaataatgtttgtatttgtgctgctatgatttgtagatagaggtagatcttgaaatttggtggcattgttgacaaaagtatgacatagatcgaatcttctccaagtgtttgtctctggtttttcatagtgatcatctatgatggatgggttgttcttgtagggttctgatttgaagagtgtgaagtcgccgcaaagtgtgtcggtgaaaaaacggagggatcctggagagacgggcaagaagagcaccgccgactccaatggtgagaatggcgcggttgcgccagtcggtctgttggggggagaaaataaacccaaggataaggatgagatcgttttgctgcgtgagcagatcgaagagttgcaaaagacgctgcttgagaaagaggaagcactgaaatccgcggagagtttggtgggtgagatgaatacattatattcgacagtagatgagctgagacgccaggttgctgacaaggaaggtttgatcaaatctatcaattctcagctgcacaatgcgaaggtgagtcagcagcccacctgccactacattgtcatattttccatctgtgaactagtaccctccttttccagatgcttatctactaattcttccaatttattgttatgtgtagagcattacttagtatgtttgtactatcacattgctgcagcgcatcatgcttaatgtgctcattctgatctctacagaatgtttgctttgtcattgtactcacaaaataaagaaaggaatgggatgattacaccagcattaaattgtcatgttgatttcaattcaagaaatcagagacaaataagagactatagggcagctgcctggaccagtactgctttgtattgtttcttgaatttaccaatagcggttctttgctttgttcttccattactaccctagttcttttcatatgttgtcctataatttacacaatgccacaatcattatttagaattttgaccagtcatattcatgaaagtatttagatttattacccttacatttttatatgatttgttgatatataataacaagcagcactaaaaacgtgcctattcaagctatccattcccagagcgacattactttcaggaaaaagaacagagtgagtgttactttcgatgatcgctaactaataatatagtccccaagggggattagagagtaatatgctctgaaattgtctactgtggcttgttatcgtgtccatgaggattatacggcctttaggactgtccaaaccaggtttacacaggcatggggaatgagaacatgctttcaaccttctgagcctcaacactcttaaatgagttgagggaaccatcttgtgcgaccctaccatcctttggacgattcaagattttgtcattgagttgaataaaatatgtatacttcatacgaagttctttttaatcaacttgttaatttactgactcactgatctcttgataatgatatgctcaacattggtaaactcttgtgtgctgagagttcttttcttgtgttaggtacctgtacatttttcatctgacatgtttgttctctactttattctgtagattatgcttgcagacaagcaagcatcattagagaaattagaatgggaggtgaagacgtcaaataagaaagtagaagatcttcaaggggatgtctccaatatggagtttgagataggttcgttgatggcattattcgaaaaaatttcggagaatgtttcaggtgaactccaagatggtagcttgccatcatcttttgaattggaagcacttcaatcaactgtaagtacacattcttggctgtacttcttgactgattcaagtgtaaccagagttcagatattgtcattgttgtatgccatcctatgtttttttttactaaggagtaaggatacagttgcaacatagcattctctgtataaaaacttttttaaaaaaattatggatataatactctatcatgtataaatttaagccagtaattgagtcagtagtatataaatgtaatggtgcttgaaaaccatgatacactagctaaatgtccgtgctttgctatggctaaaagaaaaaaaatatgataatatttccaaaataaataaagcatatctttcctgaaatatgttggccacctttatttatagagaatactcactttagtttaattttatatgtagctaaccatttagatttagctgttatgtatacttacgtgatattatgaagctcaagggctaatatgtacaaactacttagatgggatggcagattgaccgccactacttatatactcttttaaaggagtatagatattgaaaatcagcaacaacttttactatagtataatgggattaactttctggagatctgtaaatcatttggtcttacaacgttactatgaaggatattcactcaatgaatattgatgacattctgcattgaattttgatcagtcacttgaactaagcattacacatttttatgtcagagcgaaatcgacaagattgaggttgagaagatagagcaagaagcggttacatatgccgaagctcttgctgcagcaagagagaacccaaacgaggagcagctgaatatagctgcggaagcacggttaaggctgcaggtccttgtgctatgatgcgccaagtgcatattgtagtgtatgtgtatgataatgtcgaatcgctgatgtaattatgtgtgcgtgcttgatcgagtttatttcatgtgagaccgtactgacggtaatcgatcaagcaccagatactggacacttatttaattggagatgatgtttattc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0284800, RefSeq:Os06g0284800