Os06g0300000

From RiceWiki
Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0300000| Description = Glucose/ribitol dehydrogenase family protein| Version = NM_001063983.1 GI:115467697 GeneID:4340820| Length = 4477 bp...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0300000

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001063983.1 GI:115467697 GeneID:4340820

Length

4477 bp

Definition

Oryza sativa Japonica Group Os06g0300000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11238412..11242888

Sequence Coding Region

11238657..11239010,11241628..11241697,11242165..11242838

Expression

GEO Profiles:Os06g0300000

Genome Context

<gbrowseImage1> name=NC_008399:11238412..11242888 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11238412..11242888 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggcagcgccgccgccgccgccgccgacgccgtcctccggcagcagcagccgccgtggcccttcgtcgcgttggtcatcgtcggcgccatccacgtcgcggcactcgccttccgcctcgcctcccacctctgcctctgcctgcgccgcccgcgcgacctccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctccgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggccaagctccgcgacgtctcggaggccatctccaagctgggcgacggaggcgtggagaccaggagcgtggtgttcgacctggccctggcgtccaccgcggagggggacgaggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtggtgaacaacgcgggcgtggcgcggccgtgcgcggtgtacctgcacgaggcggaggcggaggcgtgggtgaggatgatacgggtgaacctgtgggcggtgacggaggtgacggcggcggtgctgccggggatggtggcgcgggggaggggcgccgtcgtcaacatcggctccggctccacggaggccatcccttccttcccactctactccgtctacgccgccactaaacggtacgttgctgagttctcgaggagcctttacgtggaatacaagagcaaaggaatcgacgtgcaatgtcaggctccgctgttcgtggcgaccaacatgacctccggcgtcgcgaaggccggcggcggcggcgacgacgccgccgccaaggggagcaagcggcggcagcggcggtggctctcgccgctgttcgtgccgaccgcggacgcctacgcggcggcggcggcgcggtggatcgggcacggcgcggtgtgcatgcccaacctctgccaccggctgcagtggtgcgtgtcccgcgccgtgccggacgccgtccacgaccgtgtccgcctccgggagaacctccgccagagggccctcttccagcggctgcgtcgccggccgccacctcctgatgatcaaccaaaggcaaagatcgatggttga</cdnaseq>

Protein Sequence

<aaseq>MGGSAAAAAADAVLRQQQPPWPFVALVIVGAIHVAALAFRLASH LCLCLRRPRDLRRRYGAWAVITGPTSGIGRSVALELARRGLNLVLVGRDPAKLRDVSE AISKLGDGGVETRSVVFDLALASTAEGDEAVRRLREAVAGLDVGVVVNNAGVARPCAV YLHEAEAEAWVRMIRVNLWAVTEVTAAVLPGMVARGRGAVVNIGSGSTEAIPSFPLYS VYAATKRYVAEFSRSLYVEYKSKGIDVQCQAPLFVATNMTSGVAKAGGGGDDAAAKGS KRRQRRWLSPLFVPTADAYAAAAARWIGHGAVCMPNLCHRLQWCVSRAVPDAVHDRVR LRENLRQRALFQRLRRRPPPPDDQPKAKIDG</aaseq>

