BGIOSGA033207

From RiceWiki
Revision as of 17:37, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA033207

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033207, complete gene.

LocusTag

OsI_34185

Ensembl Transcript ID

BGIOSGA033207-TA

Ensembl Protein ID

BGIOSGA033207-PA

Length

7142

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17882178..17889319

Sequence Coding Region

17882178..17882680,17883632..17883683,17884364..17884380,17884603..17884645,17886664..17886747
,17886840..17887085,17888414..17888782,17889221..17889319

Genome Context

<gbrowseImage1> name=IndicaChromosome10:17882178..17889319 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:17882178..17889319 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCCGCGCCGCTTCCCGCGCTGTTGGCGCCCTTCGCTCGGACGGCTCGATCCAAGGGCGAGGAGGCCGCGCGGGGGGCAGTGGCGCCGAGGACGCACGCCACGTGTTCGACGAATTGCTCCGCCGTGGCAGGGGCGCCTCGATCTACGGCTTGAACCGCGCCCTCGCCGACGTCGCGCGTGACAGCCCCGCGGCCGCCGTGTCCCGCTACAACCGCATGGCCCGAGCCGGCGCCGACGAGGTAACTCCCGACTTGTGCACCTACGGCATTCTCATCGGTTGCTGCTGCCGCGCGGGCCGCTTGGACCTCGGTTTCGCGGCCTTGGGCAATGTCATTAAGAAGGGATTTAGAGTGGACGCCATCGCCTTCACTCCTCTGCTCAAGGGCCTCTGTGCCGACAAGAGGACGAGCGACGCAATGGACATAGTGCTCCGCAGAATGACCGAGCTCGGCTGCATACCAAATGTCTTCTCCTACAATATTCTTCTCAAGGGGCTTCATTGCAAAGAAGGGAGGGTTATAGAATCTGAAAAACTCTTTGAGCTGATGGGAACTGTTGCAGAGAGTCCTATTAGAGGAGGGATCTTCTCTGTATGTGTAAATAGCGAGGTGCAGACAGGTGCTTGCGGTCAGGTTAAAGAAGTTGGCAAAAATGCTTCTGAAGAAAGGTTAATTGTTGTTTCATCTCAGGAGATTCCAGATGATCCAGTGTCTCCAACAATTGAGGCGCTTATTTTGCTCCATAGTAAAGTAAGTACACTTGCTGAGAACCACCAGTTGACAACACGGCTTGTTGTACCATCAAACAAAGTTGGTTGTATTCTTGGGGAAGGTGGAAAGGTAATTACTGAAATGAGAAGACGGACTGGGGCTGAAATCCGAGTCTACTCAAAAGCAGATAAACCTAAGTACCTGTCTTTTGATGAGGAGCTTGTGCAGGCCTCCGTTTTTAGTTTCACGCTGGGCCTTCAGAATCTCAGGACCGGCCCTGCTCATGATCCTTACACCGTGTATCCTGTAGAGTACTTCTCTAAAAGAGAGTACCCTAGTGGAAGTAGCAAAGTTGCACCATCTGCTTCATACGAAAGATATGCAGCAACTACTCGCTTGCCTAATAGAGAACTGCCCTCATCTATTAGTCCTGGTGCCGATTATATGTCCTGCCGTTCTTATCTTGACCAAGTACCTACTGATAGGTACTCTAATAGGGTTACACTACAATTAGGCCTCTTGAGAGCCGGGAATAGTAATGTGCAACAATTAGGAATCACCAGAGCTGGAAATTCCAATGCTTATGATTATACTGAGGCTGCGGAGCTGATCCATGGACGTGAGGATTACCGAAGACTGTCAGGTCTCACTGGGTATGGCTTACGCAGACTGAATTTTTACAGGACACAAACATGA</cdnaseq>

Protein Sequence

<aaseq>MARRAASRAVGALRSDGSIQGRGGRAGGSGAEDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLHCKEGRVIESEKLFELMGTVAESPIRGGIFSVCVNSEVQTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQASVFSFTLGLQNLRTGPAHDPYTVYPVEYFSKREYPSGSSKVAPSASYERYAATTRLPNRELPSSISPGADYMSCRSYLDQVPTDRYSNRVTLQLGLLRAGNSNVQQLGITRAGNSNAYDYTEAAELIHGREDYRRLSGLTGYGLRRLNFYRTQT</aaseq>

