Os06g0328800

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0328800| Description = Protein of unknown function DUF23 family protein| Version = NM_001064068.1 GI:115467867 GeneID:4340914| Length = 358...")
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Gene Name

Os06g0328800

Description

Protein of unknown function DUF23 family protein

Version

NM_001064068.1 GI:115467867 GeneID:4340914

Length

3589 bp

Definition

Oryza sativa Japonica Group Os06g0328800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13030886..13034474

Sequence Coding Region

13030992..13032211,13033712..13034057

Expression

GEO Profiles:Os06g0328800

Genome Context

<gbrowseImage1> name=NC_008399:13030886..13034474 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13030886..13034474 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcccgccggtgggaggagcaaggacggcggcggcggcggggcggcattgctcggcggcggcggcgtcacctgcttcgacgtcaagtccttcgtcgcctccctcgcgctcctcaccctcatcatggcgctctggcagctccacccctaccagcccctcgtcctcctccccgccgccctctcctcctccccatgccccctcctcccccgctcacccacctctggtattgccgtttccttcctctccaccgccgctgccaccaactcgactgacaccgccacggtcccaaccaccaccgccgccgcgagggtggcggcgacgacgaggccgaccctgcccgcgcggcagcgggagcgggacccaaacaagcgggagctccgtccgtacggcacggcggcggcgctgttcgtccagatgggcgcgtaccggggcggcccgcgcacgttcgccgtcgtcgggctggcatccaagccagcgcacgtcttcagcaacccttacttcaagtgcgagtggctgcccaacgctcccgccggcgcgccgccggtccggaccaaggcctacaagatgctcccggactggggctacggccgcgtctacaccgtcgtcgtcgtcaactgcaccttcccctccaaccccaacgccgacaacctcggcggtaagctcctcgtccacgcctactactccaccgcctcccgccgctacgagcgcttcgtcgccctcgaggaggcaccgggctcctacgacgacgcccgattccggccacccttcgcttacgactacctctactgcggctcatccctctacggcaacctaagctccgcccgcatgcgggagtggctcgcctaccacgcccgcttcttcgggccgaggtcccacttcgtcctccacgacgccggcggcgtgacaccggaggtgagggcggtgctggatccgtgggtcagcgccggccgcgtcaccgtccaggacatcagggcgcaggaggattacgatggctactactacaaccagttcctcgtcgtcaacgactgcctccaccgctaccggcacgccgcgaactggaccttcttcttcgacgtcgacgagtacatctacctccccgacggccgcgcgctggaggacgtgctcgcccagctccagccctacacgcagttcaccatcgagcagaaccccatgtccagcaagctctgcatcgatgatccgaccgaggactactcgagggaatggggctttgagaaacttgtcttccgcaattcaattaccggagtgaggcgtgatcggaaatatgcaatccaagcacggaatgcatactccactggtgtgcacatgtcgcaaaatgtgtatgggaggacaactcacaagacagaaagcttgataagatactaccactatcataattctatcaatgtcatgggggagccctgccggaaattcgtgccgaaacccgccaatggcagtaaggtaatgttcgaggggataccctacgtctacgatgataacatgaagcgcttggcaggggagatcagacgctttgagaagcagacgattggggatgtccatacatag</cdnaseq>

Protein Sequence

<aaseq>MKPAGGRSKDGGGGGAALLGGGGVTCFDVKSFVASLALLTLIMA LWQLHPYQPLVLLPAALSSSPCPLLPRSPTSGIAVSFLSTAAATNSTDTATVPTTTAA ARVAATTRPTLPARQRERDPNKRELRPYGTAAALFVQMGAYRGGPRTFAVVGLASKPA HVFSNPYFKCEWLPNAPAGAPPVRTKAYKMLPDWGYGRVYTVVVVNCTFPSNPNADNL GGKLLVHAYYSTASRRYERFVALEEAPGSYDDARFRPPFAYDYLYCGSSLYGNLSSAR MREWLAYHARFFGPRSHFVLHDAGGVTPEVRAVLDPWVSAGRVTVQDIRAQEDYDGYY YNQFLVVNDCLHRYRHAANWTFFFDVDEYIYLPDGRALEDVLAQLQPYTQFTIEQNPM SSKLCIDDPTEDYSREWGFEKLVFRNSITGVRRDRKYAIQARNAYSTGVHMSQNVYGR TTHKTESLIRYYHYHNSINVMGEPCRKFVPKPANGSKVMFEGIPYVYDDNMKRLAGEI RRFEKQTIGDVHT</aaseq>

