Os06g0285400

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Revision as of 09:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0285400| Description = Similar to Serine/threonine-specific kinase like protein| Version = NM_001063939.1 GI:115467609 GeneID:4340773| Leng...")
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Gene Name

Os06g0285400

Description

Similar to Serine/threonine-specific kinase like protein

Version

NM_001063939.1 GI:115467609 GeneID:4340773

Length

2515 bp

Definition

Oryza sativa Japonica Group Os06g0285400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:10145889..10148403

Sequence Coding Region

10145997..10148093

Expression

GEO Profiles:Os06g0285400

Genome Context

<gbrowseImage1> name=NC_008399:10145889..10148403 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:10145889..10148403 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgctcctcccctccgcctccgcctcgccgtcgccttcttgtcgctccttctaacggtttctgcgtcggcggcggcggcgagcggtggtggtggtggtttcaatgttagctttgattcggcggcgctggccttctccgacctgacgctgctgggggactcgttcctgcggaatggctccgtcggcctgacgcgcgacaccgccgtgccgtcgtcctccgccggcagcgtgctctgcagccgcgccgtcgcgttcggcggtggcggaggatcggcggcgtcgttcgcggcgaggttctccttcgtcatcgccgagcagaacgccggatccaccggcggcgacggcatcgccttcttcatctcccccgaccacgccacgctcggcgccaccggcggctacctcggcctcttcaactcctcctcctcggccgccaagaccaacgcctctattgtcgccgttgagtttgatacgatgttgaacgacgagttcggcgacccgagcgacaaccacgtcgggcttgacctcggcttgccggtgtcggtcaacgccgtcgacctcgccgcgttcggcgtcgtcctcaacagcggcaacctcaccacggcgtggatcgactaccacggcgccgaccacctcctccaggtgtccctcagctactccgccgccaagccggcgaagcccgtcctctccgtggccgtcgacctctcgccgtatctcagggacgccatgtacgtcggcttctcggcctccacggaggggagcacgcagcagcacaccatcaaggaatggaccttccagacgttcggcttcccgtcggcgaccaactcctcttccttttcgaacaccaccggcaacgcgtcggcgcagactgtccccggcgaggcggccgcgggcggcgccgcctctcgcaagaagaggttcgggctcgccctcggcatcctcggccccgtcgcgcttgccgtctccttcgtcttcttcgcctgggtgtccatcaggaagctgatagagctcacctcccggaagaacgccggcttcttgcccgagctggtgaaggggccgaggaagttcagctacaaggagctcagcgccgccaccaggggattccacgcgagcagggtcatcggcaaaggcgcgttcgggacggtgtacaaggcggctatgccggggacggccaccgcatccgccgtctcctacgccgtcaagcgatccacgcaggcgcaccagagccggaacgagttcgtcgccgagctctccgttatcgcctgcctccgccacaagaacctggtccagctcgagggatggtgcgacgacaagggcgagctgctgctggtgtacgagtacatgcccaacggcagcctggacaaggcgctctacggcgagccctgcacgctgtcgtggccggagcggtacacggtggcgtccggcatcgcgtcggtgctgtcctacctccaccaggagtgcgagcagcgggtgatccaccgggacatcaagaccagcaacatcctgctcgacggcaacctcagcccgcgcctcggcgacttcggcctcgcccgcctcatggaccacaacaagagccccgtctccaccctcaccgccggcaccatgggctacctcgcgccggagtacctccagtcgggcaaggccaccgagcagaccgacgtgttcagctacggcgtcgtggtgctcgaggtgtgctgcggccgccgccccatcgacaaggacgacggcgggggaaagaacgtcaacctcgtcgactgggtgtggcgcctgcacggcgaagaccgcctcatcgacgccgccgacccgcgcctcgccggcgggttctaccgcgacgagatgctccggctgctgctcgtcgggctgagctgcgcgaaccccaactgcgacgagcgcccggcgatgcgtcgcgtggtgcagatcctgaaccgcgaggcagagccggtgcccgtgccgcggaagaagccgctgctcgtgttcagctccagcgcgtcgatcaagctgcaggagatcgcctttgcctgcggcgacgacgtccgcggcggccttccggcggcggccacgtcgccgaggtctgagggcggcgacattgaacgctag</cdnaseq>

Protein Sequence

<aaseq>MDAPPLRLRLAVAFLSLLLTVSASAAAASGGGGGFNVSFDSAAL AFSDLTLLGDSFLRNGSVGLTRDTAVPSSSAGSVLCSRAVAFGGGGGSAASFAARFSF VIAEQNAGSTGGDGIAFFISPDHATLGATGGYLGLFNSSSSAAKTNASIVAVEFDTML NDEFGDPSDNHVGLDLGLPVSVNAVDLAAFGVVLNSGNLTTAWIDYHGADHLLQVSLS YSAAKPAKPVLSVAVDLSPYLRDAMYVGFSASTEGSTQQHTIKEWTFQTFGFPSATNS SSFSNTTGNASAQTVPGEAAAGGAASRKKRFGLALGILGPVALAVSFVFFAWVSIRKL IELTSRKNAGFLPELVKGPRKFSYKELSAATRGFHASRVIGKGAFGTVYKAAMPGTAT ASAVSYAVKRSTQAHQSRNEFVAELSVIACLRHKNLVQLEGWCDDKGELLLVYEYMPN GSLDKALYGEPCTLSWPERYTVASGIASVLSYLHQECEQRVIHRDIKTSNILLDGNLS PRLGDFGLARLMDHNKSPVSTLTAGTMGYLAPEYLQSGKATEQTDVFSYGVVVLEVCC GRRPIDKDDGGGKNVNLVDWVWRLHGEDRLIDAADPRLAGGFYRDEMLRLLLVGLSCA NPNCDERPAMRRVVQILNREAEPVPVPRKKPLLVFSSSASIKLQEIAFACGDDVRGGL PAAATSPRSEGGDIER</aaseq>

