BGIOSGA033189

From RiceWiki
Revision as of 17:37, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA033189

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033189, complete gene.

LocusTag

OsI_34152

Ensembl Transcript ID

BGIOSGA033189-TA

Ensembl Protein ID

BGIOSGA033189-PA

Length

7917

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17613650..17621566

Sequence Coding Region

17613650..17613849,17615883..17615941,17618516..17618572,17618734..17618768,17619106..17619209
,17619359..17619434,17619534..17619592,17619672..17619737,17619829..17619912
,17619994..17620058,17620149..17620231,17620323..17620413,17620498..17620547
,17620657..17620797,17620886..17620947,17621030..17621043,17621310..17621566

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17613650..17621566 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17613650..17621566 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCGCCTCGAGCTCCTCGTCTCCGCCGTCGCCGCGCCTCCTCCTCCTCCTCCTGGTGGCGGTGGCGGCGACGCTGCTCCCCGAGGCGGCGGCGCTGGGCAACTTCACGGCGGAGTCCCGCGGCGCGCGGTGGCGGTCTCGCCGCGCGCGGCGCCGCGCCTTCGAGAACGGCCTCGGCCGCACGCCGCAGATGGGGTGGAATAGCTGGAACCACTTCTACTGCGGGATCAACGAGCAGATCATCAGGGAAACAGCTGATGCATTGGTCAACACTGGTCTGGCGAAATTGGGGTACCAGTATGTGAATATAGATGATTGCTGGGCAGAATATAGTAGGGATTCCCAGGGTAACTTTGTGCCAAATAGGCAGACGTTCCCCTCTGGTATCAAGGCACTGGCAGATTATGTGCATGCAAAAGGGCTGAAGCTTGGCATCTACAGCGATGCCGGGTCACAAACATGCAGTAACAAAATGCCAGGATCACTTGATCATGAAGAGCAAGATGTCAAGACCTTCGCGTCTTGGGGAGTTGATTATCTGAAGTATGACAACTGCAATGATGCTGGCAGGAGTGTCATGGAAAGATACACTAGAATGAGCAATGCCATGAAGACCTATGGAAAGAATATCTTCTTCTCACTCTGTGAATGGGGGAAAGAAAATCCTGCTACATGGGCAGGCCGCATGGGTAACAGCTGGAGAACAACTGGCGACATCGCCGACAACTGGGGCAGTATGACATCTCGTGCAGACGAAAATGACCAATGGGCTGCCTATGCTGGACCTGGTGGATGGAATGATCCTGACATGCTTGAAGTGGGAAATGGTGGGATGTCTGAAGCTGAGTACCGGTCACACTTCAGTATCTGGGCACTAGCAAAGGCTCCTCTTTTGATCGGATGCGATGTGCGCTCAATGAGCCAGCAGACGAAGAACATACTCAGCAACTCGGAGGTGATCGCTGTCAACCAAGATAGTCTAGGTGTCCAAGGAAAGAAAGTACAATCTGACAACGGATTGGAGGTTTGGGCCGGGCCACTCAGCAACAACAGGAAGGCTGTGGTGCTCTGGAACAGGCAGTCATACCAGGCAACCATCACTGCACATTGGTCGAACATCGGGCTCGCTGGATCGGTCGCGGTCACTGCTCGTGATCTATGGGCGCACTCTTCGTTCGCGGCTCAGGGACAGATATCAGCATCGGTGGCGCCTCATGACTGCAAGATGATTCAGGAAGAAGGATATCAAAATGAGACGACATCACCAACGGCCAACATCCTCAAGCAACACCGCCTCACCAACGGCCCCGTCGAGCTCCAGATGGACCCCATCACCACCTCCGATGACCACGACGACGACGACGAGCTCATCATCGATAGGAGGGGCTGGGTGAACTGGAGGACGCCGGAGAAGAGGGCGAAGAGGATGCTCGAGGAGGAACAGGAGGAGCTGGAGGACGAAGCCAGATGGAGGAATAAGCTTAAGGAGGAAGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MARASSSSSPPSPRLLLLLLVAVAATLLPEAAALGNFTAESRGARWRSRRARRRAFENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQSDNGLEVWAGPLSNNRKAVVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFAAQGQISASVAPHDCKMIQEEGYQNETTSPTANILKQHRLTNGPVELQMDPITTSDDHDDDDELIIDRRGWVNWRTPEKRAKRMLEEEQEELEDEARWRNKLKEEA</aaseq>

