Os06g0300700

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Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0300700| Description = Conserved hypothetical protein| Version = NM_001063987.1 GI:115467705 GeneID:4340824| Length = 5474 bp| Definition ...")
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Gene Name

Os06g0300700

Description

Conserved hypothetical protein

Version

NM_001063987.1 GI:115467705 GeneID:4340824

Length

5474 bp

Definition

Oryza sativa Japonica Group Os06g0300700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11277863..11283336

Sequence Coding Region

11278160..11278350,11280109..11280189,11280558..11280606,11280712..11280820,11281600..11281652
,11281799..11281861,11282642..11282989

Expression

GEO Profiles:Os06g0300700

Genome Context

<gbrowseImage1> name=NC_008399:11277863..11283336 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11277863..11283336 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtgcggcggtggaggactcggcggcggcggcgcccgttgtggcgccggagtccgctgccgagggagaccagcgtgtcgagggcgcggctggggaggattcggtggggcccgctgtggcgcccgaagcatccgtcgattcggatcagcatatcgaggatgcagccacggaggacgggaagcatggatctacagaggaaaatttcgatgtctctcctgaggaaatgagatcagtcatagaaattatagctgacacgggaaagttctggcatgattggagctttctcaagagattgctgtctctccaattgaagcaggtcttggctgaatattctgagggtcaagtggtgagccaagaggatgggcagctacagaattctttctctggggagacatactccgagcttgtcatctggctcaatgatgctctcttgaggttcgaagaaggtcctccatttacactgcaaaggctatgtgagattttgttggatccaaaaggaacatatactaaactgccaaagcttgctttggccttggaaaagaacctcctggtcacatctacaatgaccaagtgcactgatccatacccagctgctcatgtgtcaaatttagaagctacagtaatgacagagaacaccagcgctgttgaagtagaacctgaaaggctgccggaacatcctgcagcagtaccgaatggaaatgtaggaggtgatgctgatgcagaaatggctgatgcggaggttgaggagccatcgaatagccacgatgtcgagatgcaggaggacaagcctgaccagatttcaaatgttaaccctggtgctacctcagatgctgcagttactgcagaaacagttgatgctagtgaaaaatcatcagatccgcagacatga</cdnaseq>

Protein Sequence

<aaseq>MEGAAVEDSAAAAPVVAPESAAEGDQRVEGAAGEDSVGPAVAPE ASVDSDQHIEDAATEDGKHGSTEENFDVSPEEMRSVIEIIADTGKFWHDWSFLKRLLS LQLKQVLAEYSEGQVVSQEDGQLQNSFSGETYSELVIWLNDALLRFEEGPPFTLQRLC EILLDPKGTYTKLPKLALALEKNLLVTSTMTKCTDPYPAAHVSNLEATVMTENTSAVE VEPERLPEHPAAVPNGNVGGDADAEMADAEVEEPSNSHDVEMQEDKPDQISNVNPGAT SDAAVTAETVDASEKSSDPQT</aaseq>

