Os06g0320100

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Revision as of 09:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0320100| Description = Protein of unknown function DUF773 family protein| Version = NM_001064045.1 GI:115467821 GeneID:4340889| Length = 33...")
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Gene Name

Os06g0320100

Description

Protein of unknown function DUF773 family protein

Version

NM_001064045.1 GI:115467821 GeneID:4340889

Length

3303 bp

Definition

Oryza sativa Japonica Group Os06g0320100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12502130..12505432

Sequence Coding Region

12502216..12502411,12502605..12502699,12502812..12502906,12503018..12503153,12503278..12503427
,12503515..12504036,12504286..12504494,12504616..12504748,12505018..12505158

Expression

GEO Profiles:Os06g0320100

Genome Context

<gbrowseImage1> name=NC_008399:12502130..12505432 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12502130..12505432 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgaccaggcggagatctgcagcctccccatcgacatcgccttcggccgcctgcaggagtggctggtggaccgcaagcgggtgccgcaggactggaggaagcgcctcgccggcatccgcgcccgcctcgccgccgccttcgcctccctccctcgcgacctcgacccctccctcctcgccctcgagccggacgaaattgggtatcttgaagcaaagaaaatatacggcatcctcttggaatccaacccggagagtaggaacatatttggccgcctgactggctcagcgggtgaatgggaggccattgttaaagcttatgagaaggaccatgtttttctcggggaggcagctcagatcatggtccagaatgtgaactatgacattccttatcagaggaagcagatgcaaaagactcaacaacagctcgcagagctggatagaagggaggctgacattaagcgacttgcagctctgtccgcaaccagatatgcagaggcttgccaggagcttggtctgcagggaattaatgtgcggcaagaactgatagagtctgcaaaaacacttccttcaacgtttacaaaaatcttggaggttctgaacagtgatcctgtctcaatagctaccgagtactatacaactttcgtaagggaatgccatactgaggataaggaaaactgcaaatctgtgctacagaatctgaaacagttgcaggctaatcctccctcccttcatatctcagtatgcaatgaggttgaatcttctcttggagagacatcaaaagctctggagtctaatgtgactggggcagaaaacattgactcaaatatatctgcagatgacattgattgggacatctctttggatgataatggaattgattgggacattggtgctgttgaacaacctgtagaagaatctggcaatggttttggatcgtatgaaattattgatgccaatgtagagttggcaggttctgaaaattataattttggtatttcagatgatccatctgtgaacaagtctagttcatctgagcctggtatttgctgggacatcactgatgttaatcctgaagaaaatgctagtatacagaatgctcctgaatcaggacagtctcaaagtttagctgaagaaagaagccagttactagagaaggaatatagaaataatattcttgatgatttacttgaggtaagagcatttttgacccaacgcttaggggagatgaggaatgctgatacatcatctctacagcatcaagtgcaagctgtctcaccttttgttctgcagcagtatgctcctgaaaatttagagaatatgcttgcagaggtctcatcagctatatctttgctcagtaaccagaaaactcttgaccttataatgattctcaactcaaaaaggtttttagacagattagtatcaacattagaagacaagaagcatcatgaggtgaaactacgagaaggcttaggtgatttgtcagttaagcgaatggagctgcaaaatgcactttcgtcatcctggcctaagcaagaggcagcaattacaaaaaccagggaactcaagaagctctgcgagacaacgctatcaactgtatttgatggcaggccggtgcatataattggagagatcaatactttactaagttcgagtgttagtcaattagctggatga</cdnaseq>

Protein Sequence

<aaseq>MHDQAEICSLPIDIAFGRLQEWLVDRKRVPQDWRKRLAGIRARL AAAFASLPRDLDPSLLALEPDEIGYLEAKKIYGILLESNPESRNIFGRLTGSAGEWEA IVKAYEKDHVFLGEAAQIMVQNVNYDIPYQRKQMQKTQQQLAELDRREADIKRLAALS ATRYAEACQELGLQGINVRQELIESAKTLPSTFTKILEVLNSDPVSIATEYYTTFVRE CHTEDKENCKSVLQNLKQLQANPPSLHISVCNEVESSLGETSKALESNVTGAENIDSN ISADDIDWDISLDDNGIDWDIGAVEQPVEESGNGFGSYEIIDANVELAGSENYNFGIS DDPSVNKSSSSEPGICWDITDVNPEENASIQNAPESGQSQSLAEERSQLLEKEYRNNI LDDLLEVRAFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQYAPENLENMLAEVSSAIS LLSNQKTLDLIMILNSKRFLDRLVSTLEDKKHHEVKLREGLGDLSVKRMELQNALSSS WPKQEAAITKTRELKKLCETTLSTVFDGRPVHIIGEINTLLSSSVSQLAG</aaseq>

