Os06g0313500

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Revision as of 09:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0313500| Description = Conserved hypothetical protein| Version = NM_001064023.1 GI:115467777 GeneID:4340867| Length = 8232 bp| Definition ...")
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Gene Name

Os06g0313500

Description

Conserved hypothetical protein

Version

NM_001064023.1 GI:115467777 GeneID:4340867

Length

8232 bp

Definition

Oryza sativa Japonica Group Os06g0313500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12082938..12091169

Sequence Coding Region

12082938..12083044,12083565..12083604,12085287..12085467,12086266..12086359,12088911..12089106
,12091152..12091169

Expression

GEO Profiles:Os06g0313500

Genome Context

<gbrowseImage1> name=NC_008399:12082938..12091169 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12082938..12091169 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacttgatcaaatgcaaacaacagttccaaatctgaaaacgtgttctacatattgtaagagtggcattcatgcattggtcatggtcatgggaggcaccggggatctctacagtttgcaatcaacgttgcatctgcaagcacagcaatttaatttggctattgaagctacattagtgagtcccttcgatcaaccagcagaaagccagaaaaatgacttcaaatatggcactatctcttatcaacatatattttgggccgtcagagtttttcctaactatttcctcgtgctggaagaaagcatcagattcgaatcggagaatggaggttgcaggttactacgaaccagttcgacgaggaggcgcgtgcagcctattcggcggaatgctcaagaggaacgccatgctcaggccaccgcgccatggcgagggggagatgtcccagcatggaagggggaggtggaggcgacggcaatggcgatggctaaaggtgtcctcgctgcaagggagcttgtcgagacaaccaaagttgtggtagatggaatgaaagttgagcttcctgaaggccgcaaaggtgcagctgctgtctcggggtatggaggcggctggccagggacatacggacactatccatga</cdnaseq>

Protein Sequence

<aaseq>MPLDQMQTTVPNLKTCSTYCKSGIHALVMVMGGTGDLYSLQSTL HLQAQQFNLAIEATLVSPFDQPAESQKNDFKYGTISYQHIFWAVRVFPNYFLVLEESI RFESENGGCRLLRTSSTRRRVQPIRRNAQEERHAQATAPWRGGDVPAWKGEVEATAMA MAKGVLAARELVETTKVVVDGMKVELPEGRKGAAAVSGYGGGWPGTYGHYP</aaseq>

