Os06g0325500

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0325500| Description = Protein of unknown function DUF89 family protein| Version = NM_001064059.1 GI:115467849 GeneID:4340905| Length = 499...")
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Gene Name

Os06g0325500

Description

Protein of unknown function DUF89 family protein

Version

NM_001064059.1 GI:115467849 GeneID:4340905

Length

4990 bp

Definition

Oryza sativa Japonica Group Os06g0325500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12776113..12781102

Sequence Coding Region

12776244..12776413,12776501..12776566,12777642..12777708,12777792..12777860,12777975..12778115
,12778406..12778534,12779206..12779292,12779868..12779942,12780043..12780120
,12780218..12780295,12780377..12780439,12780545..12780619

Expression

GEO Profiles:Os06g0325500

Genome Context

<gbrowseImage1> name=NC_008399:12776113..12781102 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12776113..12781102 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagctcgtcgccgtcggtgccgttcccgctgctgcaggcgccggtggagagcacgtacagggcctgcaccatcccctaccgcttcgcctccgacaacccgcgaaaggccacccccgtcgagatccagtggatcgacctcttcctcaactccgtcccctccttcaggcagcgcgcggagaacgaccccacggtgcccgatgcgcccgccaaggccgagaagtttgcccagaggtacactgcaatgctcgaggagttgaagaagaacccagagagtaatggagggccaccagattgcattcttctttgcaggcttcgtgagctagtccttagagaactgggatttagggatatattcaagaaggttaaggatgaggagaatgctaaggctatgtcactctttgagggcgttgttcagcgaaatgatgagattgaagatgatggaaaacgagcagagaacttgatccgtggaatcttagcaggaaacatatttgacttaggatctgcacagcttgcagaagtttttgctaaagacggtatgtccttcttagcgagttgccagaatcttgtatctcgaccttgggttatcgatgacctggatgcatttcaaaataaatggactaagaaatcttgggaaaaggctgttatttttgttgataattctggcgctgatatcatcttgggcatattaccatttgcaagggaattgctccgacatggcacaaaggtgattcttgctgccaatgacatgccatcaatcaatgatgtcacttacccagagcttgttgaaattataaacaagctcaaggatgaaaatggaaagcttgcaggtgtggatgcatctgacctactcgttgccaactccggtaacgatttgccagtaattgatttgtccagtgtgtcaccagaactagcttatttggcaaatgatgctgacttggtcgttctagaaggcatgggaagagcaattgaaaccaacctatatgcacaaatgaaatgtgactcgattaagatcggaatggtaaaacatcctgaagtggcgcaatttttgggtgggaggctttatgattgcgtcttcaaattcaatgaggcctaa</cdnaseq>

Protein Sequence

<aaseq>MESSSPSVPFPLLQAPVESTYRACTIPYRFASDNPRKATPVEIQ WIDLFLNSVPSFRQRAENDPTVPDAPAKAEKFAQRYTAMLEELKKNPESNGGPPDCIL LCRLRELVLRELGFRDIFKKVKDEENAKAMSLFEGVVQRNDEIEDDGKRAENLIRGIL AGNIFDLGSAQLAEVFAKDGMSFLASCQNLVSRPWVIDDLDAFQNKWTKKSWEKAVIF VDNSGADIILGILPFARELLRHGTKVILAANDMPSINDVTYPELVEIINKLKDENGKL AGVDASDLLVANSGNDLPVIDLSSVSPELAYLANDADLVVLEGMGRAIETNLYAQMKC DSIKIGMVKHPEVAQFLGGRLYDCVFKFNEA</aaseq>

