Os06g0316100

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Revision as of 09:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0316100| Description = Conserved hypothetical protein| Version = NM_001064031.1 GI:115467793 GeneID:4340875| Length = 3124 bp| Definition ...")
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Gene Name

Os06g0316100

Description

Conserved hypothetical protein

Version

NM_001064031.1 GI:115467793 GeneID:4340875

Length

3124 bp

Definition

Oryza sativa Japonica Group Os06g0316100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12265529..12268652

Sequence Coding Region

12265680..12266477,12267971..12268038,12268135..12268183

Expression

GEO Profiles:Os06g0316100

Genome Context

<gbrowseImage1> name=NC_008399:12265529..12268652 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12265529..12268652 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtgctgcagcgcggtgctgagcgcggcggcggcggcggccgcggcaagccgcacgccgccgtggctgcaccgcctccacgccaaagggggcctgtctttcccctccaacctccacatcgacgacctcctctacggccagcaccacgccctaccccatcctccgccgccgccgccgccgccgcagcctgcgaaggagccaccgccgcctaccaagccgaagcatccgaagcccaagcagcagcagcatccaccgccgccgccgccgcagaagccaccgcaaggtagcaccaatctctccctaccaaaccctagcggaagcggaagcggcaacggcaacccaccaccatcgccacagctgcagctctccaccgtcatcgccgacgtcttcgtcaccccctcctccgctcctccgctcatcgcgccgatcaaggccttccgcaagcagaaccacccgcgccctaggcccgacaaggcctcccgccccagcaaggagaacaaggacaaggcctccaaggtcaaggtcaagaagcgccgccgctccgaccgcgccgccgatggcgacggcgagaggtgtagcaggaccgaggtcaccgtcatcgacaccagcaccgatgggtggaaggcggcgaagctgctcctccggagaggcgccgtctggaaggtgagggacaaggcctccggggtctctgaacctgaggatcccaccaagatgaagaggagggccggcttggtctccaagattcagagggacagggagaagcagaagcagaaggagaaagaagcaacctcatcgggaaacattcatgctagtagtggagatgggatgaaagagcctgatggtcctattcaagcactgaaaagatctagaggtcctgagccagaaccagaaattatagcgcttcttcattga</cdnaseq>

Protein Sequence

<aaseq>MPCCSAVLSAAAAAAAASRTPPWLHRLHAKGGLSFPSNLHIDDL LYGQHHALPHPPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKPPQGSTNLSL PNPSGSGSGNGNPPPSPQLQLSTVIADVFVTPSSAPPLIAPIKAFRKQNHPRPRPDKA SRPSKENKDKASKVKVKKRRRSDRAADGDGERCSRTEVTVIDTSTDGWKAAKLLLRRG AVWKVRDKASGVSEPEDPTKMKRRAGLVSKIQRDREKQKQKEKEATSSGNIHASSGDG MKEPDGPIQALKRSRGPEPEPEIIALLH</aaseq>

