BGIOSGA031698

From RiceWiki
Revision as of 17:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031698

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031698, complete gene.

LocusTag

OsI_34012

Ensembl Transcript ID

BGIOSGA031698-TA

Ensembl Protein ID

BGIOSGA031698-PA

Length

2393

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16449692..16452084

Sequence Coding Region

16451773..16452084,16449692..16451524

Genome Context

<gbrowseImage1> name=IndicaChromosome10:16449692..16452084 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:16449692..16452084 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGTTGCAAGGTCGCGACATCCCGGCCACTGTGCGCGGCAACCTCTACCTGTCACGTCGTTGTTCAGGCTGGCCGATGCGACGCCCGCGTCGCGCCGCCGCCGGCTAGCTGTGCCGGGACCTCCTCTTACTGGTTGTGAGCAGAGAGATTCTACTCTCACAGTGTGCACTGTGAGGAATTCAACCCAGATTCCAGCCCGGCCCGGCCACTGTTTGGTTCTAGTTAGGCCTTTGGACCACGACCGTCTTGTCCGGTCCAGCACTCCAATCATTGATTCGAATTTGGACAAATTCCCACTCAAAAAACTGGACGAGAAATCGAGGAACCCAAGCTGGAAGGCGATCGGGTACGCCGCGCCTGCCGCCGCCGCCGCCGCGGTGGAGCAACGCAGACCGGCGTCGCCGTCGCGGCGGCCGCTCGAGGATGGCGTGGTGGAGACGAGGCGGATGGACGACAACGCCCTGCTCAGGTCGCTCGTGGAGAAGGGCCTCGCCGTGAAGACGGGAACGGCCGCGCACCACACGGTGCAGTGCGACGCCGTGGTCGTCGGGTCCGGCTGCGGCGGCGGCGTGGCCGCCGCCGTGCTCGCGTCGAAGGGGTACAAGGTGGTCGTCGTCGAGAAGGGGGACTACTTCGCCACGGAGGATTACACCTCCCTCGAGGGCCCGTCCATGGAGCGGCTCTACGAGAAGGGCGGCGTGTTCGGCACGTCCAACGTCACGACCATACTGTTCACCGGCGCCACGGTCGGCGGCGGCTCGGCGGTGAACTGGTCGGCGTGCATCCGCACGCCGGCGGAGATCAGGGAGGAGTGGTCGCGCGAGCACGGGCTGCCGGTGTTCGCGAGCACGGCGTACGCGCAGGCCATGGACGCGGTGTGCGATCGGATCAGGGTGACCGGCGGGTGCGAGGAGGAGGGGTTCCAGAACAGGGTGCTCCGCCGCGGCTGCGACGCGCTCGGGATGCGCGCCGACGCCGTGCCGCGCAACTCGTCGGAGGGGCACTTCTGCGGCAGCTGCAACCTCGGGTGCCCCACGGGGGACAAGAAGGGAACCGACACGACGTGGCTCGTCGACGCCGTCGAGCGCGGCGCGGTCATCCTGACCGGGTGCAAGGCCGAGCACTTCATCCTCGAGAGGAACGCCGGCGGGAGGGGCGGCCGGAGCAAGAGGTGCGTCGGCCTGATGGCGACGTGCACGAGCAGCGGCATCACCAAGAAGCTCCGCATCGAGGCGAAGGTGTCCATCTCTGCGTGCGGCGCGCTCATGACGCCGCCGCTGCTGCGCAACAGCGGGCTCAAGAACCGCCACATCGGCCGGAACCTTCACCTCCACCCGGTGTCCATGGCGTGGGGCTACTTCCCGGACAGCACGGCGGAGCTCCCGGGCAAGTGCTACGAGGGCGGCATCATCACCAGCATGCACCGCGTCACCGACCGCACCATCATCGAGACGCCGGCGCTCGGCCCGGGCGCGTTCTCCGCCGTGGTGCCGTGGGAGTCCGGCCGCGACATGAAGGAGCGGATGCGCCGGTACGCGCGCACGGCGCACGCGTTCGCGCTGGTGCGCGACCAAGGCGCCGGCGCCGTCGATGGCGAGGGCCGCGTCCGCTTCTCCCCGAGCCGCGACGACGTCGAGGAGCTCCGCGCCGGCCTCCGCCGCGCGCTGCGCATCCTGGTGGCCGCCGGCGCCGCCGAGGTGGGCACCCACCGCAGCGACGGGCTCCGCCTCCGGTGCAAGGGCGTGCGCGACGCGGACGTGGAGGCGTTCCTCGACGAGGTGACCATCGAGAAGGGCCCCATGTACCCGGGTTCCGACAAGTGGGCCATCTTCTGCTCGGCCCACCGAGATGGGCAGCTGCCGGATGGGCGCGAGCCCACGCGACGGCGCCGTCGACGGCGCCGGCGAGAGCTGGGAGGCCGAGGGGCTCTACGTCTGCGACGGCAGCCTGCTCCCGACGGCGGTGGGCGTGAACCCGATGATCACCATTCAGTCCATCGCCTACTGCCTCTCGAACGGCATCGCCGACACCCTGTCGCACTAGTGATCCATCGATCGATTTGTTACTATATCTTCGTATTTGTCGCCAATTCTGTAACAGGAGTTGTATCTTTCTTTCCTCAGACGGACCTCAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAVARSRHPGHCARQPLPVTSLFRLADATPASRRRRLAVPGPPLTGCEQRDSTLTVCTVRNSTQIPARPGHCLVLVRPLDHDRLVRSSTPIIDSNLDKFPLKKLDEKSRNPSWKAIGYAAPAAAAAAVEQRRPASPSRRPLEDGVVETRRMDDNALLRSLVEKGLAVKTGTAAHHTVQCDAVVVGSGCGGGVAAAVLASKGYKVVVVEKGDYFATEDYTSLEGPSMERLYEKGGVFGTSNVTTILFTGATVGGGSAVNWSACIRTPAEIREEWSREHGLPVFASTAYAQAMDAVCDRIRVTGGCEEEGFQNRVLRRGCDALGMRADAVPRNSSEGHFCGSCNLGCPTGDKKGTDTTWLVDAVERGAVILTGCKAEHFILERNAGGRGGRSKRCVGLMATCTSSGITKKLRIEAKVSISACGALMTPPLLRNSGLKNRHIGRNLHLHPVSMAWGYFPDSTAELPGKCYEGGIITSMHRVTDRTIIETPALGPGAFSAVVPWESGRDMKERMRRYARTAHAFALVRDQGAGAVDGEGRVRFSPSRDDVEELRAGLRRALRILVAAGAAEVGTHRSDGLRLRCKGVRDADVEAFLDEVTIEKGPMYPGSDKWAIFCSAHRDGQLPDGREPTRRRRRRRRRELGGRGALRLRRQPAPDGGGREPDDHHSVHRLLPLERHRRHPVALVIHRSICYYIFVFVANSVTGVVSFFPQTDLS</aaseq>