Gene Sequence

<dnaseqindica>132..301#389..454#1530..1596#1680..1748#1863..2003#2294..2422#3094..3180#3756..3830#3931..4008#4106..4183#4265..4327#4433..4507#cgtgcagaataaccacttcaccgccggatctcacggcgccccaagtttaggcggttacctaaccaccccacgaatcccagccgccgccgccgacgagcaggaggagcgatctgactagtaagccggagcacatggagagctcgtcgccgtcggtgccgttcccgctgctgcaggcgccggtggagagcacgtacagggcctgcaccatcccctaccgcttcgcctccgacaacccgcgaaaggccacccccgtcgagatccagtggatcgacctcttcctcaactccgtcccctccttcaggtaaggaaggcctccttgccccctgccgcccgcggcggattctgagctctactcggtccgtgttgattttgatctcccgcaacgcaggcagcgcgcggagaacgaccccacggtgcccgatgcgcccgccaaggccgagaagtttgcccagaggtatgtgcgcatccgctttggttagtgatcgatgattggttgatgattgcgcacgtttgtctcctggaactcaaggtaaaggtactggtaggtagtggtggatggtacatgcttgtttgcctgagatagagtagtactttgtttctatttttgggtgtggatgcatttccggggcatcaaacatataatgtgcgaaaagaccctttaatatggagttttcactcattcttggtctcaaaggtatgcctggtgtgtttagcatgtgtcgaaccatggtaatatccccttgtgtttagtttacggattgaggttagcactacttatccttttcttgccatgttttgcagccaaagtattgcacaattttagtctttatgaattggaaacataatcacccttccagtctttatattagtgttgtggaatgtgccatttgtgttaccctgataaataaaattatggaggaaggcactcgttggtcctgggaaactggaatttggatgtgcatccatttgaatgtgccaaataacccccagatgttattacccctctgtgctaaaagacatgtcatcctagaatagggtgtagtaaaaacatgtttatttggacaatattcctaaaaatacatagttttggtatatatgaaaatggtgcaagcaatccatcatgaaaaatattcacaactcttttcaaattagtcctaacaaagttcagtttcaaggtggcataaattgttactgaaaagtaaaacattcctcttttactggaggcaatactaatttggccatcaccagaaaagttgtgcccattttattttggtcatacaatatttgtctggaaaatgaaattgtctccatttatattgtttttctttgtcatgacttatgaatatagtccaattttatgtttcaagaatcagacatttaattaccatttggtcccatggctcttttactgcttccggaacaagcatgtctttgcgtcgtgcattttctccagattaatattaaccaaaccaactactgggcaatgctctaacattttattatgtctatctattgtatatatggtgaaggtacactgcaatgctcgaggagttgaagaagaacccagagagtaatggagggccaccagattgcattgtaagatattgatagatgagctctttgaactacaaaagaagatcttggattactgtgcactaactcttcgaatgaatctcaagcttctttgcaggcttcgtgagctagtccttagagaactgggatttagggatatattcaagaaggttaaggtaaatgccaacaaaggtttttcttgtcttcaaatactactttggagtctattgtcgtgacaattttacatggttgtaattatctatgcttgattgatgattttccatgattaggatgaggagaatgctaaggctatgtcactctttgagggcgttgttcagcgaaatgatgagattgaagatgatggaaaacgagcagagaacttgatccgtggaatcttagcaggaaacatatttgacttaggatctgcacaggtatgttttgtcacttgatgattatttttgttgaccttttcctgtggatagggcttcacaaagggttttccgtagtttctgttggtgcaccattggcttagtgtgaaaggccaatcagcgtgaagggcagaaccaacaaaattttcttcattatttccttctgattttttgaataattggtttgttgttgatgaaatgctcttatgttcattatttcattatttccttctcagaaggtttacatatgtcgccctgcctctaatgtctctgttttctttcacttctcttagcttgcagaagtttttgctaaagacggtatgtccttcttagcgagttgccagaatcttgtatctcgaccttgggttatcgatgacctggatgcatttcaaaataaatggactaagaaatcttgggaaaaggtaaaaattatcttccattataaactttaccgcaatcccatggcacacatcaactgggtgcaacaaacctagatataagatactgctaccatgcttttagtattgttttagttttgcatcatgtataaatattatgtatgagcctggatgcaagaatagaattctattggttcagaattattgtacgtacacatgtataatgtactctacaaatgttcatgtactcttttggttcttattaaagcatattagaaactctcccacttcttttgaaacaatattgttttgaagtttgtaactactgtgtaacttaaataattaatattcttacttgttactcccatgctgcaactttttcacatgtattcttctcatgttgtggataagtatcaaataattctcccaatggtatccaaggtgtcaatttattttagatttattaatttatttgttattgacatttatattttattagtatatttagtattagttcttgacatacacaacacctggccttgtgtagtccatatatgtacatgtcagtctgagctattcataataatctttcagctggagttctggacatatttattgtagggatattgcatattaactaacattgttatgtctttgttatacatagctgaatcattgctttgtcacatatgtaggctgttatttttgttgataattctggcgctgatatcatcttgggcatattaccatttgcaagggaattgctccgacatggcacaaaggtctgtctcaccctttttgtttctcttgtgattgctccagaactatttgaggaattatgttaggacaagagcagatgttgctatttgttccagccagcaacacattattaatgttgcgctatttttagggagttaaatgtaaaaagatcgatcgaaatgaacctctgattacattgaagtggatcatatttttggatatgtgaaatagtattgtgatttaagttgctaaatgtgagataacccacagcttaaacaagaaacaggaacaaccaaataaacttatgattttttaccagtccagactgcatcttattcccttttgagcacattgttttttttccaattcgcatggaaactacactgttaaatccatgtgaatttttaaatgatgtctttatctttatccatgagtaaaattgatatagttctttttttctttcggtagttgctgaagttgccttcatatgtacatctctagctatttcgagagtgtcttttgcatatattgtttgagatttgctatctttttctgttggtaaagaatgtcaataaatagctaccgttggattgtgtaggtgattcttgctgccaatgacatgccatcaatcaatgatgtcacttacccagagcttgttgaaattataaacaaggtaagaaacatgaaattgttataattgtgagacatgtttttttttcttttgcggggatctgagaaaagattatgaattatactcttgcaattattttcagctcaaggatgaaaatggaaagcttgcaggtgtggatgcatctgacctactcgttgccaactccggtaacgatttgccagtaagattatcttactatggtggtgtactaaactattttacctattgcattgtattatatgtgtaagttcttaactggatatctgtcttggtctcaggtaattgatttgtccagtgtgtcaccagaactagcttatttggcaaatgatgctgacttggtcgttctagaaggcatggtaagtgggcttgcaacattcacatctgtttgccttcacagggctaaaagcccatcacttttcaactcttttttgttacagggaagagcaattgaaaccaacctatatgcacaaatgaaatgtgactcgattaagatcggaatggtgtgttgcatttctctgcgattttataatttgtattgaatagttcattgcaagttaatcaatgattgagctttaaaaactgccatcatttcttccatgttccaggtaaaacatcctgaagtggcgcaatttttgggtgggaggctttatgattgcgtcttcaaattcaatgaggcctaaactttgataacatcagacacacatgcggttgctttatttcgttttcaactggtgcgaggctacactgaacatatcacatgtgctcgtccctttcatattaatagcaaggaaaataagttagatcatggcatttttagggaatgcaattacggaacttttaattcgtattgcactacgtgccttttcatctaggtagcggaatagtaaaaaggaaaaaaaaatcccttctgcgattcagattaataataacagttcaactaaagtacctccgtgttttatcatgttatttaattcgaacattgtttgataccggttctgcttctgataaaagtgccattgaagatcagttgtgttctgtattatactagcctaactacttcgcagaaaaatgggtgtatagtgtagcctttacttcggatttgggaagaagatgaattttgtaacagattgcgtggttgctgccaaaagattgaagatttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0325500, RefSeq:Os06g0325500