Gene Sequence

<dnaseqindica>298..488#2247..2327#2696..2744#2850..2958#3738..3790#3937..3999#4780..5127#gccacctcccgcacacctcgtcgccctcctcctccgccggcgccgccgccggcgacaaggctgcaggtgagcgcactcctccgctgcaccaccacggacagccactgtccaccgcagcaacccccgccgtaaccctaaatctcgggcaccttgcgccagcgccctatctgctcttcccgcttctacgaaccctagccgcaaccaccccccggcccgtgcggtgcggcgtcctactcctgcgtgcttggttctggctaataattgctcccatccttgcagttactcgaagggctggcaatggagggtgcggcggtggaggactcggcggcggcggcgcccgttgtggcgccggagtccgctgccgagggagaccagcgtgtcgagggcgcggctggggaggattcggtggggcccgctgtggcgcccgaagcatccgtcgattcggatcagcatatcgaggatgcagccacggaggacgggaagcatgggtgagtgatgcaaaattacgctgttgttgattggatctgtagaactagctttcaatgagtgttagctagcgactagatgcgtatttagttgggcattataaggatatccatgtggtgtgtgcgtaatgattgagtgccagctgctactaatggatttgcgcgacgctgtttctttacatcgtgaagttaaactggctagatagatgcatatcagcaaccatgaatagcgaatgcaagaaaagcgaggagtgactgtaggaaatcatgcaaggtcatttcatcatcagcatgagatgattctacccattgcataggcaaataatgcacatattttcagtacccgatgggtctttgtcgcatccttattttgtctcctcgcttacaacatgggttgcaaatgaagtgtacatccaacaccttttccagtggagcttcttgtctactttaatagatttatcaaactgcgccatctatgcgccacacattccttttgcataccgaaccaagatgaaatagatgacgttgtgtttttttttaaaatttgcttccactgttggcttgtagctttgttcagtatgcctgaatgggactaattttctactttctaggttcctcgcatccaaaatgagcttgtatcttatagtaatttctatatatttttaacatattccctaccgtttaggcttttaatttgaatgaaggattatttaaaatagcatatggctttatatcaaactaaacacctttagagcatatttactccattttataatatgggcacacagtttctatgcaactactgaaagcagaagaatcaggagtctcctccttttcttcatcaattgtatttggttaaatttactgaaatatgtaatgattagtgtacattcccaactcactataagctgaacatttttttcttgtgtcacatccaatagataatatgtccagttaaatagggtgcttctttcatagtctagaaacttcaactttggccactggtttgcaatgactttcagaatagcagtttgatgctgttttaggatatgttaatatcatttttcatatattcaatgatatgttgtaggttaaaattcgaatactttgactacatgctttccacagtgatacctttttgttggaggggacacttgcaatgttttcacgttgttgaataatgttgaaatttcataaattcgagataaatccatctgggctacggtgcttgtttgacttcatatgaaattgcattgcttgaaaacatattcttatactaaatgcctgtgctttgctatggataaattaaaggtaaaatatcataaaatttcctaaaataagcaataacattttttacatgaaatatatgtgttacccactttttttgctatagggagtactcaccttaattttattttatatgtgtctatcgacttagttttagtttttatataatattaagaagtccaaggggtaatatgtaaaaactacaataggagtaggtggggtggcagattcactgccaccaccattggagtctttttaaggagtatagaatttccttattaatatggcagcataactactgtattggcgtttcaattttgttgattcttggaagtaaagtagataatttattaaccttacaggttttgaaaagcaaaaaaaaaaaaaattccacgtattggtttacaattaattgtatccagctccttcttttggctttgtttctgaaaattagcagaatgtattttgttgcagatctacagaggaaaatttcgatgtctctcctgaggaaatgagatcagtcatagaaattatagctgacacgggaaagttctggtattacttgatctactgtcccttaggtttcatccctggtcaaatttggatatcttagtcttatttaaaggtctttggatattgaaaacaatgcatctgctaatctgccataaagatttcagttttattcatcatcttgaacagatgatttgttataataggttggtagctagcagcctagcacctagcatttgaaaatcagtactaatttcagtgctagttctgctgatgcttagtgaaccaaaaacacattaagctggtttagttaagttttaattatcaagagattgatgcttgttgatagcatcagggaaaaaacaagtagtagggtatttcttttcccttgagattaacttcttacttttcaggcatgattggagctttctcaagagattgctgtctctccaattgaagcaggtatggggaggtatgccaccaaaaggagtttatgttgaggattattgttcttagtatgtttaatcaaagtacagtacttcaacattcattgttcctggtatgaaggtcttggctgaatattctgagggtcaagtggtgagccaagaggatgggcagctacagaattctttctctggggagacatactccgagcttgtcatctggctcaatgatggtactgttatgaatctttaatctatactacttaaaatattagtagtggtggtgttcattcccacatcacctttaccactgacatgtgggccccacaatctatactattacatcacctttcaatgagttctcccttttcactattagctctccccgaatttcaaaatcacttactttttccataaggaaaatcatagtattacttggactaaataagtgcttattaattgatttaataaggtagaaactttcggttgcaacgcatgggctctaggctaggctagtttgttaaatgttcacatttcttctctcactaaatgcaagtttagattcatcacggtttgtaatcttacattgattgtcttgtagtttttgtgcattaccgtagcttacagtcatcaataacttgaaatacattttaacactgaaggaccaacgtttgaaatattgactgtcttgcataacttgatgcaaattatattttgttgtaaatgattaaatagcttttgtactgtaatgcagtggtatattgcattgttttgttcatttatgtcgagcatggtttagatgggagtagcatttggtggattttgaatcttttttgttagtattccatagtgtgttatactagtccattgaaaattgttctttactggaggtcatacaagaccttgcacctttagtgttttttctacaggccacctttccatcattcctgacctgcattttatcgagcatacacaaatcactaatttctttttaaaaaaaaaatgtttgcagctctcttgaggttcgaagaaggtcctccatttacactgcaaaggctatgtgaggttatgaataatctatttaaaaattctctttagtggttcgatgttggtagtgcagttatttcgaaagaatgttctgttgtttcataatctgttttggacttgcattgctttgaattcacatacttacattagttttatatttgcagattttgttggatccaaaaggaacatatactaaactgccaaagcttgctttggccttggaaaaggtttgttagctgagctttctgttttgcagaatatatcagattatgtggttcctttgttatgttgcagtgcaatgtatgactttaatttgttgatctagagcccaattagatctacctagtgaactacaccttgaaaataatgtctaatagcttacaactcacttcactcaactcaaatagatcttgtggagacaaatttttatcatcatgtaaaagaaatcaatagaccatctgtgggtgcataaattataaatttttatgttggacctcaggttttcctttaattgtgccactaactgagaatctaatggctgcattcctctgcataacttggttgattaaaatgtgtgaggttattttgtatctccgcccatttaggtaaatatagccttttttattactagaatgctcaagttatatatttctggataacctagccatttcgtgtgtatgataacaatagatgcaacatagtgacaatgcttgcatgttttttgaaagatttaactgatgatcttgtcaaaaaaagatttaactgatgttatgatcttgaaaccaaagtacaatattttcactcaaggtaatgtctttgtatattaagttttgtctagacagtatcacataggtcactgaacttaatctcagaattgaaatctgttataagaagggcagatcaaatctgtttttgttttccttcagtgcacattatcatgcaaaatattactgagtttaatctatcaagatttcttcattaccaactgtaagctctcttatttgcagaacctcctggtcacatctacaatgaccaagtgcactgatccatacccagctgctcatgtgtcaaatttagaagctacagtaatgacagagaacaccagcgctgttgaagtagaacctgaaaggctgccggaacatcctgcagcagtaccgaatggaaatgtaggaggtgatgctgatgcagaaatggctgatgcggaggttgaggagccatcgaatagccacgatgtcgagatgcaggaggacaagcctgaccagatttcaaatgttaaccctggtgctacctcagatgctgcagttactgcagaaacagttgatgctagtgaaaaatcatcagatccgcagacatgagcttacaacagagaccagaagccctagtgcatgtctcattagtaatcattgccacccttgattcagcaacttagctcgatgcagatggcagattgtgctatgtgacgttaaagtttttgtgggccatgataaacatggggtaggtgagtataacgaccattttaaatcctaaaaaaaaagaaatgtattttgagtagaaatggatgtgaaaaattttcactgattgtcgttccggttgtcaaaatatgttgtaccccaatgttagtcaaaggagttgtcggctgccgttttgcccttgcactggtgaaattatgcatcacaagaatgtgagcttactatttttcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0300700, RefSeq:Os06g0300700