Gene Sequence

<dnaseqindica>3879..4232#1192..1261#51..724#agatccagcatccaggcggctactcgattcaatccgcggcgagagtgaggatgggtggcagcgccgccgccgccgccgccgacgccgtcctccggcagcagcagccgccgtggcccttcgtcgcgttggtcatcgtcggcgccatccacgtcgcggcactcgccttccgcctcgcctcccacctctgcctctgcctgcgccgcccgcgcgacctccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctccgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggccaagctccgcgacgtctcggaggccatctccaagctgggcgacggaggcgtggagaccaggagcgtggtgttcgacctggccctggcgtccaccgcggagggggacgaggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtggtgaacaacgcgggcgtggcgcggccgtgcgcggtgtacctgcacgaggcggaggcggaggcgtgggtgaggatgatacgggtgaacctgtgggcggtgacggaggtgacggcggcggtgctgccggggatggtggcgcgggggaggggcgccgtcgtcaacatcggctccggctccacggaggccatcccttccttcccactctactccgtctacgccgccactaaacggtatactaattaatgctaattatctttgtttgtgtcttactaatattccccacaaaaattacttttgtgcattctaatagtatatataaaagcatattaatctcggcaattttgaataatagctagcagtttgggcaaatatatttgttttgccatcagactaattgaacggtgttcttgtgttcttcagtatctgaagatggttaatgacttcagtatctgcccaatgccatcagactaattaatgttggatttaaatcatttgacgagcaatgcatcatatcctgatatatggagtacactcgcttaataatgatgtattaaatatagtactagctagtactactcgatataattggagtgtccagtatactgctctaattggattcaatgttctgtatccacaattccatatgctagctggttttaattttttttttcttcttgtactttcacttacgctgcaggtacgttgctgagttctcgaggagcctttacgtggaatacaagagcaaaggaatcgacgtgcaatgtcaggtatatattgtactcttgtttaagtttttagaaaacaattttttcatgtattgctggtggtttgacgaacgctttcatctgttcgcttctcaaaatggggatgactagaaataaccggtcgatcaaatttagggctactttaaaacgtatgatttaaaagcacacgagaaaaatcatacgaataggatatcatgtcaataaatcctacatgaaatatatttaataggattttgaataattattgtttgataatactcctttcgttttacaatgtaagtcattttagcattttccatattcatattaatgttaataaatctagatatatatatctatctagattcattaagtgggaaatgatagaatgacttacaatttgaaatggaggaagtactagaggtgggtacaattacttctcgaaaaccgagcaccgatccaacccgaacagtcgggttttctcggtctttcgttttcctttttccaaacttggctgtgtttagtttctgaaattggagagaaatttgaggaaagttggtagtttggaaaaaagttaggagtttatgtgtgtaggaaagttttgaatgtgatgaaaaattgggagttggggaaaagtttggtgtgaactaaacacacccttgtcggtttgatgttgctagaaaccgataagcccataaaaactgaacgcatctgtatcttcatgtaggattaatcaattcaatccccaatttaggaataattacctattagacactcttataaatggtaattaaagatttatcactggaatcatatgtcattaacacatgaggacccacatgttatagacagcaagtggcaaatgcctaattgccacatttaaaagtggaaaaaatttaaatgccccttgggtaaaccgaaaaggccaaaccgaagtagttcgatttgttttgctcggttttagttccttttttttcttagcaaattcggttcgtatttcttgaaaaccgaactttcagcaaacttaagaaaccgaaccgagaaaaccatataaactaagtgctaagtgcccagccctagataataccataagaaaagtaaaggaactttgagtcataaggatgagaaaacatgtggtcaagccttatgttagtttttttttctaaaattccttcaaagtgagcaatttcataggaatttcaaagaattttagagaagcaattcctatattccctaaaaaaatttggattttggagaagcaattcctatattccctaaaaaccatgtagggaaatttttcaatggatccaaatcctttagaattcctctacttttccttaagggcatgtttagctccaaaaacatcacatcgaatctttaaacgtacgtatggagcattaaatattagataaaaagaaaaactaattgccagtttgcatgtaaatcgcgagatgaatcttttgagcataattagtccatgattagccataagtgctacagtaacccacatgtgctaatgacggattaattaggttcaaaagattcgtctctcggttttcaggcgagttatgaaattagttttttcattcgtgtcaaaaaccccttctaatatccggtcaaatatccgatgtgattcccaaaattttttattttaccaactagccttaagttccaacaattaatttgatgcacaccgtaccgtcaaatccttgccagcccaactgtcattaattagtagggtccatcctctgatccacgcatgtgaaactgcagtatattcacgtggtgagtgacagtgtaacagcgaaagtaaacaaacaaccatgtgttgatttggaagttggaacttgattcaagtcaaaaggcgccgatcctatatatttatatgagtaaattttataaaatcacgtatacttttattaatttattgtaaaactatctataaatcagacgctaatagttttcttatttcacgtgttcatacttaatttttatcttcagtgaactcaaacatgagcttagttttgaagttataaagaacgacagatttaagccatacctgatactccgagataagccatatcatcatagtataactttttgtcacttgatgatcgttcaaggtgcagaatatgtatataaaacataatctattaatgaacagttttgttatacatatgttgacaaattttattttaaaaatttgacagttacaaatatagaataattatattgtaagttgtatataaatacaatacaacttgtatattaaaatcttgcagtaatatgctattttcacgaagcgaggttatgggaccaaatctctttatgtgcacgttgtgatttttttcttctccacttacacaaatttaaagtaaatctaacagttttaaatttatataaaaagttatatatcatttatattgtagttatatgtaagttataatatgagtatattataattgtactaaatttacgtttgataaccttttagaagaaaatttatcgataaatttttcaactttctaagtcgtgaggagggttgaagtacctgtgtccataaaccctcttttatgtcataactgtgatagtcctattaactaatggtacacacgaacgcgatgtacgcgcatgcttgcaggctccgctgttcgtggcgaccaacatgacctccggcgtcgcgaaggccggcggcggcggcgacgacgccgccgccaaggggagcaagcggcggcagcggcggtggctctcgccgctgttcgtgccgaccgcggacgcctacgcggcggcggcggcgcggtggatcgggcacggcgcggtgtgcatgcccaacctctgccaccggctgcagtggtgcgtgtcccgcgccgtgccggacgccgtccacgaccgtgtccgcctccgggagaacctccgccagagggccctcttccagcggctgcgtcgccggccgccacctcctgatgatcaaccaaaggcaaagatcgatggttgattggtcattggtttagttagctcgttagctagcctcgcgcgctgcatatgtagctatagctatatagctagctcgttgggtgtttctgcctgagctctctgatgagtgatgactgattgagcagaggtgtaaaactagcgtaattataaaaaaaataaataagccgaacattaaaattgggcatggaaactcatgattgaaaccgaagtagtaggttctaatctgtgagtattaattaattagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0300000, RefSeq:Os06g0300000