Os09g0504400

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0504400| Description = Cyclin, N-terminal domain containing protein| Version = NM_001189000.1 GI:297727130 GeneID:9272663| Length = 4171 bp...")
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Gene Name

Os09g0504400

Description

Cyclin, N-terminal domain containing protein

Version

NM_001189000.1 GI:297727130 GeneID:9272663

Length

4171 bp

Definition

Oryza sativa Japonica Group Os09g0504400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20152675..20156845

Sequence Coding Region

20152787..20152818,20152949..20153055,20153795..20153834,20154469..20154513,20155226..20155347
,20155440..20155554,20155682..20155726,20156122..20156269,20156374..20156493

Expression

GEO Profiles:Os09g0504400

Genome Context

<gbrowseImage1> name=NC_008402:20152675..20156845 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20152675..20156845 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccaacttctggacgtcgtcgcactgcaagcagctgctggaccaggaggacgtggacaaggtcccccaggcggacagcgaccggggcatcacgctggaggagttccgcctcgtcaagatccacatgtccttccatatctggcgattggcacaacaggtgaaagttagacaaagggtgatagctactgctgttacttatttcaggcgtgtatacacaagaaagagcatgactgaatatgatcctcgtctggtagcaccaacctgtttgtatttggcatcaaaggtggaagagagcacagtgcaagcaagacttcttgtcttttacataaaaaagatgtgtgcttctgatgagaagtaccggtttgaaatcaaggatatccttgaaatggaaatgaagctcctggaggcacttgactattatttagttgtttaccacccatatcgtcctcttttacagttattgcaggatgctggcataacagatctgacacaatttgcctggggaattgtcaatgatacttacaagatggatcttattctcatacacccaccatatatgatagcattagcctgcatctacattgcaagcgttcttaaagacaaggacataactctgtggtttgaagagctccgtgttgacatgaacattgtcaagaatatctcgatggaaattttggacttctatgacacctacaagattgatcctcaaagagggctcccagaggacaaaatagcccctgtgatgaacaaactgccttcaaaggcctaa</cdnaseq>

Protein Sequence

<aaseq>MAANFWTSSHCKQLLDQEDVDKVPQADSDRGITLEEFRLVKIHM SFHIWRLAQQVKVRQRVIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTV QARLLVFYIKKMCASDEKYRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQLLQDAG ITDLTQFAWGIVNDTYKMDLILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNI VKNISMEILDFYDTYKIDPQRGLPEDKIAPVMNKLPSKA</aaseq>