Gene Sequence

<dnaseqindica>8126..8232#7566..7605#5703..5883#4811..4904#2064..2259#1..18#atgccacttgatcaaatggtatttcttcttcttcccctttccctaccaatagaatctccccctcacagcatctaacttgttatgaaactcctcagggagcttaaagaaacccatagcatacaaaggaatactagttagacaagaatttattctaatctccctccccccataagacaggtggccactgtgccatgaatctagtcttttctcaaccttctggcattagtggtctaaattcctttctctgtagcttcccaaaactcataggaaggcctagataactaaaaggcatcacccccactttgcagttcagcatatcagcaaacttttcttcagtctccttagacacccccatcacataaacttcacttttttatggatggtgcaaaacttaccacctacttttaggctgcgttcgaacctgaaggttcccaacttctctaactcgtttttcgcgtgcacacttttcaaactgctaaatggtgcgttttttacaaaaagtttctataagaaagttgcttaaaaaatcaaattaatccattttttaagaaaaatttagctaatacttaagtaatcacgtgctaatagactactccgttttccgtgtggagaggatgggttcccaacctatcgtatcgaatgcagccttaataacacctcctgttgcaattgcaaccaccggtctcatcaccaagaaggtggcacacagtacatgtattcttaaccgctcccatgttacacatgccttaatcagctgacaaaagattaaaagctgtcatgttagttagccatttagctaaaaatatgcatattcctgaaaaaaaaaagctacaaatatacatagcatatatagctgtaacaaatcccaaccctactgttctaccttctattcttgttggagaaaaagatgatttttttttgaccaatccattggtggtcgacacattgagctctgcctccggcaggcatctatgacggtcaattccattttgaccattgcctggtgtgagtcctttaaccatggaaggcatattggtttgatcgaggttctgtaatgaaataatgaaataaagtgttttttacttggcatttctgagttctgatctcaaataaaagtttacagtagccctgtatccatttgaatgcttggaattgaatttgccacaatccttataaactttaattagcattgcacatccaacgattaaatttgattcttggtcatattgtcatcatccaaaatgtatgaggagtttgtgttattttgcaagttagcatccagttttgctatttttgagatagcaactgctccttctgtccacaaatataatcgttattataccatttgtaatttatccacacatataatagattttagagtactactcatatcactcaaccatccttatttaatttttgatacaaggacacattgttgatggatgttttttatttgaactatagagatagacatagcaaaactcattgaattaaagtagcaattctgaaatgcaacatcaatgcagcaaaaaatcagggcatttcaggaaaaaaataacctagtcaagcattaagtacttgcatttatatgactgtagaaaatctcccatcgtgcttattgccatggacaagaaagctttcatatcactgcaagaagaaagaaaaaatatcgccataagtagctgctcttctctctatgtgttcagatcagatgactagaaatacacccaacacataccgtgcatgtgttacctagctgaaaccatatcaaataatgcaagttgccatctctaggcatgaaaggagtcaggcatgtcgccataggactctattggagcaaaggtcaggtgttatcaattatctggacaacatgccgccatagcaggataggatatgggttgttcgatgctgctttggatgagtacaagttagcacgatctcccagtcagtgtaggattcgcaatttcagactcaattttgaaccaaatgataggtttttgtaggattagccagacagtttgccgagtctctcaatttggattttttttttggttgatgttcagcaaacaacagttccaaatctgaaaacgtgttctacatattgtaagagtggcattcatgcattggtcatggtcatgggaggcaccggggatctctacagtttgcaatcaacgttgcatctgcaagcacagcaatttaatttggctattgaagctacattagtgagtcccttcgatcaaccagcagaaagccagaaaagtacacagcaatttatatttccctgaacatgaagtaaacgtgcaacacacaaccagcaaattctttttcctttggcaacgcacaggcgactactggcagtactctggagtctggacaattacaactctgcgatcttaatttgttaatttcaatgaatgatgcagcaaggtataaaattctgttcaattatatgattagattattattattatcaatctaactgcgtctggggtcatccgtctaaactggatatggcgaacatcctcccaaaacagtttatgataagcatggtaatttcatcggattcaaaattttcttgatttggcactgtgaacaaacagtttatgctctgtttaggagcaaaataatctttaggagcaaaataatgtcttgtttatgagagagaattgctacatgatgtttcccaaaatcaagtgatggaaatatgccttttgatatcttagttcagccatcctaacaaaattaagctttgcaatcgttcgcagcactacttttttcacacacaactaacacatacagctttctcatgacaccttaggatcaacacacttgcgttaaacaaatacacctgatgaaatatttatcggaatattgctaaccttcgtgcagattttgggtcacttgatgtacttctccattagtgctccaagacttctcctctaactccggctacctcctctttccctctgacgccgacacccttatgtaggaccgaatagtaaaaactaagccaaccaaaaaggggtgaatggttgtagtagccaaaaaccgaaacatttagcggaattaaggccccgtttggtatagctccagctcccaactccaacttatctagagctggagctgaaatggtacagattctcatttttggagcggggttggcaaagctgctccacaaatttgtactacgagggtggagctggtttttctgctccacagctctactccatcccaaaaaacctactaccctttaatttttttaatgtatttacacaaaaatgccactgaactacccctaaacaactccttccattctctttcctcatattctcccatcatcgccggtgagactggcccgattcggcggtgaccggcagcgtgcgggctggcggcagggcgcgggctgctggcggcgcatggactggccgatggcggcgagcggcggcggtggcgacacgctggctgaccggcggggcgacgccaaccaagtgttcgacgaaatgactacaagggacgtagtggtgtggagctaacaagtttagccaagcactttcacacccacctcaactcctataggagctagctcctactagagttggagttcacagttagaagtcggagtttggaactctaccaaacgggacctaaaagttaccctcaactcgatgtagactggcctacccggagtagatgcgccgcggtctgaccgttcgatgtactccggcctgaccggtgtagtacctccggtctaagcagccaacacgctgcatatatttacttgccggtaggggacgaaattgacaaccctgctgggaagggacacaataacaagacctatcgccactgaatctgtagagaacacacaaacatgccacccatctatggcagagttacaaacatctccagggaaaacatggtacccaaaccgaagtcacccaaaggtctcatggatttcacacaaaggtcccatcagtggagaaaaaagtaggcccggtaaaaacgccctcaagtgggatcgtctctcatttccatggacacaaatgtattcacactggcggagaaaccgtctttactctcagtttgtaacaccctgtagtcccggttttccaatcaggactacgaatccgggattatagatcgctataatttacttgtatagtatcacacactaataattatataatataaatagaatataacataaaattaaacataagtataatataaatagaatataacataaaattaaacataagttttaagtaaaaataaattgaacataagttcacatatctatctattatatactaaaagtccattaacctttctacaaacgctcccaagctgtcacgtggcatcctacaaactcttataagccgccacatggcgttctaataaattaggaaaaaaaaaggtggacccactaattaattttgccaattaaatctccattaaaataaaaaaaatctggtatcccaccaccgtacgcacacacgtacacgtactccctccacaccctccgaactcccccctattctcctattctcccccctattccccttaccaactcacctatccggtacacggtggttactcattaagtgttacttcctccgtttcaggttataagactttctagcattgcccacattcgtatagatgttaatgaatctaggcacacatatatgtctagattcagtaacatatatatgaatgtggacaatactagaaagtcttataatctgaaacgaaggtagtattattttgtctatgcctacacgaatcatttaacatatatttaatactctagatgacttcaaatatggcactatctcttatcaacatatattttgggccgtcagagtttttcctaactatttcctcgtgctggaagaaagcatcaggtaatttaaatatggatttatctctgaacaacatgacttccatttgactgcttggatgatatcacaatcatattaaccacttaatcttgatcccttttctacttgaacccacgcagcacttagttcactgcgcagaggttcttggaacaccaatttgttggggattacaagtatggacggcaagcgcatcggaactggatgcctcttcccctgccacgaacaatcgatgaggaaaccgctcaggaaagggaagcttccctttgtgcttgttgtgggtggtagaagcatcggtgaggagcaacctcagctttatctacactgcaatcaaatggttcttcctgatatcccagtggctgttcccaggctgtagtctgcaggtgctaatcccgattcctcagatcttgagaatctcaactctgttgctcccctgcaattgcatatgcggttgagttgggaaattccgaagtatgtgaagatgtggagataataagaaaattgtcacaaaaaacacggcgggggggggggttaatttgatctgtatcgttgcaaatatgtctatttagataaatgccattacaattcgtctattcgtagccgtggtactgaaattttacaaagttagaactatgtcatcgccgtcacgtttttcattttcttccccatatgcacgtgggacccagtgttagattcatcttcttctttttgctctctcttatcatcttccttcactctcccttatcgccttcatatgcaagttgttcttcaaatatttgtttgcgatttcttttgtcttggcagattcgaatcggagaatggaggttgcaggttactacgaaccagttcgacgaggaggcgcgtgcagcctattcggcggaatgctcaagaggaacgccatgctcaggccaccgcgccatggcgagggggagatgtcccagcatggaagggggaggtggaggcgacggcaatggcgatggctaaagtaacgcagttttgctattttccacaatatccgcctcttcttttcaaggttataggcggcacttttctttgtgattgttgctagcacctctcctagctaggaaggaaagagttgaagaggtcatactttactactgttcatgttatttgttttagcgttatcaaagttctttggtacaatgatcagattcatagttccacgttccaactatatataagtacctagctcagtatgatgtttcatggtggagtagtagtttgtagtaaactatgaaatagtacctctgtctcagaatataagaagttttagagtcgacacaattattaataagaaagtcggtacaactaaatgggaagaggttacgattggtgaagtgaatgatggaggattatatatggttggttgagaagggaatgttagtggataagttgttatattttgggtcaaatcctgagagctaaagttgttaatagagagtattaactaaatatttgtatttgctacttgtagtggcctgacaaaaacatgttgtgccaatatttgtcgtcaaaattcaaaattcattgtattgagcaagcaggcattatgctcagtatccctagctaagtcaacttaaatatatattagaatgcaaattatagaatcactaactggcggctattgagtctgaatacaactcaagtctcaatttcatcttaaattaaataagagtttctcaagtcaaaatggatacacaccagtatcctgtggctcagttaaatctatagtatccatatgcgacatccttgagaattttctaggtaatgaaggtgtagtaagtgttggactaccggaagaaacttggagaaagacatactagctcccaggtttcaaattatgtgtcgttttagtttttttctaagttaaacagtcctaactttgactaccaatttctacacatttgtatatagtttaacaacatgttatgaatgtatttcttgtagtcaatctaaaaacataaaaattttattgatatattacacaaatttatagaaaatgattgtcaaagttaaaagaatgtttgacttgaaataaaactagaacgacaaaactaaaacaagtaatttgaaagggaagaaatatagtattatctctcaaaagatctaataaataaaaaaaggtagaatcatgatttattcgtttgtaaaggtttaatttcaaatcaatgactagcttgtacatagaagaaaagtagtgtacttctacaaagacttgacaaaaacaaaaaagcagtctcacatggcacaataattagtttagtacacttgacgacccatattgccagtcattgcaaccattgaccaattcccacaatgtaggacaataaatttggttggagttaggaaaacatctggcatcagcattgacattttgtttcaagttcaaagtcatcactttgaattaagaaccggtcagcaaaaaacagtccagaccagtcgctatcctctgttagctagcagccttttggcaccaataattcaacttttactcagacctgctatctcactatatataagatagtctcatgggtttcatggtgtgccaaattgtacatgcttatttcaaaaactcagctcaaaatggcttctaggtctcctgtgctgctgtttgcgttgatggtttgtcttgtcatcgtctcgcagggtgtcctcgctgcaagggagcttgtcgagacaaccaaaggtaacatatatctctgtttatacttttgaaaaagactgaaatcttggtatgtcggtggtcaccacaatttcataaatatttaaaatttaacaacttttgcctgaatttaaataaatttgaacaaaatcataaaaaaatagaaaaatccggaaatttcatacgagatagttgcttccgcggggattcaggaatttcaatctgaaatttcaacccctgcatgtatccgttcgtatcaaatgctaggattttctcgattcctatggccagtcttctcattctgaaagtctgtacatatattggaatttcctcatacttggtgtgtgtcactcgaaccttttgttgacataatgtttgtcattttgatttctggtcatcagagggttaatgtactgttcttaaaaacatcacaaggttcatatatatagtgtgttctgcatgtgccaccaatttgaatggcatggcaggatcgaatatcaacacatgtcattatctaactagagtttgcctgctgattttgcagttgtggtagatggaatgaaagttgagcttcctgaaggccgcaaaggtgcagctgctgtctcggggtatggaggcggctggccagggacatacggacactatccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0313500, RefSeq:Os06g0313500