Os06g0316600
| Gene Name |
Os06g0316600 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001187823.1 GI:297724776 GeneID:9270310 |
| Length |
16959 bp |
| Definition |
Oryza sativa Japonica Group Os06g0316600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:12301995..12318953 |
| Sequence Coding Region |
12301995..12302057,12302229..12302561,12302604..12303264,12303598..12303924,12317373..12317561 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:12301995..12318953 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:12301995..12318953 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtcgatgaagtatgatctaccgctgctagactacaagacgagattctcgctgtggcaagaaaagactgctgcagaattttggctcaaactggaatcgatctgcatgtctaaagatctaaccagtaagatgcatatcaagatgaagttattctcgcacaagttgcaggagagtggttctgtgttgaaccacatatcggtcttcaaggagatcgttgccgacctagtgtcgatggacgtacagtttgatgatgaagatttaggtcttttactgttatgctcactgcctagttcatatgcaatttttcgtgacaccatatttttaagccgtgatgaactaaccctagcggaagtctatgaggcgctccaaaacagggagaagatgaaatgtatggtcagaggcagatctgagcagagaacctacaacgacagcaatgatcgtgacaagagtcagagtagaggccgttctaaacctagaggtaaaaagttctgtaagtattgcaaaaagaaaaatcacttcattgaagaatgttggaagctacagaacaaggagaaaaggaaatatgatggtaaggcctctgttgttaccagtgctgataactctgattcaggagattgtcttgtcgtttttgctggttgtgttgctagtcatgatgaatggatacttgatactgcatgttcgtttcatatctgcattaacagagattggtttagttcttacaagtctgtgcagaatggagatgttgtgcgcatgggagatgataacccacgtgggatcatgggcattggctccgttcagatcaagacacatgatggcatgacacgcacgctgaaagatgcgagacacataccagggatggcgagaaatctcatctctctcagcacacttgattcagaaggatacaaatactctggttcaggtggagttgtaaaggtatcgaaaggttctctcgtttatatgattggtgatatgaattctgcaaacttatatgtccttagaggaagtacattacatggttctgttaccgctgctgctgtttctaaagatgaacctaagtggaaagtcatgatagaaaggcaaactgaaaaggaggtaaaagtacttcgcactgacaatggtggtgaattttgttcggatgcttttgatgattactgcaggaaggaaggcatcgttaggcatcacaccatcccgtacactccacagcagaatggtgtggctgagcacatgaacagaaccatcatctccaaggctcgttgtatgctgtccaacgctcgcatgaacaagcgtttttgggcagaggctgctaacaccgcctgctacttgatcaacaggtcgccttctatctcacttaataagaaaactcccattgaggtatggtctgaacaggtggagaatactcttgagccagccacatacactgaagctgttgtctctagagaccgtgagaagtggatctcagctatgcatgaggagatgcagtctcttgagaagaatggcacatgggagcttgtgcacttgccaaaacagaagaagcctgttcgtattaaatggatcttcaagagaaaggaggctttacaatgtgctagtactgatgaggatgtagaatacatgtctagagttctatattctagtgctattgattttttgatgtatgccatggtttgctcccgtccagatttatctcatgctatgagtttggttagtagatacatggctaatcctggtaaagaacactggaaagctgttcagtggattttcaggtatctcagaggcacagctgatgcttgcttgaagtttggcaggactgataaggggcttgttggatatgtggattctgattttgctgcagatttggataagagaaggtcactcacgggttatgtgtttaccattggcagttgtgctgtgagttggaaggcaacattgcagcctattgttgcccagtctaccactgaagcagaatacatggctattgctgaagcatgtaaagaatcagtttggttgaaaggattgtttgctaagctttgtggagttgattcttgcattaacttgttttgtgacagtcaaagtgctatatgcctcactaaagatcagatgtttcatgagaggacaaagtacattgatatcaagtaccattatgttcgcgatgtagtcgcgcaaggtaagctgaaggtatgcaagataagtactcatgataatcctgctgatatgatgacaaagcctgttcctgttgctaagtttgagctttgctcaagcttagttggtatagtggtttag</cdnaseq> |