Gene Sequence

<dnaseqindica>109..2205#actgtgctcctcgtgtccgccgttctgatctccattataccacctcggaatcccacggacaccgcgcgccccacataaccccatgacccggatccctccccgccacccatggacgctcctcccctccgcctccgcctcgccgtcgccttcttgtcgctccttctaacggtttctgcgtcggcggcggcggcgagcggtggtggtggtggtttcaatgttagctttgattcggcggcgctggccttctccgacctgacgctgctgggggactcgttcctgcggaatggctccgtcggcctgacgcgcgacaccgccgtgccgtcgtcctccgccggcagcgtgctctgcagccgcgccgtcgcgttcggcggtggcggaggatcggcggcgtcgttcgcggcgaggttctccttcgtcatcgccgagcagaacgccggatccaccggcggcgacggcatcgccttcttcatctcccccgaccacgccacgctcggcgccaccggcggctacctcggcctcttcaactcctcctcctcggccgccaagaccaacgcctctattgtcgccgttgagtttgatacgatgttgaacgacgagttcggcgacccgagcgacaaccacgtcgggcttgacctcggcttgccggtgtcggtcaacgccgtcgacctcgccgcgttcggcgtcgtcctcaacagcggcaacctcaccacggcgtggatcgactaccacggcgccgaccacctcctccaggtgtccctcagctactccgccgccaagccggcgaagcccgtcctctccgtggccgtcgacctctcgccgtatctcagggacgccatgtacgtcggcttctcggcctccacggaggggagcacgcagcagcacaccatcaaggaatggaccttccagacgttcggcttcccgtcggcgaccaactcctcttccttttcgaacaccaccggcaacgcgtcggcgcagactgtccccggcgaggcggccgcgggcggcgccgcctctcgcaagaagaggttcgggctcgccctcggcatcctcggccccgtcgcgcttgccgtctccttcgtcttcttcgcctgggtgtccatcaggaagctgatagagctcacctcccggaagaacgccggcttcttgcccgagctggtgaaggggccgaggaagttcagctacaaggagctcagcgccgccaccaggggattccacgcgagcagggtcatcggcaaaggcgcgttcgggacggtgtacaaggcggctatgccggggacggccaccgcatccgccgtctcctacgccgtcaagcgatccacgcaggcgcaccagagccggaacgagttcgtcgccgagctctccgttatcgcctgcctccgccacaagaacctggtccagctcgagggatggtgcgacgacaagggcgagctgctgctggtgtacgagtacatgcccaacggcagcctggacaaggcgctctacggcgagccctgcacgctgtcgtggccggagcggtacacggtggcgtccggcatcgcgtcggtgctgtcctacctccaccaggagtgcgagcagcgggtgatccaccgggacatcaagaccagcaacatcctgctcgacggcaacctcagcccgcgcctcggcgacttcggcctcgcccgcctcatggaccacaacaagagccccgtctccaccctcaccgccggcaccatgggctacctcgcgccggagtacctccagtcgggcaaggccaccgagcagaccgacgtgttcagctacggcgtcgtggtgctcgaggtgtgctgcggccgccgccccatcgacaaggacgacggcgggggaaagaacgtcaacctcgtcgactgggtgtggcgcctgcacggcgaagaccgcctcatcgacgccgccgacccgcgcctcgccggcgggttctaccgcgacgagatgctccggctgctgctcgtcgggctgagctgcgcgaaccccaactgcgacgagcgcccggcgatgcgtcgcgtggtgcagatcctgaaccgcgaggcagagccggtgcccgtgccgcggaagaagccgctgctcgtgttcagctccagcgcgtcgatcaagctgcaggagatcgcctttgcctgcggcgacgacgtccgcggcggccttccggcggcggccacgtcgccgaggtctgagggcggcgacattgaacgctagctgctgacactgatcactgaagcagagtaaaggataatactgagtatgaattactaatactagtgtgattcttatacacgattgatggattgtatttgtgatgtgctcctaaggggaatataagtaataatccccgctgttgtacgagttttgaaatacttatacatctaccactaccaaggtgtgtttcagcacgttgttcagacatcttgtgtgaaatatattgttagagacccacttcacttacttgaaacaatagcagtttcaaaagtaataccaatccagtacaaggagcaattgattctattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0285400, RefSeq:Os06g0285400