Gene Sequence

<dnaseqindica>1..312#561..2393#ATGGCGGCGGTTGCAAGGTCGCGACATCCCGGCCACTGTGCGCGGCAACCTCTACCTGTCACGTCGTTGTTCAGGCTGGCCGATGCGACGCCCGCGTCGCGCCGCCGCCGGCTAGCTGTGCCGGGACCTCCTCTTACTGGTTGTGAGCAGAGAGATTCTACTCTCACAGTGTGCACTGTGAGGAATTCAACCCAGATTCCAGCCCGGCCCGGCCACTGTTTGGTTCTAGTTAGGCCTTTGGACCACGACCGTCTTGTCCGGTCCAGCACTCCAATCATTGATTCGAATTTGGACAAATTCCCACTCAAAAAAGTAAAAAGGAGTCTGGACAAATTCTACTTTGGGTTATGAATTTTGTAGATTTCAGTACCATTCTTGAAAATATATTGTATTTTCTATTGTAAAATTTAATACTTTCAAGTAGTATTTTGAGGTTACAAAAACTTTAACGTAAAACTTAGATATCTAGAATTTAGATATCTAGAGGTTTTCTCAATGATCATAAAATTTCTCATTTTTTGTAATTCGTTTAATTTGAGTGTAACCCGGTTTGGATGCAGCTGGACGAGAAATCGAGGAACCCAAGCTGGAAGGCGATCGGGTACGCCGCGCCTGCCGCCGCCGCCGCCGCGGTGGAGCAACGCAGACCGGCGTCGCCGTCGCGGCGGCCGCTCGAGGATGGCGTGGTGGAGACGAGGCGGATGGACGACAACGCCCTGCTCAGGTCGCTCGTGGAGAAGGGCCTCGCCGTGAAGACGGGAACGGCCGCGCACCACACGGTGCAGTGCGACGCCGTGGTCGTCGGGTCCGGCTGCGGCGGCGGCGTGGCCGCCGCCGTGCTCGCGTCGAAGGGGTACAAGGTGGTCGTCGTCGAGAAGGGGGACTACTTCGCCACGGAGGATTACACCTCCCTCGAGGGCCCGTCCATGGAGCGGCTCTACGAGAAGGGCGGCGTGTTCGGCACGTCCAACGTCACGACCATACTGTTCACCGGCGCCACGGTCGGCGGCGGCTCGGCGGTGAACTGGTCGGCGTGCATCCGCACGCCGGCGGAGATCAGGGAGGAGTGGTCGCGCGAGCACGGGCTGCCGGTGTTCGCGAGCACGGCGTACGCGCAGGCCATGGACGCGGTGTGCGATCGGATCAGGGTGACCGGCGGGTGCGAGGAGGAGGGGTTCCAGAACAGGGTGCTCCGCCGCGGCTGCGACGCGCTCGGGATGCGCGCCGACGCCGTGCCGCGCAACTCGTCGGAGGGGCACTTCTGCGGCAGCTGCAACCTCGGGTGCCCCACGGGGGACAAGAAGGGAACCGACACGACGTGGCTCGTCGACGCCGTCGAGCGCGGCGCGGTCATCCTGACCGGGTGCAAGGCCGAGCACTTCATCCTCGAGAGGAACGCCGGCGGGAGGGGCGGCCGGAGCAAGAGGTGCGTCGGCCTGATGGCGACGTGCACGAGCAGCGGCATCACCAAGAAGCTCCGCATCGAGGCGAAGGTGTCCATCTCTGCGTGCGGCGCGCTCATGACGCCGCCGCTGCTGCGCAACAGCGGGCTCAAGAACCGCCACATCGGCCGGAACCTTCACCTCCACCCGGTGTCCATGGCGTGGGGCTACTTCCCGGACAGCACGGCGGAGCTCCCGGGCAAGTGCTACGAGGGCGGCATCATCACCAGCATGCACCGCGTCACCGACCGCACCATCATCGAGACGCCGGCGCTCGGCCCGGGCGCGTTCTCCGCCGTGGTGCCGTGGGAGTCCGGCCGCGACATGAAGGAGCGGATGCGCCGGTACGCGCGCACGGCGCACGCGTTCGCGCTGGTGCGCGACCAAGGCGCCGGCGCCGTCGATGGCGAGGGCCGCGTCCGCTTCTCCCCGAGCCGCGACGACGTCGAGGAGCTCCGCGCCGGCCTCCGCCGCGCGCTGCGCATCCTGGTGGCCGCCGGCGCCGCCGAGGTGGGCACCCACCGCAGCGACGGGCTCCGCCTCCGGTGCAAGGGCGTGCGCGACGCGGACGTGGAGGCGTTCCTCGACGAGGTGACCATCGAGAAGGGCCCCATGTACCCGGGTTCCGACAAGTGGGCCATCTTCTGCTCGGCCCACCGAGATGGGCAGCTGCCGGATGGGCGCGAGCCCACGCGACGGCGCCGTCGACGGCGCCGGCGAGAGCTGGGAGGCCGAGGGGCTCTACGTCTGCGACGGCAGCCTGCTCCCGACGGCGGTGGGCGTGAACCCGATGATCACCATTCAGTCCATCGCCTACTGCCTCTCGAACGGCATCGCCGACACCCTGTCGCACTAGTGATCCATCGATCGATTTGTTACTATATCTTCGTATTTGTCGCCAATTCTGTAACAGGAGTTGTATCTTTCTTTCCTCAGACGGACCTCAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031698