Os06g0304500

From RiceWiki
Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0304500| Description = CRS1/YhbY domain containing protein| Version = NM_001064000.1 GI:115467731 GeneID:4340839| Length = 3617 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0304500

Description

CRS1/YhbY domain containing protein

Version

NM_001064000.1 GI:115467731 GeneID:4340839

Length

3617 bp

Definition

Oryza sativa Japonica Group Os06g0304500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11551109..11554725

Sequence Coding Region

11551132..11551208,11551294..11551672,11551778..11552179,11552392..11552580

Expression

GEO Profiles:Os06g0304500

Genome Context

<gbrowseImage1> name=NC_008399:11551109..11554725 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11551109..11554725 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgctcgcgccctgtctcctccgccgccgacccctccgctccgccgccgccgcggctctagtccatccaagcggatcctggatgcggccgcgcggtgcgggttcttccccgcgtcctccgggcgcgtcgccgttgttcgagcctccccgcgtggtgtccgagcgttggatggacgggcgaggatggtggttccggttccgccagcccgtgcggcacgggagcacggcggtcacgctggacacgggcggtggattcgccaggttctccgtcggcggcgacgcgggcacgaagcagggggccggccggaaggggcagcctccggcgaaggcggcgaagaagaagatgtcgaggaaggccaaggttaaccagctgaagtggtaccgcctcaaggccaagaagaagatgaaatcgcccaatcctgaagtcaggattagatacaaactcgagaaggcgaagaggaaagaagaatggctgattgagaagctgaggaagtatgaggtcccgagatctccggagccggttcatgaccctgagattctaaccgaggaggagaaattttacctcaaacgaactggcgagaagaaaaagaactatgttcctgttggaaggagaggggtgtttggcggcgtggttcttaacatgcaccttcattggaagaaacatgagactgtgaaggtgatctgcaaaccttgtcggcctggccaggtctatgagtacgccgaggagctgacccggctgagcaaaggcacggtcattgatatcaaacccaacaataccattatcttttatcgtggaaagaactatgtgcagccaaaggttatgtcacctccagacactctctcaaagcagaaggccctcgagaaatataggtatgaacaatcccttgaacataccagtcaatttattgagaagctagagaaggagcttgaagattaccagaagcatgttgctttattcaagaaccgtggggaaactttagaaacaatcagcagcgaagaaactaatgttgatgaccttacaagtagctcagatactgaatga</cdnaseq>

Protein Sequence

<aaseq>MASLAPCLLRRRPLRSAAAAALVHPSGSWMRPRGAGSSPRPPGA SPLFEPPRVVSERWMDGRGWWFRFRQPVRHGSTAVTLDTGGGFARFSVGGDAGTKQGA GRKGQPPAKAAKKKMSRKAKVNQLKWYRLKAKKKMKSPNPEVRIRYKLEKAKRKEEWL IEKLRKYEVPRSPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHL HWKKHETVKVICKPCRPGQVYEYAEELTRLSKGTVIDIKPNNTIIFYRGKNYVQPKVM SPPDTLSKQKALEKYRYEQSLEHTSQFIEKLEKELEDYQKHVALFKNRGETLETISSE ETNVDDLTSSSDTE</aaseq>

