Os06g0327300

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0327300| Description = Similar to Thioredoxin reductase 1 (EC 1.8.1.9) (NADPH-dependent thioredoxin reductase 1) (NTR 1)| Version = NM_00106...")
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Gene Name

Os06g0327300

Description

Similar to Thioredoxin reductase 1 (EC 1.8.1.9) (NADPH-dependent thioredoxin reductase 1) (NTR 1)

Version

NM_001064066.1 GI:115467863 GeneID:4340912

Length

4072 bp

Definition

Oryza sativa Japonica Group Os06g0327300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12916699..12920770

Sequence Coding Region

12916923..12916993,12919716..12920623,12920707..12920750

Expression

GEO Profiles:Os06g0327300

Genome Context

<gbrowseImage1> name=NC_008399:12916699..12920770 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12916699..12920770 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgcgcctctgctccaagctcgcggcgctgctccggaggtcccgcgggcccgctgcgggcgcgcgtgtgcatcatcgggagcgggccggcggcgcacacggcggcggtctacgcggcgcgcgccgagctcaagcccgtgctcttcgagggcttcctcgccaacgacatcgccgcgggggggcagctcaccaccaccaccgacgtcgagaacttcccgggcttccccgacggcatcctcggcgccgacctcatggaccgctgccgcgcccagtccgtgcgcttcgggaccaggatcctcaccgagaccgtcaccgccgtcgacctctcgtcccgccccttccgcgtcgcctccggcgacaccgtcgtgcacgccgacgcggtcgtcgtggccacgggcgccgtcgcgcgccgcctccatttcgccggctccgacgcattctggaaccgcggcatctccgcctgcgccgtctgcgacggcgccgcgcccatcttccggaacaagcccattgccgtcgtcggcggcggggactccgccatggaggaggccaacttcctcaccaagtacggctcccgcgtctacatcatccaccgccgcaacgccttccgcgcgtccaagatcatgcaggcccgggccctctccaaccccaagatccaggtcgtctgggactccgaggtcgtcgaggcgtacggcggcgccgacggcggtccgttggccggcgtcaaggtcaagaacgtggtgagcggcgaggtctccgacctccaggtcgccgggctcttcttcgccattggacacgagccggcgacaaagtttctcggcgggcagctcgagctggactccgatggctatgtcgtgaccaagcccggctccactcacaccagcgtcaagggagtcttcgccgccggtgatgttcaggacaagaagtatcgccaggccattactgccgcgggatcaggttgcatggcggcgttggatgcggagcactacctacaggagattggagcacaggaagacaagactgattga</cdnaseq>

Protein Sequence

<aaseq>CASAPSSRRCSGGPAGPLRARVCIIGSGPAAHTAAVYAARAELK PVLFEGFLANDIAAGGQLTTTTDVENFPGFPDGILGADLMDRCRAQSVRFGTRILTET VTAVDLSSRPFRVASGDTVVHADAVVVATGAVARRLHFAGSDAFWNRGISACAVCDGA APIFRNKPIAVVGGGDSAMEEANFLTKYGSRVYIIHRRNAFRASKIMQARALSNPKIQ VVWDSEVVEAYGGADGGPLAGVKVKNVVSGEVSDLQVAGLFFAIGHEPATKFLGGQLE LDSDGYVVTKPGSTHTSVKGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHYLQEIGA QEDKTD</aaseq>

