BGIOSGA032198

From RiceWiki
Revision as of 17:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA032198

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032198, complete gene.

LocusTag

OSJNBA0040E17.25

Ensembl Transcript ID

BGIOSGA032198-TA

Ensembl Protein ID

BGIOSGA032198-PA

Length

3102

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5482478..5485579

Sequence Coding Region

5484958..5485579,5484267..5484293),complement(5483830..5483876,5482610..5482824),complement(5482478..5482535

Genome Context

<gbrowseImage1> name=IndicaChromosome10:5482478..5485579 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:5482478..5485579 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGAATTGTCTTGGTCGTTGCTTTTGCAGCCGTCGTCGTCGTCCAGGCCGCCATGGCACAGAGGCCAGGGATGCCGCCGGCCGTTGTTCCTCCTTCTCTGCCGACGACGACGCCGCCCGCGCCGACCGTCGTCGCTCCTCCTCTGCCAACGACGCCGCCGCCGGCCGTCGTTGCCCCTGCTCCTCCTCTGCCGCCGCTGACGCCGCCGCCGGCCATTGTCCCCCCTGCTCTACCGCCGCCGCCGCCGCTGCCGGCCATCGTCGTTCCACCGGCTCTGCCGCCGACGCCTGCCATTGCTGTTCCTCCTGCCCTGCCGCCGATCCCGGCCATCGTTCCTCCTTCCCTGCCGCCGACGCCAGAGGCGAACCTGCCGTGCGTGGCGGAGCTGGCGCCGTGCTCCGAGTTCTACCGGAACGCGACGGCGAAGCCCACGGGCGCGTGCTGCGCGCCGCTGAAGAAGGCGTACGAGAGCGAGCTGGGATGCCTGTGCTCCGTGCTGACGAACCCGGCGATGGCCGCCACCGTCGGCGTCGACACGAAGAAGGGGTTGGATCTGTTCGGGCGCTGCGACGTCAAGGTTCCCACCGACGTGTGCAGCAGCCATGCGCCTGCTCCTGCTCCAGCCAGCAGTCCTCCCACAGCGTCTCCAAACTCAGACAGCAGTGCCGCTCCTCATGGTGCCCAGTGGATGCTCCCACAGATCTTCACTCTGTCACCCCCAACAGATGCAAAGGAGGCGGCGCAGCCTCTTCCACCATGCTGCATGAACGATGCGGCAGCATGCCGTTCTCCTATCGCCAGTCCATCCCCTATGGCTGGTGCCCCGTACCAGTGCACCATTGCCACCTACCCCTTGTCATGGTCACTCATATCTCTACGGCTCAGCTCTGTCAAGAGGCAAGAAAGGTTTGGTACTGCATGCATTTATTTTGATGTCAAAGAACATGATTTGGTACTCAATTAA</cdnaseq>

Protein Sequence

<aaseq>MARIVLVVAFAAVVVVQAAMAQRPGMPPAVVPPSLPTTTPPAPTVVAPPLPTTPPPAVVAPAPPLPPLTPPPAIVPPALPPPPPLPAIVVPPALPPTPAIAVPPALPPIPAIVPPSLPPTPEANLPCVAELAPCSEFYRNATAKPTGACCAPLKKAYESELGCLCSVLTNPAMAATVGVDTKKGLDLFGRCDVKVPTDVCSSHAPAPAPASSPPTASPNSDSSAAPHGAQWMLPQIFTLSPPTDAKEAAQPLPPCCMNDAAACRSPIASPSPMAGAPYQCTIATYPLSWSLISLRLSSVKRQERFGTACIYFDVKEHDLVLN</aaseq>