Gene Sequence

<dnaseqindica>113..144#275..381#1121..1160#1795..1839#2552..2673#2766..2880#3008..3052#3448..3595#3700..3819#ggtgggtcccctccccttcccccctcccctccggcgaactccgagctcttcccggtgagcgccgccgattcggccggagaggctcgccggagtcgcctccgccctgcccacgatggccgccaacttctggacgtcgtcgcactggtaagcgtccaacctcccccacgtttccccccctctcgattcggtttcttgggctgcgaatccgtgagctgagctgctgctgatttggggggtgttcgttcgtgtgtgatcccgcggcgagcgagggcagcaagcagctgctggaccaggaggacgtggacaaggtcccccaggcggacagcgaccggggcatcacgctggaggagttccgcctcgtcaagatccacatgtccttccgtgagcttctcctccctttagctttcctgtgatgctttcgttgacgcgaatttgttctcagctccgggctcggtgtgattgcctggtttctggaattggggagatactgctacttagcataaacggatttgagaatgattttaggaactagtatgcgagcgttagtgggctcgttctagatgaattcggtagtcagtatatacaactttgtgtcacatgcatactagtacgttttaattgggttgtgttgatcaaaggaattggctatagttacaaggcaattagaaatttgtgtagtatgcttgtagtgtataattgttgtatgcaaagcattttcagctcacggcatgtgttgtttggtcattcggtggttaagaaagggaacttttagccattaatatgcacagatttttgctgtaattgcaatgaatcaagttgtcataggatgtgtagtcatgcccttgcgcaatgttatgcatcttcgtatggaaaattctcgaacatacagatttgtattcttattcggttatagtggggtcactgcaagctatgctagcattgtttccataaatcgacaaaggtgtagcataactaccgtaggtatgaaaatggataggagcgcatagtatttcgttccatttatagaagctgtagcgtctcacttaagattgctcgatgttcatgttttgtacttttgtgttagtcctacaaattaaggcaaatcatttgatgatttcagatatctggcgattggcacaacaggtgaaagttagacaaaggttaaaccttctctccactttctggcctgtaccatttgttataggatgcccttatcgaacaaccaaagttgtcattttgcattgggacttagttagcaggctttccttgtacactctatgcgctgtagactatttctaaaaatgttaccaagggtgacttttttagggtaattattttaagaaggggattctgcttcctttctacttgcaacaaatttggcagttacttttctgaaggattactttcaagcctgtggaaatatatgttatagtgtataaattgctggctcattactttagagacataaatactttggttttgttttaatgtttccctcgtcaagattcatttttgctgtaacatttctgctgtctgcttggccttaaagactgagatataatttctttaagagaaaaacgaacatgttagttatacttttatatttttccctttactgtagtatctgtcaaccataagggcatttcaacgttctcacaaggttaactgtaactcataatgtttactctatatctactaattttgtccattttccaccagacttatccattattaccttgagataccgacctcaagtttttgaagatactgatcttatgtcatttgtattttcagggtgatagctactgctgttacttatttcaggcgtgtatacacaaggtatgattctctttaaggatacatgggaaaggcagttgccttctattcatcgaggagaaagagtgcctaagatatccatatgaatttgactgtcaatttaactagctagagaagggaaaatgataaccttattaggaaattagaaagcgtatttttaagattatagggttgccaccttaatgggaaagtaaagccatctctcatgtaagtaaaatagaacttctcaatttggtgcacaataaatatattccctgatatacaagagagaggtggagaggagagtgacttgattatgggttccaaatgttaattaggagatgagtaacacactagagctaacaatgctaagctgcgagactgctttatagcttgtttggtgcgaattcacactgtagatggccttactttcccattaaggtgactaccttataatctataaacaatatactttctaacttcctaataaggctatcattttcctttctctagctaattaatgccctaagaattatggtatgtggggggcttgcaaaatgttgatgtgattctctactatgttgatgtgattctctactttcttcgataagaactagagtacacagtggcacagtgcacagtgctttctaatatttcattccagaacatttaattctttgttgcagtggaacatcaagctattagaattttgttctgatgctggatatgtttacagaaagagcatgactgaatatgatcctcgtctggtagcaccaacctgtttgtatttggcatcaaaggtggaagagagcacagtgcaagcaagacttcttgtcttttacataaaaaagatgtgtggtaaggctcataatcataaatggacacatatttatcgggaagaactgcactaacctaaaactaaacatgtgctctccccccgcaaaatgtagcttctgatgagaagtaccggtttgaaatcaaggatatccttgaaatggaaatgaagctcctggaggcacttgactattatttagttgtttaccacccatatcgtcctcttttacagtaagattctttttccactatcatgcgatgaaacaacattatctttcaccggaattaccgaagcccttatatatactttaaatgaacatcagagctgcaatggtattaacagatgctttgattttaggttattgcaggatgctggcataacagatctgacacaatttgcctggtactcttcttataacaatttgcatttttgtatctgtgaagtctgttttgagttttgttttatgcagaaaagctgttttagatgctttctggcatttggtggtccaagtctaaccctttttaattaccacatggataatttgttgacatttatttttagatttgaagagagtatttccatttattattgtcatattgaatatcctttgaaggactcttaccacttttaatcatttcagtgtgatagagtacaataagatctagtagcttttatctggaatcacatgagaaataaacaaatgaattgaattgtctttattatgattagtgaacataatgcacgcaaaattttcaactataccttttcctatgcttatcatctgctgttacttgcaggggaattgtcaatgatacttacaagatggatcttattctcatacacccaccatatatgatagcattagcctgcatctacattgcaagcgttcttaaagacaaggacataactctgtggtttgaagagctccgtgttgacatgaacattgtaagtgtgcctgttgatcacttgatcttgccctggctcccatcgtttgattctcttgctattttcatccattaatgattgattgtattttcatcaattctcaggtcaagaatatctcgatggaaattttggacttctatgacacctacaagattgatcctcaaagagggctcccagaggacaaaatagcccctgtgatgaacaaactgccttcaaaggcctaaagcagactgagccctagttcagttgttatcagtctgagcgtcaaatcaccttatgctcgtacaacaggaaatatgtgtcaccttccttggagaactttatatttcaaagccatatatatatatagtatcagaattcagaattgcccctaacgaacgatttaattcagaattccgaactatatacagctgttcctgttgcagcagcttgcgaggcaaatcatttacaatgaagatcccaacgggttgggaatggtctgtatctgtatgtgtttttgatgtgtaaaaaaaaacatggctttggtactatttagtttctatagcaaatgaaatcctgaaaaattcttgcggtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0504400, RefSeq:Os09g0504400