Gene Sequence

<dnaseqindica>3778..3848#148..1055#21..64#gccgccgccgccgcccttgatgcgcctctgctccaagctcgcggcgctgctccggaggtcccgccagttcgcgcccgcagccgccgccgcgtccgggtcagcgacggccgcggccgcgtcggcgaacgggatggaggaggcggccgcgggcccgctgcgggcgcgcgtgtgcatcatcgggagcgggccggcggcgcacacggcggcggtctacgcggcgcgcgccgagctcaagcccgtgctcttcgagggcttcctcgccaacgacatcgccgcgggggggcagctcaccaccaccaccgacgtcgagaacttcccgggcttccccgacggcatcctcggcgccgacctcatggaccgctgccgcgcccagtccgtgcgcttcgggaccaggatcctcaccgagaccgtcaccgccgtcgacctctcgtcccgccccttccgcgtcgcctccggcgacaccgtcgtgcacgccgacgcggtcgtcgtggccacgggcgccgtcgcgcgccgcctccatttcgccggctccgacgcattctggaaccgcggcatctccgcctgcgccgtctgcgacggcgccgcgcccatcttccggaacaagcccattgccgtcgtcggcggcggggactccgccatggaggaggccaacttcctcaccaagtacggctcccgcgtctacatcatccaccgccgcaacgccttccgcgcgtccaagatcatgcaggcccgggccctctccaaccccaagatccaggtcgtctgggactccgaggtcgtcgaggcgtacggcggcgccgacggcggtccgttggccggcgtcaaggtcaagaacgtggtgagcggcgaggtctccgacctccaggtcgccgggctcttcttcgccattggacacgagccggcgacaaagtttctcggcgggcagctcgagctggactccgatggctatgtcgtgaccaagcccggctccactcacaccagcgtcaagggagtcttcgccgccggtgatgttcaggacaagaagtatcgccaggccattactgccgcgggatcaggtatactactcaaagcttgtaataccaccagagtatgatgcacatttgtggcgattggagcatattgactttgataattcagcaatgcaattacttggtgtatcggcattcagatcgaagaccttcacaggctcaatgcttgtctgaggaaagggtcaggggtaaaaccataacagaatacctttcgttttctggtgatactagctaaaatgcctgtgcatttactatgggagtgaataatctatgtgtttttaaaaacaaacaatgtggtttttgcattaaacatgtccatcacccatttttgttcacaaatgtcaactgtgaaattaacttgtgcatatagatggaaatccaaacatcttagacttagccaggttaaaattatgattttacgaacttaaagaacacctatatctctactatacttgcaaaatacccattcaaagcagccatatttgcgcatcataggtgggtacgggtactatgaggatataatgtgctatgttggttcgctaacagtccgaactggcggattgttgtgaaaatggcaataacaagaaatgtctaattgaacaataacataaatgagaagcacaaaaaagtagtgcacttatgcataatggggtttgtcttggtggcataaacaggattttccctagatgaaatttgcttttttagaaagccaaataagaatagaataacttatggaaaggacttgtatataatattaaagaaattcggtgagcaatccataaaaagtttgtgtggactgtggaggtgaagagatggttggttcactgccatggaccgctaactatgcaagtttgcgcagacatattatgcctcctttataggttatttttggttagattgctagctgtggtaactttggtattacaatgctgtgctaagggttgtttgtgaagttgattgaggaatataagctggcaacatggaatttattgctgttaacacattcatatgggaatttctggagcaataacagaacacgtagtatccatccattcttgagatggttatgctggtagtgcatttgccaccaacactgcaatttgtggtgtccaagatgatcaaattgtactgtatatatgtagcgtgtaagtaaatttttcaattagcatgtgcaaacagaacattaaaaccaaaaaagaaggggaagagcatgtttgattctatctgcatctgaaatatgaaaattttaatctccttccggtttcttaggaattgggtaggaattgtttttttaattagggtgtatacatggcgtgttgttactacttactagcacttcatactgcctgattggagtagctggatcttaaatctgtgtcttaaacctgagaacaggataagccttcttatcaaacaggatcttgaaaacatctgcttgctcattgtttagtcatgagattccctctctgttgtttgtaaataacattcaaagatttgagttcctcggagagtttcagctaacggtaggcagtagctttaaacttaaagaagtctatcattaactcactgcacatgcagataggacttaccaatgctgctgatttttcatttggaaagatcaagttattggacaattaaagaacatatggattctgtatcaagggcaattctcatactggcagaaaagaaactatgcaacatctacttgcttataatcatttgacctaactcacctaatatggcaacagttagggggccccattacccattacttgtctacagctttttttgtatggcctagtttttatgaaatgctaaatacaagctacatatgatcagaatatatagattatttgaatcatggttagatctgtatagatctagcttgagtacgagtgagtctgtgaggaaattattaggggttcaccttttaacttttttcgatcagtttttgtgaagatacggtacctctgtaaacagtagtgttgatacatataggatgctggatggcataaacatgtttcactctatttcttttgctcgaatttgttagtcatcaccttggaactgtatttgcctttcctatatattttgatggtttcattttatagtgattgaataactgaaagtcttaaacacttaagagtcaacaagatgccaagtttaacttcaccataatactgcagtgaatgattaattttaagctttgatcgcaaacagaaagtagaatggtaaaaccaagagaaattgagtacttggatgaaatgctaagggtgggcaaaatattgaagttaaagaatgcgttcatagtgaaaatttacacaaggccagaaggcacaatgaagtttgtataaccacttatgtgactgcatatgtatggttcttaattaaaagaggtaaagtaataatatacaaatcggcaagtgtaggataaaagcatttcctttttgaaaaatgtttgcattaattgcttcagaatatggagggccaaaagccatttactctgttgaatcccccaaactgacctgcttggccaagaaatagtttacattgacatggcgtctatttgttactaaaaggtccactttttgaaaagaaaagaaaagaactgtgcaactttgtccattctgttagctgttccccaaagctgtgatctattgcttgaaaatccatctccggagaattagcttatcccattgatatatgtaatttctgtgaacaaaatttatgataaacacgtctgatgcaggttgcatggcggcgttggatgcggagcactacctacaggagattggagcacaggaagacaagactgattgactatatctgggacaagcaggtcgcagttcttcagctacttcatcgtcggtagcaagagctgcactctaaggcacaaagttgttaattgtggttgctcaaccaaagaaaaacagattggtatttgtctgtaggcctcagattcatgatacgttgttagaaaaatgattcatgtgagcactcagaaacttgtgttacaatttcatcaaattatgcacacttcatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0327300, RefSeq:Os06g0327300