Gene Sequence

<dnaseqindica>1..622#1287..1313#1704..1750#2756..2970#3045..3102#ATGGCGCGAATTGTCTTGGTCGTTGCTTTTGCAGCCGTCGTCGTCGTCCAGGCCGCCATGGCACAGAGGCCAGGGATGCCGCCGGCCGTTGTTCCTCCTTCTCTGCCGACGACGACGCCGCCCGCGCCGACCGTCGTCGCTCCTCCTCTGCCAACGACGCCGCCGCCGGCCGTCGTTGCCCCTGCTCCTCCTCTGCCGCCGCTGACGCCGCCGCCGGCCATTGTCCCCCCTGCTCTACCGCCGCCGCCGCCGCTGCCGGCCATCGTCGTTCCACCGGCTCTGCCGCCGACGCCTGCCATTGCTGTTCCTCCTGCCCTGCCGCCGATCCCGGCCATCGTTCCTCCTTCCCTGCCGCCGACGCCAGAGGCGAACCTGCCGTGCGTGGCGGAGCTGGCGCCGTGCTCCGAGTTCTACCGGAACGCGACGGCGAAGCCCACGGGCGCGTGCTGCGCGCCGCTGAAGAAGGCGTACGAGAGCGAGCTGGGATGCCTGTGCTCCGTGCTGACGAACCCGGCGATGGCCGCCACCGTCGGCGTCGACACGAAGAAGGGGTTGGATCTGTTCGGGCGCTGCGACGTCAAGGTTCCCACCGACGTGTGCAGCAGCCATGCGCCTGCTCCTGGTACGTATATGCGTAGTAATAACATGATGTTGACAGAATGTTCGTCTTTCTTGATAAGAGTATTTGCCAACTTAGGCTGTGTTTAGACTCGGTGGCTGAAAAGTTTCGGCGTGTCACATCGGATATAATGACGCATATTTGAAGTATTAAATATAGACTAATAATAAAACAAATTACAGATTCCGCATGTAAACTGCGAGACGAATTTATTAAGCCTGATTAATCTATCATTAGCAAATATTTACTGTAACACCATATTGTCAAATCATGGAGCAATTAGGCTTAAAAGATTCGTCTCGCAATTTACACGCAAATTGTGTAATTAGTTTTTTTTCGTTTATATTTAATACTCCATGCATGTGTCCAAAATCTAAACAGGCTCTTGTAAGTGTGATATTGTATAATCAGTCAGGGTTTACAATTTCGTAAAATACCGAAGTTTCGGGTCACTGAAATTTGGGAAAGTGCTGGTACGAAATTAGTTAAAATTTAAATAAATTTTGACCAAAATTTCAAAAATGTAAAAGAATCCGAAATTTTTGGAGCAAATGGTTGTGTACCGGGGGTCCGAAACTCCCGAAAATTTGAAAATTTCAAACCCGTAATACTTAAATATGATTACCGTATTACTGATACATCTGTCTTTTCTTTTTTTGTTTTTCAGCTCCAGCCAGCAGTCCTCCCACAGCGTGTAAGTGCAACTTCGTGTTTTTCTTTTTCATGTTTCCACATACTCCCTCTGTTTTTTAATAGATGACGCTGTTGACTTTTTCTCACATGTTTGATCATTTGTCTTATTTAAAAATTTTATACAAATGTATAAGATATAAATCATACTTAAAGTACTATGAGTGATAAAACAACTCATAACAAAATAAATTATAATTACGTAAATTTTTTGAATAAGACGAATGGTCAAACATGTGAAAAAAAGTCAACGGCGTCATCTATTAAAAAACAGAGGTAGTATTAACTTCTCAAAAATTAAATTAATATTTATTTTCCGATAATTTCTTTTGTTGTTTTATACTTTTTAACTTTCCTTTCTAAATAATTTCCTTTCTCGCTTCAATGATTTCAGCTCCAAACTCAGACAGCAGTGCCGCTCCTCATGGTGCCCAGTGGATGGTATATTCGAGCTTCTTCAGCATCCTCCTTGTGGCTATGTCCATTCCTGTGTAATAAGATCATTATTTTTTCCTTCCTGGAGAGAATACGTTAATTTTCCCTTCTTATGTATGCATGTTGATTTGCATAGCTGGTCCTTTGCCTGGTTGTCCACTATTCCTGGGGAACCTTATTAATTTGTTTCCTTTGAGCACTATTATTATTTGTTATTTCGAAAATGGTTATTATTTGATACTTGTAAGTATATCTCCATTTTTTATGAATAATCGATGAGCATGGATTTAGGCGGTGTCTAAATCACAAGTGTTCGCTGGACAATGAACTAGCTATGGATCATATGGTTGGTAAATAGAATATCCAGGTGAACTTGGTGTAAACCCTGATCAAGAAGTCGTTTAAATTCATCAAACAAACGATCAAAAAGTAGATAATATGATGTTATATAACCATGTAAAAACTCTTTTCTTAACCTGACTTTGTCTCCGACACATAAAAATAACTAATCTATAACTATCATTAGGACAACTTACTAGTTAGAAATATATGTTATTTTTATATCTGACGAACGAAGTTGAGTTTGGACAATATTTTGTATAACATAAGATGGTCAATCCGCATGAGCTCAGGTAACAACGTGAGCATATGGAAGAATGAAACTCATGATCAGATTTTCAAAGTCAGGTCCCAACAACGATACTAAATCATGGATGTAGAGAAAGAACCGTCCAGCTTGGAGTCGTCTGCTCAAGTTTGATAGTTGGAGAAGAATATGTGTAATTAATGAGCACACATAGTAGGGATGGCGATATCCCCATAGGGGGCAGGGTTACTTTTTGTCCCATGGGTGTGGTGGTTGGAGGCCCAACTAGTAGCAAGGGCTGAACTGAAAGTGACCCACGAGACCCCACGGGTATGATCTCTATAGAGGTAGCCATTCCAAGCCTACCAGTCCAAGTCACTGGAGGCCACCATATATAAACCAACCCTAACTCCGTAAATCCACAGCTCCCACAGATCTTCACTCTGTCACCCCCAACAGATGCAAAGGAGGCGGCGCAGCCTCTTCCACCATGCTGCATGAACGATGCGGCAGCATGCCGTTCTCCTATCGCCAGTCCATCCCCTATGGCTGGTGCCCCGTACCAGTGCACCATTGCCACCTACCCCTTGTCATGGTCACTCATATCTCTACGGCTCAGCTCTGTCAAGAGGCAAGAAAGGTATTCTTCAAGAGTACTTAACTGCTCAATCCTCAATCACTCCTTCCCTGATTTCCTCAACTTCTTGCATTCAGGTTTGGTACTGCATGCATTTATTTTGATGTCAAAGAACATGATTTGGTACTCAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032198