Gene Sequence

<dnaseqindica>24..100#186..564#670..1071#1284..1472#gctggccggagcgcctcttcgccatggcgtcgctcgcgccctgtctcctccgccgccgacccctccgctccgccgccgccgcggctctagtccatccaaggttagccctcccccgtcgcctctctctctcacacaccgcgcggcgttcgatctcactctctcgggttggtctctcttgaattcagcggatcctggatgcggccgcgcggtgcgggttcttccccgcgtcctccgggcgcgtcgccgttgttcgagcctccccgcgtggtgtccgagcgttggatggacgggcgaggatggtggttccggttccgccagcccgtgcggcacgggagcacggcggtcacgctggacacgggcggtggattcgccaggttctccgtcggcggcgacgcgggcacgaagcagggggccggccggaaggggcagcctccggcgaaggcggcgaagaagaagatgtcgaggaaggccaaggttaaccagctgaagtggtaccgcctcaaggccaagaagaagatgaaatcgcccaatcctgaagtcaggattagatacaaactcgagaaggtctataatatttcagtgttactgatttgtcttgttcctatttgctgtttgaatgtatctgattgaggagaaatgctgcattgttaaattgacatgtgaattcaggcgaagaggaaagaagaatggctgattgagaagctgaggaagtatgaggtcccgagatctccggagccggttcatgaccctgagattctaaccgaggaggagaaattttacctcaaacgaactggcgagaagaaaaagaactatgttcctgttggaaggagaggggtgtttggcggcgtggttcttaacatgcaccttcattggaagaaacatgagactgtgaaggtgatctgcaaaccttgtcggcctggccaggtctatgagtacgccgaggagctgacccggctgagcaaaggcacggtcattgatatcaaacccaacaataccattatcttttatcgtggaaagaactatgtgcagccaaaggttatgtcacctccagacactctctcaaagcagaaggtaatcatgtttgctaaaactaatttgtcgggaacagagcttgttgtcatgccacctctctttctttaaacttaatacaaacatgtcttgtaattatagctgattacctgtttgttctcatgctacattgctactcagtaatatttagatttttatgaaagaagttcaaatgtccagtcaacttatgtttatctgtattctgtactccataggccctcgagaaatataggtatgaacaatcccttgaacataccagtcaatttattgagaagctagagaaggagcttgaagattaccagaagcatgttgctttattcaagaaccgtggggaaactttagaaacaatcagcagcgaagaaactaatgttgatgaccttacaagtagctcagatactgaatgagctatctctttcaaccatgatgccatagatcatttcgtattgaaggtttgatcagagcatactcattgttcattacaaatgctactcagttttggtgcaataatgatcatcagctttcttcaatagttcaggtagaaaataaaataagtatcatattcattagtttgaatactttaaatgaaaagaagtcgcattcattaggccatgtatatcttgctgtcatattgaaaatcctttaattgaacaatgcttgtatcagcaatttatcttcgtaaggttggtgctgagtacaaatcaggcttttactagacccaagcaggatttcttgctggaattgttagtatgttttatttcatgatattgtttccagttcctgtgtaaaattatttatgaaaatagtttttcttttggtccatttgtgttttcttattgccctttgtgtatagatttgtcaagcttgcattatgagaagaaatggtgcagcatacagagatccatgtaccactatttattgtgatcgcagcatctggatatattaaagatctgtccacattacaacagtacacgtttacatcaatttcggatgctggtagcaacatgagctgtatttgtgtgacagatggcttccttggagcttgaatcttgaaacatcaaaacttggggctgactacttgaaagaggtctacagaaaacttgggccatctactcaattgaaaactggtaaactctcacccagatctccatgagttgaataatttagtaacatgtagaagaatgttgtttttagattggcaaattatgtttgttcacagttattaatttatgagattaaggcaatatgatgtcaatgcctcaatggacaatttccatggtagataacttataatactccatatattgttttagtctctacagacattttatgccagattagaggaaattcctcttgatagtcctattttgcctgggaagatacataaaaatctgccaaagctatcactgtggtcattaaaaccaacttatttgagtcagtatctatatttcagtactggggtactgtactggtatatacttgctaaccagttactggcagaaaacaatactattgcatgaatataagaacgtaaaccctaaatttgtttttttttactaaaattaatatctagcaactctccaagaattgaattaaatctgtgctgtggaaaatggtagtcactacaatcgatgcattgatactattataattagtgaatttcaactttagtaggttattcttgtttagttggatctttgacagcaaaggaaaagcagtgcaagttttttagttcttttctttgtgataatcaactaaatcatatatccttagtttaccactactatttagtatatatcaacaacatcagaaattgaaatattaaccaggctacagttttttcaccatttaaggtttggttttctgcagtcaccactgaaatgtaatgttttgcacagaagtgatcatataataagaaacggaataattgagttatggaataagtagatcttgtgaactacagttgctaggtggttgtttcatctaattctttccctttgatagctaatctgtcaatgttgaagaaacatttttgacattttgtacgattgtatatgcaggccatggccggctcctagacaaatctatctgcagtgttgtttgctgttaagctccagtgacataacgcctgcaactgcaagcagatcccatgtggtgcctttcagcttcactggggatgcattcctagcgtcttcttttttctctgttaggtatttaagccccaaccattgacatgatctggttgtatccgcctcaacagggccctgattgatgaagctgatgccataccaatcgactccaaatgattcctaaatgtcactcgttggttccagtccttgtcatggtgcataaagcaaggtaatcagacgaatcagtcatcacatagaaccgaatattgtgcagagtttagcagcatctgcttggcatgattactggcatcctatgagctagtgtaactgtagacctgatcatctgtggagttgttcaccacttagcgttgtgtaacatggactctgaaaatcatgtgtcaccaaattgtgctacttacaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0304500, RefSeq:Os06g0304500