| Protein Sequence |
<aaseq>MASMKYDLPLLDYKTRFSLWQEKTAAEFWLKLESICMSKDLTSK MHIKMKLFSHKLQESGSVLNHISVFKEIVADLVSMDVQFDDEDLGLLLLCSLPSSYAI FRDTIFLSRDELTLAEVYEALQNREKMKCMVRGRSEQRTYNDSNDRDKSQSRGRSKPR GKKFCKYCKKKNHFIEECWKLQNKEKRKYDGKASVVTSADNSDSGDCLVVFAGCVASH DEWILDTACSFHICINRDWFSSYKSVQNGDVVRMGDDNPRGIMGIGSVQIKTHDGMTR TLKDARHIPGMARNLISLSTLDSEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLR GSTLHGSVTAAAVSKDEPKWKVMIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIV RHHTIPYTPQQNGVAEHMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIS LNKKTPIEVWSEQVENTLEPATYTEAVVSRDREKWISAMHEEMQSLEKNGTWELVHLP KQKKPVRIKWIFKRKEALQCASTDEDVEYMSRVLYSSAIDFLMYAMVCSRPDLSHAMS LVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRTDKGLVGYVDSDFAADLDKRRS LTGYVFTIGSCAVSWKATLQPIVAQSTTEAEYMAIAEACKESVWLKGLFAKLCGVDSC INLFCDSQSAICLTKDQMFHERTKYIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMT KPVPVAKFELCSSLVGIVV</aaseq> |
| Gene Sequence |
<dnaseqindica>1..63#235..567#610..1270#1604..1930#15379..15567#16253..16959#atggcgtcgatgaagtatgatctaccgctgctagactacaagacgagattctcgctgtggcaagtcaagatgcgggctgttctggcgcaaatttcggatcttgatgaggcactggaaagcttcgggaagaagaaaatgactgactagaccgctgaggagaagcggaaagatcgtaaggctctgttgctgatccaacttcatctatctaatgatattttgcaagaagtgttgcaggaaaagactgctgcagaattttggctcaaactggaatcgatctgcatgtctaaagatctaaccagtaagatgcatatcaagatgaagttattctcgcacaagttgcaggagagtggttctgtgttgaaccacatatcggtcttcaaggagatcgttgccgacctagtgtcgatggacgtacagtttgatgatgaagatttaggtcttttactgttatgctcactgcctagttcatatgcaatttttcgtgacaccatatttttaagccgtgatgaactaaccctagcggaagtctatgaggcgctccaaaacagggagaagatgaaatgtatggtttagtctgatgcgtcgtcctctatgggcgaagcattgcaggtcagaggcagatctgagcagagaacctacaacgacagcaatgatcgtgacaagagtcagagtagaggccgttctaaacctagaggtaaaaagttctgtaagtattgcaaaaagaaaaatcacttcattgaagaatgttggaagctacagaacaaggagaaaaggaaatatgatggtaaggcctctgttgttaccagtgctgataactctgattcaggagattgtcttgtcgtttttgctggttgtgttgctagtcatgatgaatggatacttgatactgcatgttcgtttcatatctgcattaacagagattggtttagttcttacaagtctgtgcagaatggagatgttgtgcgcatgggagatgataacccacgtgggatcatgggcattggctccgttcagatcaagacacatgatggcatgacacgcacgctgaaagatgcgagacacataccagggatggcgagaaatctcatctctctcagcacacttgattcagaaggatacaaatactctggttcaggtggagttgtaaaggtatcgaaaggttctctcgtttatatgattggtgatatgaattctgcaaacttatatgtccttagaggaagtacattacatggttctgttaccgctgctgctgtttctaaagatgaacctagtaagactaacctatggcacatgcgtcttggacatatgagtgaacttggtatggcagaattgataaagaggaacctactggatggctgcactcagggtaacatgaagttctgtgagcactgtgtttttggtaagcacaagagggtaaaattcaatacctcagttcatcgcaccaaagatatacttgattatgtacatgctgatttgtgggggccctctcgtaagccctctcttggtggtgcttgttatatgcttaccattattgatgatttcgctagaaaagtgtggccttatttcctgaaacataaagatgatacatttgatgcttttaaagagtggaaagtcatgatagaaaggcaaactgaaaaggaggtaaaagtacttcgcactgacaatggtggtgaattttgttcggatgcttttgatgattactgcaggaaggaaggcatcgttaggcatcacaccatcccgtacactccacagcagaatggtgtggctgagcacatgaacagaaccatcatctccaaggctcgttgtatgctgtccaacgctcgcatgaacaagcgtttttgggcagaggctgctaacaccgcctgctacttgatcaacaggtcgccttctatctcacttaataagaaaactcccattgaggtatggtctggtatgcttgctgattattcacagttgagagtttttgaatgcactgcttatgctcatgttgataacggaaaattagagcctagagctattaagtgtctgtttcttggttatggttcaggagtaaaaggatataaattatggaatcttgaaactaataagaccttcatgagcaggagtgttgttttcaatgaatctgttatgtttaatgacagcttgcccacagatgtcataccaggtggttcagatgagaagcaacaatatgttagcgtgcaggtggagcacgtggatgatcaggaaactgaaattgttagtaatgatgttaataatactgttcagcactcacctcctgttttgcagccacaagatgaacctattgcacatctgtcggtgacatgggaccgggggtatcttgactagaggtttggagcagctgcagtcacccacgtggcctgacccccttggggggggggtcgggcccgagggtgatgtggccgcccctccctctgtctccccgaggggtcgggccgctcccgtttcggccccgagggctggggcgccccgaccccctgtgggtttggcgccacgtgtgtgggttaggtgagcacagcggcgctcacctaaccgcgtttattgcgggttggacgagcgccccacgccgcatttaatgcagcgcagcacactcgttcggtccgtgacaggtcacagtgtgtgaccggtcacagaccggtcagatcgcgggttaggtggcaacaggcggcctgacacacgcctcgccccgtcccgtcggaatgatgagagcctccaggcactcgtccctagccggagccggcgtgggaactcctggagttggcacgtcagccccggccagatacattccaggcttcatcgcaaccattgcaaggaagtcattgtatgaagaagggcagacgtgtagcatgctaaactgacacgtggtggacaagaatgaccggtctgtgactggtctgacgccggtcgcgtcatcggcagacaaccgtgctcccacgatgcatctgcctccggtggagtggaggtaggtatgacccatctcgtcggatggtcatttggaaagcagccatggcaaatctctgcccattaatgagggagtaacagggagatccccggtgtcaggcgagtgacggcgctgagcctcactcaaggacaagttgtgatttaacttccaggcgaaggtgcaagccaagtttgggtcaagatagggtagatccccacccagaagaaaagtaggtagaagtggtgcatgtggtatccccttgagatataaaaggaggaccttgcccaccaaaaaaaaaaagaaaaggcagaaaggggggggcgagaggggttctggagcctgaactctctggctctccggctctctgtaactccttcacacacagatccaccagaacacaggagtagggtattacgcttctcagcggcccgaacctgtctacatcgcccgtgtctcatgcacttgctctctcgcgaaccttccccagatcaatcgagggcgaagaacctcacttagcgcccccggccgaaccggcaaaggggggcctgcgcggtctcccggtgaggagctccacgctccgtcatctagcgcgccaggtagggggcgcgtgtgtctttctaagccctcgtcctctttcttgtgcgccaagcttctcccgctcagccccatggccgaacaggcagtggcgcacaatctctctccgagcgctagcggtgacgacggggagcagaacccgcgccgtcgagctcgtactccactgtccccctctcgccgaggtcttgcgcgggaggaggcgctcgaggaggtcgaaagatctgcgacttcgccgcacgcgggcgatggagaaggacggcgagacggggagcgtcgtcttctcgtctacggtgatggcagcacgccccagggcgcgctccaggctgcgggcgcgctcctgcgtcacccgcccgtcatccctgatccagagactccaacccgacgttggctagatgacgtggccaatttggtcatgacggcgcagcagcgcctaggcgccggctggcggtcctccgccaccaaggccactggcgttgctactgctggctccgtgtcgtcgaggcggagggcgcggcgagcggcggccgttacccgccgttcgtccgcctttccctcgtcaacgcctccaacccaagaagatgtgcgtagggggctagatgcccgcttcaatatcgagcgccggcgcaatgatcgccgtgctgcccacgcatcggagggcgcttcctcgtccggagcgccacttcggtccgggcacgggggccagccccccgtgtccccggttggcggtgccggctgtcgagcctttgtggcgagccttcggaacgtccgttggccccaaaggttccggcccaccatcaccgaaaaatacgatggaagcgtcaaccccgccgagtttctccagatctacacgactgggatcgaggccgccgggggtgacgacagggtcatggcgaatttcttccccatggccctgaaaggactggcgcggggttggctaatgaacttgccacccccgtcggtccactcttgggaggatttgtgccagcagttcactatgaacttccagggcacatatccgtgcccaggtgaagaagcggacttgcacgcggtacagcgaggggacgatgagtctcttcgctcgtacattcagcggttttgtcaagtccgcaacaccataccgtgcatccctgcacacgcggtgatctacgcgttcagggggggcgtgcggcacaaccgcatgctcgagaagatcgcctccaaggagccccagaccaccgcggagctttttcagctcgcggaccgtgtggctcgcaaggaggaggcctggacttggaactcctccggttccggtgtggcagctccggccgcccccgggcccgctgctcggtcagggcggcgggacaggaggaggaagaagaggtcggcccattccgacgacgagggtcacgtcctcgccgtcgagggcgcttcgcgggccacccgaaaggggaggcctgcgagcgacaaaaagaagtaggccggcgctcctagtagggagcgcccgaccggcaagtggtgcaccatgcacaacacctccctccacgacctcgtggactgccgcgcggtcaaaagtttggctgagcggacgaggaagtgggaggaggagaggaggcaggagcgccgtgagggcaataccccggcagctcccgccggcaaccggcgaggtgaggccaagcagaaggcccccgccgaggacatcaacgatggcgacgatgacctagggttctaggagcctgaggccaccgtcgccaccgttgatgggggagcgtgtgctcacgcttctcgccggagcctcaaggccatgaagtgagagcttctggccgtggcccctacccatgaggcgacgcggcgggcgcggtggtcggaggttgccctcaccttcgaccagaccgaccacccaccgtgtgttgcccggggaggacagatcgcgatggtggtttcccccaccgtttgcaatgtgaagttggggcgtgtcctcattgacgggggtgcagccctcaacatcctttcccccgctgcctttgacgccatcaaggccccggggatggtgctccggccgtcctagccgatcatcggtgtgacgccggggcacacttggccgctaggccatatcgaccttccggtcaccttcggtggttccgccaacttccacacggagcgggtgaacttcgatgtggcggacctcagtctgccctacaacgcggtcctggggaggcccgcgttggtgaagttcatggtggcggtccactatgcctatctccagatgaagatgccgggccccggtggccccatcaccgtccatggcgacctcaaagtcgcgcttgcttgcatggagcagcgcgcggaccatctcgccgcggcatccaagcccgcgggtggcgacgagaggctcagcacctctgtcccagccgccccgaggcagcggatgatcacgtgcgatgaggtcccgatcaagcaggttgccctgggcgacggcccgtccaagaccacacgaatcggtggtcttctggacgacaaataggaagacgcgctcgtctccttcctgcgggcaaacgccgacgtcttcgcctggagaccggcggacatgcccggggtccccagggaggtgattgagcaccgtctcgccgtacggccgggcgcaaggccggtccggcagaaagtgcggcggcaggccccggaacgtcaagccttcatccgcgaggaggtggcgcgacttctggaggccggattcatccgagaggtcatccatccggagtggctggcgaacccggtcgtcgttcccaaggcgaacggcaagcttcggatgtgcatcgactataccgaccttaacaaggcatgtcctaaggacccttaccccctgccacgcatagatcagattgtcgactccaccgcggggtgcgaccttttgtgttttctagatgcatactctggttatcatcagattcgcatggctagggaggatgaggaaaaaactgcattcattacccccataggaacttattgttatacgacaatgcctttcgggttaaagaatgcaggtcctacttttcaacgtactactcgaatttctttgggtagccaaataggacgtaatgttgaggcctatgttgatgacttggttgtgaaaacacgcaaccaggagaccttactctcggatctagcggaaactttcgaaagtctccgcaccgcccgcataaagctgaaccccgacaagtgcgtgttcggcgtgcctgcgggcaagcttctcgggttcttgatctttgcccgaggcattgaggccaaccccgagaagatacgagctatagagcggatgcgcccccccagcaaacttagggatgtgcaatgcgtcactggctgtatggccgccctaagtcggttcatatcgaggctgggagagaaggcgctacccctatttaagctcctcaaacgctccgggccgtttatctggacgtaggaggctgaacgggccctcactcagttgaaggcgtacctcagttctcccccagtcctggtcgccccggagccagatgagccgttgctactctacctggcggcaactccgcaggtggtcagcgcggcgttggtcgtggagcgcgacgaggacgaccctcgctccgcgcatccccaccctgtgtcgactcgacccgggagagagcagggaggagaggcccccgagccgaacggtggcccgaggcccccgacgaccggagctggccctctgcccgcttgtccgacggtgccaggcgcccccgacccccaggatggccccggggccactgcgggaaggccgcgcctgtcgccctctgaccccgaggtcgtcggcacagaagccgagtgcgccctgcgcggcctctcggacgaagagcaccctgtatcgactcgacccgggagagagcagggaggagaggcccccgagccgaacggcggcccgaggcccccgacgaccggagctggccctctgcccgcttgtccgacggtgccaggagcccctgacccccaggatggccccggggccactgcgggaaggccgcgcctgtcgccttccgaacccgaggtcgtcgacacagaagccgagtgcgccccgcgtggcctctcggacgaaaagcgccctggagatgcggcccctggcgaagaggatcggccccgccaaaaggtgcagcggcccgtctactttgttagtgaggccctccgggacgccaagaccggatacccttaggcccagaagatgctttacgctattctgatggcttcgaggaagttgcgccattatttccaggcgcatcgggtcacggtggttacgtcctaccccctcggccaaatcttgcataaccgagagggtactggacgggtggtgaaatgggcaatcgaactctcttagttcgatttgcactttgaaccacgccacgcgatcaagagccaggccctcgccgactttgtggcagagtggacaccggctcccgagcccgtctccatccccgaggccagctcgggcccttcgcagctgcctcacaccgcctattgggtgatgcagtttgacggctccctgtctcttcagggcgccggtgcgggggtcacgttgacctcgccgagcggagatgtcctcaaatatctggtccgcctcgactttcgggcaaccaacaatatggcagagtacgagggactccttgcgggactcagagtggcggctggactggggatccgccgcctcctggtgttaggcgactctcagttggtcgttaaccaggtctccaaggagtaccagtgctctgacccgcagatggatgcttacgtgcgccaggtgcggcgtatggagcgccattttgacgggatagagcttcggcacgtgcccagacgggataacgcggtcgccgacgaactctcaaggctcgcttcctcgcgagcccagaccccaccgggcgcctttgaagaaaggcttgcccagccgtcggcgcgacccgaccccctaggggagacggacgcgcctgaacggcccccgaggcccgtcggagtccaggcctcgggacccgaggggagcgctcccagctcccttagattgattgcttggatcgctgagatccaggcgtacctcgcagataagactctacccgaggaccgcgaagggagtgaacgcgtccagcacatctccaagcgctacgtgctggtggaagggaccctctatcggcacgcggctaacagagtcctcctgaagtgcattcctcgggaacaaggcgtcgagcttcttgccgatatccatgaaggcgagtgcggagcccactctgcctcacgcaccttggttggcaaggcctttcgccagggtttctattggccgacggctctcaacgatgcggtcgacctggtccggcggtgcagggcgtgccagttccacgccaagcaaacccatcagccggcccaggccctgcagaccatacctctttcatggccgtttgctgtctgggggctcgatatcctgggtccgtttagacgggccccgggcgggttcgagtatctgtatgtcgctatcgacaagttcactaagtggcccgatcatcaagatcgataagcactccgcacttaaattcatcaggggtatcactgctcggtttggggtgcctaaccgtatcattacggataacggcacccagttcactagtgagctcttcggtgactactgcgaagacatgggcattaagctctgcttcgcctctcctgcccaccccagaagcaatggccaagtggagcgcgccaacgcagaaatcctcaagggcctcaaaaccaagaccttcaacatcctcaagaagcacggcgactcgtggatcgaggagctaccagcggtgctctgggcgaaccgaaccacgccaagccgagcaaccggggaaatgcctttcttcctcgtctacggcgcggaggcggttctcccatccgagctcaccctgaggtcccctcgggccaccatgtactgcgaggctgatcaagatcagcttcgcagagatgacctcgactacttggaagaacgaaggcggcgcgcggccattcgagccgcgcgctaccagcagagcctgcggcgctaccatcagcgtcacgtccgggcccgatcactctgcgtcgacgacctcgtcctacgccgcgtccaaacgcgtgctggactgagcaagctctcaccaatgtgggagggtccgtatcgagtgatcggcgtcccccggccgggctccgttcggctggccacgggcgacggcacagagctgcctaacccgtggaacatcgaacaccttcatcgcttctacccctagtgggggtcgggtgtcaggtctcgggctcgggccaaccccgcacccccctcgggcgtgcagggttggccgggggctaccacatatgtatatacttatcttttttct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