Gene Sequence

<dnaseqindica>107..1326#2827..3172#acctttcctcctcctccccccattgcttcgtctcgcgccggatcgatccagctgccgccgcgttccgatcccctctgctctggcttgctgatagatcgatcgatcgatgaagcccgccggtgggaggagcaaggacggcggcggcggcggggcggcattgctcggcggcggcggcgtcacctgcttcgacgtcaagtccttcgtcgcctccctcgcgctcctcaccctcatcatggcgctctggcagctccacccctaccagcccctcgtcctcctccccgccgccctctcctcctccccatgccccctcctcccccgctcacccacctctggtattgccgtttccttcctctccaccgccgctgccaccaactcgactgacaccgccacggtcccaaccaccaccgccgccgcgagggtggcggcgacgacgaggccgaccctgcccgcgcggcagcgggagcgggacccaaacaagcgggagctccgtccgtacggcacggcggcggcgctgttcgtccagatgggcgcgtaccggggcggcccgcgcacgttcgccgtcgtcgggctggcatccaagccagcgcacgtcttcagcaacccttacttcaagtgcgagtggctgcccaacgctcccgccggcgcgccgccggtccggaccaaggcctacaagatgctcccggactggggctacggccgcgtctacaccgtcgtcgtcgtcaactgcaccttcccctccaaccccaacgccgacaacctcggcggtaagctcctcgtccacgcctactactccaccgcctcccgccgctacgagcgcttcgtcgccctcgaggaggcaccgggctcctacgacgacgcccgattccggccacccttcgcttacgactacctctactgcggctcatccctctacggcaacctaagctccgcccgcatgcgggagtggctcgcctaccacgcccgcttcttcgggccgaggtcccacttcgtcctccacgacgccggcggcgtgacaccggaggtgagggcggtgctggatccgtgggtcagcgccggccgcgtcaccgtccaggacatcagggcgcaggaggattacgatggctactactacaaccagttcctcgtcgtcaacgactgcctccaccgctaccggcacgccgcgaactggaccttcttcttcgacgtcgacgagtacatctacctccccgacggccgcgcgctggaggacgtgctcgcccagctccagccctacacgcagttcaccatcgagcagaaccccatgtccagcaagctctgcatcgatgatccgaccgaggactactcgaggtttgcatcttttttcttgcctaattttgcatttccctatgttaattgtaggtccaattgtttatgccatgctatttcagtgggaatccaactagattcgcgcaatagatttacaatactgcaattggcatatgaaatttgttctttccttgagggcttggtattctttgtagagataagtaagtgccacaaacgtagtagtacattgcttctccagtcattgtcaatttgttattaatcaatccgaacagcatatacttgaaacagctataagagaatagagtcaagagacaagtatttgtttatgtagtaggttgtttgggcagtgtgagtgtgtgactcccttggttcctgcatgattgaaggcactttggccctgcaccctggtccattgctgtaacatatttgttggatttcctgaattgaactaatgccgggaattggggttctgtcatttgctttgcatcaaggagattgtctctacatttcattcttacttcaaatgggcgttaccacttaccaataaggataattcatgcctagatggatgatatataagtagagtactatgaaaatgacaagtctatgtgaagaatatggatgttataaaccactagtattttgatgaaaaatagaaatccgttgaaaaacaatctggttggatctttggaaagagaaggggtgtggcacccagttgggaatacttctgttgagctggaagagcatgggttgatgagtgcatgactggtagggaactcacaataaacctgatgatcatttctgtgttattccaacggctacagttccattcttgctgtatagttttacaaccgctcaagcaaggcatcacaggtgtgagataatgctggtgggggagaaatgagaaacttcctcacaaccatagtgtttcccacttctgtaggcctatcattctgttgagaacagaaattgatttatttgttggtgatgagacaacaaaagctgctactcatccattttcccaagtatttactaaaatattttatttacttagtggcaataaaagcttctcaccttttttttttctttgttgaacctcagagtagtcttatgaacttctctgttatctgtcttagatagctgtgatttttctttcagacatagcatttttgtaacaaagggttgtaacccgataagaatgaacccaagtacccaaccagcaagggtaattgccatggttcttgttgatgtcaaaagtcaagacaataatgagtatgattgtgtgattttgtacttttgtagctcaatgtctttgtagtttacagtgacagtagtttcaattagaaactactgcctgtggctgtttgtcagttttgagttagcacatcatttcacgagcaaagaatctctgcatcagtgcatttaaggtagagggttatttgtgtctcctttggccttgattcttgatgtttattctgatggtgccattgctgacacatgttatatgtcattggtcttcagggaatggggctttgagaaacttgtcttccgcaattcaattaccggagtgaggcgtgatcggaaatatgcaatccaagcacggaatgcatactccactggtgtgcacatgtcgcaaaatgtgtatgggaggacaactcacaagacagaaagcttgataagatactaccactatcataattctatcaatgtcatgggggagccctgccggaaattcgtgccgaaacccgccaatggcagtaaggtaatgttcgaggggataccctacgtctacgatgataacatgaagcgcttggcaggggagatcagacgctttgagaagcagacgattggggatgtccatacatagcatctggatgcaaaactttgctggtacatatatgattttattctttcggacgccgtcggcggtgtccacctgttgccgtctgttctgtgcttcaagccgcaactctgagaatcagagggagaggatctaactccagtgtccaagcagcgctgtaaagttatggttctcttcagcattctcctcttcgtgcagggggcaacacgcctttgtggctcaatatcctttctttcctttgttcctttcccttcttctccctagtgttgtgctccaatctctttatagatttgtgcttattagactgacagtgtgccttcatcagattcttctcatctcttattgggggcattgtaaagtttgtctcattgtctgctaacttaatggaaggttggatcttatatagtactagtatatgtgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0328800, RefSeq:Os06g0328800