Gene Sequence

<dnaseqindica>87..282#476..570#683..777#889..1024#1149..1298#1386..1907#2157..2365#2487..2619#2889..3029#gtttcgtctccccgatcgcctccggcctccgccgctcgccgctcgtttccgccgccgcgcgatccggcggccggaaggcgtcagccatgcacgaccaggcggagatctgcagcctccccatcgacatcgccttcggccgcctgcaggagtggctggtggaccgcaagcgggtgccgcaggactggaggaagcgcctcgccggcatccgcgcccgcctcgccgccgccttcgcctccctccctcgcgacctcgacccctccctcctcgccctcgagccggacggtaaaacccccgcatccccgcttcctaaacccccacccttcctcctccgcgctctgctcctctcgcagtgtagatttgggcgaattgggggctatagagcccttcccctgtagattcctttatctgctgctgctggtgcgatttggttgttcctgtgtggaatgtaattgtgtgtatcactttcttggagtagaaattgggtatcttgaagcaaagaaaatatacggcatcctcttggaatccaacccggagagtaggaacatatttggccgcctgactggctcagcggtaagcaacaagaactgctattcttctgagagttagattagatgtaggttgtagcacactagtgtgtatgtgtatggaactgaatacacatctatgcaaatgttgtatccagggtgaatgggaggccattgttaaagcttatgagaaggaccatgtttttctcggggaggcagctcagatcatggtccagaatgtgaactatgacatgtatgtacggtgcccattcctcattcatgggtttgactactcgctcactgtatttgtgcttgaactagctttgcaatggctaactttacttgctgttctgactggatgtagtccttatcagaggaagcagatgcaaaagactcaacaacagctcgcagagctggatagaagggaggctgacattaagcgacttgcagctctgtccgcaaccagatatgcagaggcttgccaggagcttggtctgcaggttatagcttctccatttcactatctatatgtagcaccgtgcgagttgtgtgttcctgactagtatgctgtatgaggtgttatactgatgtgcgcatgccgcttttgctttttcttggccgtagggaattaatgtgcggcaagaactgatagagtctgcaaaaacacttccttcaacgtttacaaaaatcttggaggttctgaacagtgatcctgtctcaatagctaccgagtactatacaactttcgtaagggaatgccatactgaggataaggtataatcaggacatatcagatattgaatatataaatatacaaaatgaacttcttgtgaacttaacgctttgttcttctgaatccaggaaaactgcaaatctgtgctacagaatctgaaacagttgcaggctaatcctccctcccttcatatctcagtatgcaatgaggttgaatcttctcttggagagacatcaaaagctctggagtctaatgtgactggggcagaaaacattgactcaaatatatctgcagatgacattgattgggacatctctttggatgataatggaattgattgggacattggtgctgttgaacaacctgtagaagaatctggcaatggttttggatcgtatgaaattattgatgccaatgtagagttggcaggttctgaaaattataattttggtatttcagatgatccatctgtgaacaagtctagttcatctgagcctggtatttgctgggacatcactgatgttaatcctgaagaaaatgctagtatacagaatgctcctgaatcaggacagtctcaaagtttagctgaagaaagaagccagttactagagaaggaatatagaaataatattcttgatgatttacttgaggtatgcttttgtgcagtttttaattgttgcattatcctgtgagttccaactataactacacttgagtgtcatgttgcacaattgtacctattattactaactaatatgaacatccttatgtttttatgccaaagtctctcttttactaatatgaacacttgagtggcatgttgcattaggctgcttggccagcctatcctctttcacttaataatactacatttccattaatttctgacacttcaacaggtaagagcatttttgacccaacgcttaggggagatgaggaatgctgatacatcatctctacagcatcaagtgcaagctgtctcaccttttgttctgcagcagtatgctcctgaaaatttagagaatatgcttgcagaggtctcatcagctatatctttgctcagtaaccagaaaactcttgaccttataatgattctcaactcaaaaaggtataagagttattccacaacatttactcgaagacttaaatagtacataattttgtatgccatcaatatatgcattttttttaacatttctttaactggatatttcttttgtctttcaaaggtttttagacagattagtatcaacattagaagacaagaagcatcatgaggtgaaactacgagaaggcttaggtgatttgtcagttaagcgaatggagctgcaaaatgcactttcgtcatcctggcctaagcaagtaagttattatttctccatcagtgtctggttacatgtatatgcttatcctaaacagattctggactataaatgatatcagtaattgggtgaaaataccactttttttgaacaatggcattccctttcgtgctctcaacataccgagatactagttcttttttttttcctttactgtccatcatgtgtgataaggcaaaacaccaatattcttcagaagctttctatagccaaaaagatttggtagtgattagctttgtaatgtgacaggaggcagcaattacaaaaaccagggaactcaagaagctctgcgagacaacgctatcaactgtatttgatggcaggccggtgcatataattggagagatcaatactttactaagttcgagtgttagtcaattagctggatgactgtactagccggatgactgtacctgaaataagatgagattgaaagctggttgattacatcaaggttcatactttaacaacttgtctggttgtacttgggttatttttgctgcctgaatcaaatgttcttttgtgtatgattgctgccccggagtgggtgataaagactgaagatggcgaagttaaatatgttgtggagaaaaattccattgctaacaagcagatatcaatggtttgaatatcaaataatcgatatcttaatatcaatgatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0320100, RefSeq:Os06g0320100