Gene Sequence

<dnaseqindica>152..949#2443..2510#2607..2655#acatcgtcggcggcgttcgccgcaatccctcctgcgccgccgcggcgacctcctccctcccctcgccgtcgtctccaacgcgggcgcccgaatcgagattggggttttgatgacggggaattgatctcgatcgttgtcggagccgggggagatgccgtgctgcagcgcggtgctgagcgcggcggcggcggcggccgcggcaagccgcacgccgccgtggctgcaccgcctccacgccaaagggggcctgtctttcccctccaacctccacatcgacgacctcctctacggccagcaccacgccctaccccatcctccgccgccgccgccgccgccgcagcctgcgaaggagccaccgccgcctaccaagccgaagcatccgaagcccaagcagcagcagcatccaccgccgccgccgccgcagaagccaccgcaaggtagcaccaatctctccctaccaaaccctagcggaagcggaagcggcaacggcaacccaccaccatcgccacagctgcagctctccaccgtcatcgccgacgtcttcgtcaccccctcctccgctcctccgctcatcgcgccgatcaaggccttccgcaagcagaaccacccgcgccctaggcccgacaaggcctcccgccccagcaaggagaacaaggacaaggcctccaaggtcaaggtcaagaagcgccgccgctccgaccgcgccgccgatggcgacggcgagaggtgtagcaggaccgaggtcaccgtcatcgacaccagcaccgatgggtggaaggcggcgaagctgctcctccggagaggcgccgtctggaaggtgagggacaaggcctccggggtctctgaacctgaggatcccaccaagatgaagaggagggccggcttggtctccaagattcagagggacagggagaagcagaagcagaaggagaaagaagcaacctcatcggtgcgtgctctttgtgccctggcctgcagttttatgtctctactgcttaatatgcatgttcttggatcacaaaatctcacatctagctatttgattctttgcttgtggaatgcttgttctttaaccggaatgtagcatatcatgtatcccgtgataacagctaataggtgcatagatcacatttgttttgtttaagttcgcaaattttattttgttcttgcatgtattcaggagtagctttttattgacttcttgaactaaattatgattctatcggaacgaagaacggtgaatttggtcagtgcagattggcattggatgttttgttgccattgtgtgtggttgtgttgctatacacaaccaggcacatttaagcctgcactctgcataaaagtgcgtgtgtagatagaaacagattccagaagttcctttttcttgggttatgtgttatatgtatggaaaaaaaaaacatatattttgtagtgtggtaagttattatcctacttccgcagccctacctgtgtttctttgtgtttttggtgttggaaatataccagtaatgcatggtgcttgctgaggaatggaaagaggatttcaaacttggatgatttgaagcacaattatttgctatttctgatattggaattaagtaatattccttgaatggtttgtccatgcaagaataggtcagcttgcattacagagtctagtatcacttatgttgttagttcaacttgatcttttggtttcagcatgagcatgaacacaaatcacacgtgcacacttgtgtaatctagtttgcgggtgcagtacgctgtaatttctaagggaatgtaggaacaagggtatttgctgcattgctctgtagtttctaagggaaagtaattgtttattgttatgtccaaggacggaacggaacataatcgttgcagttttcacatgggaatattcaccctctggttgcaaaggagtgtcactctaagttaaacctttaaagtttggttgtcgttaatatcaatgaatttgcaatgaacatctttgtagttatttgtggtaaaatgttcctctctttatagaatagttaacactgcacatgtaaaagtgatatgtgtacatgttcatcagaagcaatactcccaccatttcagaatgtaagatgtatcagtatcagaatgtaatatatttgttccagtgatagtcgaacttgaagaaggttgacttaggacaaaaaccaaaacatcttcgattctggaatggaggtagtattcataatattggaaatccattatgtttgatatgcacgataatatagatattggtagtccagtataagttatatagatggtgtcactagctagaataataatagcatcattggaagcattttaactatagcaacttcaggggatggaatggtggataatgaatacaagctagtgtgtatgcctagtatatttttcactaattctttgtattatgtgtttttattctagggaaacattcatgctagtagtggagatgggatgaaagagcctgatggtcctattcaagcactgaaaaggtaaacgttattgcaggcttgcagcccaaaagtgaagtatcgatgtctttactgaggtgctaaagctattttcttttacatgcattaacattgcagatctagaggtcctgagccagaaccagaaattatagcgcttcttcattgaaaaactacagatagaggctagaagaatggattacagtagacttccccaacttaagagggaattgaagccaataatcgcatcttgacaacattgtcgcgttgcttcaaaatgaaaaaaaaaatccagttcgtcttaccctgtacatctgttggtgtttctgattgatgcctgttagatattccaattgttgatatctggtcttttttttttagcgtatcatgttttaaaatgacaccttgctaggtcttctaaaaatgtttttgctgttggtgggggattgattcatttagtttgtttgactcctcatgcactaaactaagatgggtagtgtaaatgtgatatttatgttggtagcctagttgctgcataatttagtttccactgttggcatttgggtaactgtttcgtgtaaggatggagattcatccaaatggtaaaggttgaaatgctattgctgtgagatctgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0316100, RefSeq:Os06g0316100