Gene Sequence

<dnaseqindica>1..200#2234..2292#4867..4923#5085..5119#5457..5560#5710..5785#5885..5943#6023..6088#6180..6263#6345..6409#6500..6582#6674..6764#6849..6898#7008..7148#7237..7298#7381..7394#7661..7917#ATGGCGCGCGCCTCGAGCTCCTCGTCTCCGCCGTCGCCGCGCCTCCTCCTCCTCCTCCTGGTGGCGGTGGCGGCGACGCTGCTCCCCGAGGCGGCGGCGCTGGGCAACTTCACGGCGGAGTCCCGCGGCGCGCGGTGGCGGTCTCGCCGCGCGCGGCGCCGCGCCTTCGAGAACGGCCTCGGCCGCACGCCGCAGATGGGGTACCGTCTCTCTCTCCCTCTCTCTTTATTTTTCTCATTCGCAACTCGTGACCGCTTATACTGTATAAATTTTGGTACATTTTTCTTTTGTGTTACCAAATTTTGGCAGACTTTTAGATATGTTCAGTTTGAAACGTTCCAAAATTTTGGTGATGGTGTTTATGCGAGATGAAACTCTGGGAGCTTCAAAATTTTGGTAGAGTAATAACACGTTTAGTGAACAGCAAGCAACCGATTATCACAATGGAAAATAAAAAAGAAACAGTAATCGCGTCATCTTCTAGTCGGATTTTTTTTGGGGGAGGAAACGGACATGTCTCTAGCTTGCAGTGGAAGCGAAAGCTTCTTCTGCTCTTCTCTGCAGTTTCTGAACTCTGAAACTCTGAACTTTAAGCTGCTTTTGTTTGTTCCTTTCTTCGATGCTTTCCTGCACGGCAAAAAAATTGACATCACACGCATGTGGAGTACTACGCTTCCGTTTTCCATTTTTTTTTTATCCTTTGTTTTTGTGCTCAATTTTGCGTTTGTTTATCGTGTTCGGCGATAGATTTTCTCTCTGTTTTTTTTATTCTGTCGATTTGAGACGTCAGAAGAGTAGCTCGCGCGCACGCGGACGCGGTGGGTGCATTTCTTTTTTCTCCGTTTGTCCAAAAGATTTCTGTTCTTTTCTGCATGGGAAAGAAGAAAGAAAAACTGGTGCTACTGTACAATGGACTATTGCCATGTTGGAGACCAATGTTGCTTTCTGTACGAGCAAATGTTTCGTCAGGTACAGGGCACTGTGAATTTTTTTTCACCCGGAAAAGTGGAAAACTTTCCTGAATTCAATGGAAAGCTTAAGAGTTCTGTCACTTGGGTTTTTTTTTTGTACATTTAGGTTCTGTCAGACTGTATGAAAGAAAAAAAATCAGACAATCCTGTTCTCTGTCAGGCTGCAAGAACATCCACAAGGTTAACCATCATCAGATTATCACTTTGAGAAAAATTGTAGTAAGGTTTAGACTCCACTGCATAAAAAATCTTCAGACAAGGGACAACCGAGAGAAAGCGAGCATGTCCACCAAAAACAGGCAGAAAAATTTCCTGCTTTTCATTTGGCTTCTGCTTCTTTTGACGGGCATATCTATGCTCTTTTCTTTTCTTTTCTTTTGCTTGTCCCTTTTAGCCTCTTTTCTTGTGCTGACATATTCAACTATGCTGCCTCTATTAAATTCTGTCACAATTGAACTGGTTTTTACCGTACATGTACTTCCATTTCATTGTTCTTTACGCATCAGGCAGAATTTCCGCACTTTCTTTTACCACCTACTCCTTCCCTCCAAAAAAGACAAATCTGGGTTTTCGTGTCCAACGTTTGACTGTCTATCTTATATAATTTTTTTTATAATTAGTATTTTTATTGTTGTTAGATGATAAAATATGATTAATACTTTATGCATTTATGCATGATTTGTCTTTTTAATTTTTTTATAATTTTTTAAAATAAGACGGACGGTCAAACGTTGGGCACGGAAATCCAGGGTTTGTCCTTTTTTTGGATAGACGGAGTACTCCCTCCATCCCTCCGTCCCACTTCGTCCTCGTCCAAATTCGTATTATTAGGATGTGTCATATCCTCTAACATATTAGAGAGTACTTCATATGTTCCAAAATATCAAAGTATTTTTATATTATTTAGCAAATATTGAAATTAACAAAAACAACTTTGATGTCCTTCATTAAGCGAGGGATGATTAGGGATGTGAGGACATTTTAGTAGAAAGAATTTCGAATGGGAGATAATCCATACAGCAAGTAGTACTCTAAATTATGCTAAAAATGCTTATATTTTTAACTAGGTGGAGTTCTTTAGAGTTCAGACTTCATAATATGTCGGTGTTGTAAACAATACTGCTAGTCTTTCAGATTCACGTGTGTAGGCATTAGCAGACAGTGGTACAAATGCATCAATGGTCGTGGTTTTGTCAAGTAATAAATTAATTAACAACTGCTGTGCGACTGACGCTGTCTCTCGGTGTGTGTGGCTGTGTTAGGTGGAATAGCTGGAACCACTTCTACTGCGGGATCAACGAGCAGATCATCAGGGAAACAGGTACACTTGCTTCTGCCACTAGTGCTCTCTTCTCAACTCAACTTATTTCTGCAACCCATGGCGTCACACTTTGATCTCTCCAGTACGCCACGTACCGTGTTTTGGTATTTTTCTCTATACACATTGCATTGGTTCCCAATGGACACGGATCCTCTACAGTATTGCTATTGTTGACATGTATACCTAGTCATATATATCAATGACATCTACAGCAGGTGTAGTATTGCAGACAATCCCCGTCGGTTTCCAATGTGCATCAGCACATCAGGAACCGAAAACTTGCAACCTCGTCAGAAATCTTTCCAATGAAGCTTAGATTATTTTTCTAGGAGATGACTTAATACGTTGATTTAGTAGTTTTTAGTTGGGAGGACACTGTTTTTGAAGTTCTTTTTTTTTTCAAGAAGTTTAGTAGTTCTAAACTATGCACTAATTTGGAACATCTTGGAAGCACAACACATAGTGGTGGGGTTCGGCGTAGTGTGGTGGGTGTGGTGTGTTTGGATGCATCAACGTCAGCAACAGCAGGCTACAAAAAACATTCAGAGAAAAAAAAAAGGTTGCCGTCGGTGATGCGACTTATCTGAAATTCCCCACGTACTTTTGTCATACCCTGCATCAAAACTTCCAAGAAATAATAAAAAAAGGATCATTCATCACAGGCTATGATTAAAGCAAGTTAACAAATGACACGTCATTTGCTACTAATCTAGTAGCCGACCTATACAATAGTTAGATACAGATACATACTAACACCACATAAGGCTTATTAAAGCTTGTGTTGCAACAGGTTACCGATCTGTAGCCCGTCTTTTTTCAAGTCCTGTCTCTTTTCTCTAATAACACAGCTCAAATCTTGGTAACTCCGATGGCTATCACTTCATTATACTTGCTCTTACAAGTTGGTAGTGTAATAAGAGTTGGGTAAAAGTAAACAGCCATGAATTGGGGCGGTGAGATCTCGAGTCACCCGAGAGACAACAATGCATCTGTTTTGGTATAGCTGCGAGCTGTACGGCCGCAGGGCGAGACCCTTGTCGGCCGGCACGGATTACTACAGCTAGGATTAACTGCAGGGATGAGCTTGAGCTTGCAGATTTACAGCTTGCAAGCAGCAGGTTTTGCATGGACCCAAGCTAGTACTAGCAATGCAAAGGACAGCGACCAGATTGGCTGCACCTGCACACTGCACACACACACTGCCATGCTCTCTATCTCTCCTGACCAAATCTTTATTCTTTGGGCACCAGACGAATCAGATCTGGTTCAGAGATGCCCTGCCCCTTTTAACTCTTCCACCATGCAACTTGCCTGGACGACTGAATTTTTAGTCGGCAATGTTCAGTAATCAGTCACGGCTTGCTTGCTTGCTTGGCCGATTTGTTTGTTGCTCCAGCATGCTAGGATTGCTTAAGAGTTTCAGGCAGAGCAGCTTCATGTGCTAGTGCAGTGTGATTAGGAGCTTTTTGCAGATTGCAGTAGATAGCATCCTCCCTTGGTTATCCAATCAATGGCTTTTTAGTGGATGGAAAGAGCAAAAGATTCCATGCATGGAGTAGATAGCTTTTGTTTTGTTTTGTTTAGAGGAGCAAGGCCACATGTGTTGCAAAACATTGTGGCAGAAATATGGAAATGAAAGGGAGAGTGAGAGGGTCCATGCTGAATAAGACCCTTTGGCCAGAATGTTCATAGGAGCTTTAATTACCATGTTGATAACGGATGATGAGGCCCCATAACCAAGCAATGCTGATCTCCAGAATGGGTGAAGACATTTTCACTGATTCTGATCTGCACAACTGGATTATGTTGAATTAAATCATTCATGTCGACAGCTTGTGGAGGGCAGATCTCTGAACAAATCTAGAGTAAATGTCTTAGATCAGATTTTTATGACTGAGTACACATTAATCATCTCATCAGTCATCCAGTCAATCTTGGTGGTCCAAACAAAATCAATTGACAATATTGTCACCACAGTCTAGTACTACTACAAAGTATGTGGTTGGTAATAGATGAAAGGAAGTCCATGGAAATGGGGCCCTACAATCTTGGGGTCAGCCATGGATTGGTACTGCCTAACTACCAAACTCTAAATAAGAGGATGGCAGCTGCAGCCTGCAGGCAGGCATGAAACCTGCTCCACTTGGACTCACTCCATTTACATGTAACCATAGTTAGTACTAGAACCACTCTCTAGCTACTTGTATAGTTGTATGTTCCAGCTTCCTAGTAGGTGGTTATGGACAAACACCCGTGATGATCTTAGTGTCTTATCAGAATAATCATGGTACTGATTTGGTCTGGTATCAAATTTCTGTTACAAACATTGTTCCTTAATATTGTCAATATTATGCACATAGTGTTTTTTTTTGCTGGGCCGGCCAAAGGAAGAGGCTGATCAAATATCATTAAGATTTGAAGGAGAATTTGCAAAGTTACAAGCATCGACAGGGAAGCCTGTCGAACCAGACGCCTTTTGAGATTTTTTGTACTACAGATTTAATAGAAGCTGTTTTTAATAATGTTGTGAGCAACTGAGAGTTAAGGCTGATGTAATTGTGTTCCTTTCTTCAGCTGATGCATTGGTCAACACTGGTCTGGCGAAATTGGGGTACCAGTATGTGAATATAGGTATGGGCTTTTATCTGATAGAAACTATGAACAGTATTTCATATGATACACTAGAGTATGGACACAAACATTGTTGATATGTTAGCAAAAGTTAATTCAATTATTTTGTGATAGAACAGCTAGTAACTCATGTCTGTAATGTTTTCCATCTCTTCTTTCAGATGATTGCTGGGCAGAATATAGTAGGGATTCCCAGGTAAAGAGACAAAAATATTCTCCATAAAGCAATGCTATCCACCGCCATAATTTTCAGCACAATTTTAGGATACAAATTTGAGAACCTTGTCTAGTTTGTTGATGAGCCTGAGAAATTTTAGACTGGAAACAATCATTAACAATTACAATACACATTAATAAGAAAACGTATGTACTTTCTATCAGTTTAATGTGTCATAACTAGAAATTTTATATGTGAAAAATTCTGCATGGGGGGAGAATGAGCAATTTTAAAAGATCAATGCTTTAAAATTGTGTAGACCAAGCTATTGCTGTCAGTTTTGACAAGTTGTACTGCTCTTTTTTTCGCTTCTCAGGGTAACTTTGTGCCAAATAGGCAGACGTTCCCCTCTGGTATCAAGGCACTGGCAGATTATGTGCATGCAAAAGGGCTGAAGCTTGGCATCTACAGCGATGCCGGGTATGCTAGCTTTCAGATTTATCATAATGACAAACTACTTTGTACTCATCCAGAAGTAACTTATGTCATCATTAGCCTAGATGAACTAAGAATTTTATCGAATATAAACTATCAACAAATCTGAAACTAATAGCAAGACTGTATTTCAGGTCACAAACATGCAGTAACAAAATGCCAGGATCACTTGATCATGAAGAGCAAGATGTCAAGACCTTCGCGTCTTGGGTAAACCTCGACTCTTTTACCTGTCTGGTTATACCCAATCAACATTAAACACTGAAACTATTATTCTGGTGTTCTTAATTCTTGACCTCTATGTTCCAGGGAGTTGATTATCTGAAGTATGACAACTGCAATGATGCTGGCAGGAGTGTCATGGAAAGGTAAGGAGACAAAACATCTCAAACTGTCAGCTTTATGCATCAGATTGCTGATGAGCAACTGTTTTCATGTTTAATGCAGATACACTAGAATGAGCAATGCCATGAAGACCTATGGAAAGAATATCTTCTTCTCACTCTGTGAATGGTGAGTTTACTCTCTGTAACATTTAGGGCTAGGTCGAAGGAACATGAAGCATTGCTGATTCACTCCACTGTGTTTTTTTTTTTCTGTATAGGGGGAAAGAAAATCCTGCTACATGGGCAGGCCGCATGGGTAACAGCTGGAGAACAACTGGCGACATCGCCGACAACTGGGGCAGGTTCTACTCATCCTCTCTTTAACCCTGTTTACATAGTTCTTGAGTTTTTCAGTACTGATCGTAATTGCCCTGTTATTTCAGTATGACATCTCGTGCAGACGAAAATGACCAATGGGCTGCCTATGCTGGACCTGGTGGATGGAATGGTAAGAACTTGAGATGTATCTGTTCCTAGGTTGCTTAACCATTTGAGAGCTTCAAAATGATCAACATATGTTTCTGCTGTGCAATATCAGATCCTGACATGCTTGAAGTGGGAAATGGTGGGATGTCTGAAGCTGAGTACCGGTCACACTTCAGTATCTGGGCACTAGCAAAGGTACCATAGCATGTTCTATGTACTAATAATTTTGCTGCAATGTTGAACTTCTTTGCATTTCCTCACTGCAAGTTTTGCTTGAATTGTTCAGGCTCCTCTTTTGATCGGATGCGATGTGCGCTCAATGAGCCAGCAGACGAAGAACATACTCAGCAACTCGGAGGTGATCGCTGTCAACCAAGGCAAGCCTTCTCAGTTTCACATGCTTAGATTTAGCCATACCTCTTGGATATTTCACCATACTCATAATGTAACTCTCTGAACAGATAGTCTAGGTGTCCAAGGAAAGAAAGTACAATCTGACAACGGATTGGAGGTATCCCTTCAATGGCTTCCAAATTTGCAGTTTCTCATTGTCCCATAAGCCTTGGCATGATCATGACTAACTCTGAAGCTGACAATACTTTGTGTAAATTTGTCGGTAGGTTTGGGCCGGGCCACTCAGCAACAACAGGAAGGCTGTGGTGCTCTGGAACAGGCAGTCATACCAGGCAACCATCACTGCACATTGGTCGAACATCGGGCTCGCTGGATCGGTCGCGGTCACTGCTCGTGATCTATGGGCGGTAAAGCCTTTGCTTTCTTCAGAGCTCAAAGTAGAACATCTTCTCTTCAGAATTCAGAGTTCATAACAAATTTCTGTCAATTGTGCAGCACTCTTCGTTCGCGGCTCAGGGACAGATATCAGCATCGGTGGCGCCTCATGACTGCAAGATGTATGTCTTGACACCAAACTAGTCAGCAAAGAAAAGCAGCACAGGTTAGTACGTGTCCGGCGAATACAGCTAAATTGATCAGGATTCAGGAAGAAGGTTTGCAATTTGCAAGGATTGGTAGAGCTGGAAATGGGATGCCATTTGGTTATGTATGTAGAAATAAGCTGTAAGCCTGTAAGCGTATATGTAATCAGCCGTCAAATGCTGGCGAGTGTATTTCTGAAGTTTGCAACGAAAGTTGCAGCAATAAAAATACAAAAAGAAGGCTTTCCTGCCACTATATAAGATATGAACATATGAATTTTTTGTATCGCCTGAAGACCTGATTATACGGCTAAACACTTGAGACACGGCAACTGCAGGATATCAAAATGAGACGACATCACCAACGGCCAACATCCTCAAGCAACACCGCCTCACCAACGGCCCCGTCGAGCTCCAGATGGACCCCATCACCACCTCCGATGACCACGACGACGACGACGAGCTCATCATCGATAGGAGGGGCTGGGTGAACTGGAGGACGCCGGAGAAGAGGGCGAAGAGGATGCTCGAGGAGGAACAGGAGGAGCTGGAGGACGAAGCCAGATGGAGGAATAAGCTTAAGGAGGAAGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033189