Os06g0296500

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Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0296500| Description = Thaumatin, pathogenesis-related family protein| Version = NM_001187804.1 GI:297724738 GeneID:9271559| Length = 1547 ...")
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Gene Name

Os06g0296500

Description

Thaumatin, pathogenesis-related family protein

Version

NM_001187804.1 GI:297724738 GeneID:9271559

Length

1547 bp

Definition

Oryza sativa Japonica Group Os06g0296500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11023711..11025257

Sequence Coding Region

11023711..11023831,11023873..11024124,11024885..11025055,11025108..11025164,11025241..11025257

Expression

GEO Profiles:Os06g0296500

Genome Context

<gbrowseImage1> name=NC_008399:11023711..11025257 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11023711..11025257 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgcgccggcgcgctgtcctgctccgtctccggcgagccgcccgccacgctgacagagtacacgctcggctcccgaccccgacctgtcgctcatcgatgggttcaacatgctgcacggggcgcgagtcgagctgcgccgtggacatcacggcgaggtgcctccccgagctccgtgtcccaggtggttaagttcgagcacgtctgcccgctgacgagctactccatgttcttcaaggggctctgccccgacgcctacagctatgccaaggacgaccagaacagcaccttcacctaccccgtcgacaccaactactacgtcgacttctgcccgccgacgagcggcatgacggctggcgacgacaacgggaggcgggtgggtggtggccgggtttggtgcggagcaggccgcggcggtggctggcggaggcagagcgcgcggtacgtgctcgatgaaatgctcagcgggaatccgtgcccattattgctagaagaaaaatcgcccccttcggaggtgctcgacgagtgttcgacgaaagcccagtttgctcggcaggactgcgctgctgatgcgggcgctgctcagtttgtgccagaattgatgctcacatag</cdnaseq>

Protein Sequence

<aaseq>MGNCAGALSCSVSGEPPATLTEYTLGSRPRPVAHRWVQHAARGA SRAAPWTSRRGASPSSVSQVVKFEHVCPLTSYSMFFKGLCPDAYSYAKDDQNSTFTYP VDTNYYVDFCPPTSGMTAGDDNGRRVGGGRVWCGAGRGGGWRRQSARYVLDEMLSGNP CPLLLEEKSPPSEVLDECSTKAQFARQDCAADAGAAQFVPELMLT</aaseq>

Gene Sequence

<dnaseqindica>1..121#163..414#1175..1345#1398..1454#1531..1547#atgggcaactgcgccggcgcgctgtcctgctccgtctccggcgagccgcccgccacgctgacagagtacacgctcggctcccgaccccgacctgtcgctcatcgatgggttcaacatgctggtgagcttccagctgaccaacggcggcgacgccgggttcagcacggggcgcgagtcgagctgcgccgtggacatcacggcgaggtgcctccccgagctccgtgtcccaggtggttaagttcgagcacgtctgcccgctgacgagctactccatgttcttcaaggggctctgccccgacgcctacagctatgccaaggacgaccagaacagcaccttcacctaccccgtcgacaccaactactacgtcgacttctgcccgccgacgagcggcatgacggctggcgacgacaacggtgtgcgtgacgggcggcgactcctgtggctaagctgccggatttgtgcaaccgcacggcggtggtcctcctcccgcctctcgcctgcttcggcgcccacctgcccgtccgctcaccgggaagaagagagagagaggagagggaagaagagaggagtgaggatgaggaagaatagagaagggagagggaagaaaggagtgaggctgacatgtgaggctcccgtgggccccaccatttttaaattattattttttggtgtaactgatatttggccccacggtttttattattttttggatagaattgtcacaagcgccacgtcaaatgacacgtgggatgaagaactagtcaaaccagccacgtaagcaccacgtcagcaaaaaccacctttcaaaccgccgagggacctcgtatgtatcggttttgacagtttaggaccggttgtttctggttttggagttcacggatgaaaatcggattcggtgtaaagttaagggacctcggatgaacttattcctttggtccgtaggttcaaaagtttggcccaagtatggtacgtaaataaattcggcccaaagcggaaatggtgggcgtagatttcacaacagatcacgcaggcgcaacccgccgcacaacgccggcgagcgcgcgaggcggactcactcggtcactcctcgcttcgatctgtgtaagtatctgcttcgatcatgctacagtttctttcccgctgcggattttgatttttgacacgcggttgcagggaggcgggtgggtggtggccgggtttggtgcggagcaggccgcggcggtggctggcggaggcagagcgcgcggtacgtgctcgatgaaatgctcagcgggaatccgtgcccattattgctagaagaaaaatcgcccccttcggaggtgctcgacgagtgttcgacgaaaggtgtacaaggacgcggcagccttgtaacggcagtgttgtgatttttctgcagcccagtttgctcggcaggactgcgctgctgatgcgggcgctgctcagtttgtgccaggtgcgtctcctctcctacttcgattttcttgcttgttgaattgctgatgcccatgatgatttcatttgttcaatagaattgatgctcacatag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0296500, RefSeq:Os06g0296500