Gene Sequence

<dnaseqindica>1..503#1455..1506#2187..2203#2426..2468#4487..4570#4663..4908#6237..6605#7044..7142#ATGGCGCGCCGCGCCGCTTCCCGCGCTGTTGGCGCCCTTCGCTCGGACGGCTCGATCCAAGGGCGAGGAGGCCGCGCGGGGGGCAGTGGCGCCGAGGACGCACGCCACGTGTTCGACGAATTGCTCCGCCGTGGCAGGGGCGCCTCGATCTACGGCTTGAACCGCGCCCTCGCCGACGTCGCGCGTGACAGCCCCGCGGCCGCCGTGTCCCGCTACAACCGCATGGCCCGAGCCGGCGCCGACGAGGTAACTCCCGACTTGTGCACCTACGGCATTCTCATCGGTTGCTGCTGCCGCGCGGGCCGCTTGGACCTCGGTTTCGCGGCCTTGGGCAATGTCATTAAGAAGGGATTTAGAGTGGACGCCATCGCCTTCACTCCTCTGCTCAAGGGCCTCTGTGCCGACAAGAGGACGAGCGACGCAATGGACATAGTGCTCCGCAGAATGACCGAGCTCGGCTGCATACCAAATGTCTTCTCCTACAATATTCTTCTCAAGGGGCTGTGTGATGAGAACAGAAGCCAAGAAGCTCTCGAGCTGCTGCACATGATGGCTGATGATCGAGGAGGAGGTAGCCCACCTGATGTGGTGTCGTATACCACTGTCATCAATGGCTTCTTCAAAGAGGGGGATTCAGACAAAGCTTACAGTACATACCATGAAATGCTGGACCGGGGGATTTTACCTGATGTTGTGACCTACAACTCTATTATTGCTGCGTTATGCAAGGCTCAAGCTATGGACAAAGCCATGGAGGTACTTAACACCATGGTTAAGAATGGTGTCATGCCTGATTGCATGACATATAATAGTATTCTGCATGGATATTGCTCTTCAGGGCAGCCGAAAGAGGCTATTGGATTTCTCAAAAAGATGCGCAGTGATGGTGTCGAACCAGATGTTGTTACTTATAGCTTGCTCATGGATTATCTTTGCAAGAACGGAAGATGCATGGAAGCTAGAAAGATTTTCGATTCTATGACCAAGAGGGGCCTAAAGCCTGAAATTACTACCTATGGTACCCTGCTTCAGGGGTATGCTACCAAAGGAGCCCTTGTTGAGATGCATGGTCTCTTGGATTTGATGGTACGAAACGGTATCCACCCTGATCATTATGTTTTCAGCATTCTAATATGTGCATACGCTAAACAAGGGAAAGTAGATCAGGCAATGCTTGTGTTCAGCAAAATGAGGCAGCAAGGATTGAATCCGAATGCAGTGACGTATGGAGCAGTTATAGGCATACTTTGCAAGTCAGGCAGAGTAGAAGATGCTATGCTTTATTTTGAGCAGATGATCGATGAAGGACTAAGCCCTGGCAACATTGTTTATAACTCCCTAATTCATGGTTTGTGCACCTGTAACAAATGGGAGAGGGCTGAAGAGTTAATTCTTGAAATGTTGGATCGAGGCATCTGTCTGAACACTATTTTCTTTAATTCAATAATTGACAGTCATTGCAAAGAAGGGAGGGTTATAGAATCTGAAAAACTCTTTGAGCTGATGGTACGTATTGGTGTGAAGCCCAATGTCATTACCTACAATACTCTTATCAATGGATATTGCTTGGCAGGTAAGATGGATGAAGCAATGAAGTTACTTTCTGGCATGGTCTCAGTTGGGTTGAAACCTAATACTGTTACTTATAGCACTTTGATTAATGGCTACTGCAAAATTAGTAGGATGGAAGACGCGTTAGTTCTTTTTAAGGAGATGGAGAGCAGTGGTGTTAGTCCTGATATTATTACGTATAACATAATTCTGCAAGGTTTATTTCAAACCAGAAGAACTGCTGCTGCAAAAGAACTCTATGTCGGGATTACCAAAAGTGGAACGCAGATTGAACTTAGCACATACAACATAATCCTTCATGGACTTTGCAAAAACAAACTCACTGATGATGCACTTCAGATGTTTCAGAACCTATGTTTGATGGATTTGAAGCTTGAGGCTAGGACTTTCAACATTATGATTGATGCATTGCTTAAAGTTGGCAGAAATGATGAAGCCAAGGATTTGTTTGTTGCTTTCTCGTCTAACGGTTTAGTGCCGAATTATTGGACGTACAGGTTGATGGCTGAAAATATTATAGGACAGGGGTTGCTAGAAGAATTGGATCAACTCTTTCTTTCAATGGAGGACAATGGCTGTACTGTTGACTCTGGCATGCTAAATTTCATTGTTAGGGAACTGTTGCAGAGAGGTGAGATAACCAGGGCTGGCACTTACCTTTCCATGATTGATGAGAAGCACTTTTCCCTCGAAGCATCCACTGCTTCCTTGTTTATAGATCTTTTGTCTGGGGGAAAATATCAAGAATATTATAGGTTTCTCCCTGAAAAATACAAGTCCTTTATAGAATCTTTGAGCTGCTGAAGCATTTTGCAGCTTTGAAATTCTGTGTTGGAATTCTTTTCTCCTACAGTCCTATTAGAGGAGGGATCTTCTCTGTATGTGTAAATAGCGAGGTATGTATGCCACCTCTCCGAATTATTTTTACTGTGGTTCCTAGACTGTAAACAAGCAATTATGTTATGCTGTTGATGCCAGAAAAAACATAAAAGTTTGTCGTTATCTCTACTAACGGATCATAAAGGGATTTGTGACTGGAGTTTCAAACTTAATGTGTCTAGGCAGTAATTTTGACATTAGATCCAAAACAATTTATAGGGTTTCATTAAATTTCATCTATGTGTACTGTTTAGGTGTTGAATAGTTTGACTTGTTTTTTAACTGAACAAAAGATATGTCTGAAGCTTTGTTCTTTACCAAATGCAGTACTGATCATCACAATATATTTTTTATGGAACAAGATTGGATTGTATAGAATGGTTTCTGATCTGATTATCTTATCTCAACGTATTATTATGCACATGTACTAATCATGAAATATCTGATGGAATGATGTTTCTATTTACCTGTGTGAGGCAGCAAGGAGTGAGATGGATAACACCACATACTCCCTCTGTCCCAGAATATAAGAAGTTTTAGAGTTGGACACGATTATTAAGAAAGTAGGTAGAAGTGAGTAGTGGAGGGTTGTGATTGCATGAGTAGTGGAGGTAGGTGGGAAAAGTGAATGGTGGAGGGTTGTGATTGGTTGGGAAGAGAATGTTGGTAGAGAAGTTGTTATATTTTGGGGAGTACATTATTATTCTAGAACAATACTGTTGTGCTCAAGAAGCGTTCCAAAGATGTTTCACAACCTGTGCTCGATGGGTTTTGAGCTTAATCCTGGGACATTCAGTATCATGATCTGTCTCATTCTTAAACATGGAATAAAGGATGACAGCATGATTTCTTTGTCTCTATAATCTTTTGGCTACCCACAGATAATAGCTGTAAATCTATACTACTTTAAAAGGAGTAGTGGTGGTGGTGAGTGGTGAATCTGCCACCACCCCACCACCAACTCTCAAAATTCTGACATGTGGGATCACTGTCAATCCCTTCTCCAAGACATGTGGGATCACTGTCAATCCCTTCTCCAAACCAATTGTATGATAGAACAGTGGAAATCACGGACAGACCATGGAGCTCTCAACCATAATCATCCTTGCGAGTTAATAACAAATGGAGCGTAAACTTGGCAAGCAAAAAACTCAAATTAATTCTAAAATTAAGCTCTAGGATTCAAAATAGATTTCCTCTCTGCATTGTGCTGTTATGATTTTTAATTCCGTAACAACGCAAATGCATTTTGCTAGTCTTATAAAGAAGGGTTAATGCAAATATTCTGATTAAATGATTGTATCTATGAAGTTTGAATGCTAGTGGAAGCTCCTTTGACCATGTTTTGTTGTGCGAGCATTTAAGAGAGTGAAGAGAATGCTTCTTTGGTGCTGTTCTGGTATGGAAGGATCCACAGATAAAATTCAGGTTCTACTGCTTCTCTGCTTGTAATTTTCATGAAGCTGCAGTGAATACCTTGTTGACCACTTGATCTGTTGCTTTGAAGGAGAATATAGTAGTGGCCAAGGTTGGTGACGGTGATGGTGGCATGTGATCCCCCAGATCTTCAGTGACCCAGAGAGGAGGGGACGGCGCGTGGTGAGCTACAAGGCATACTCAGTGGAGGGCAAGATCAAGGCCTCCCGTCCGTAGGGGACTCCGCTGCATCAAGGCCAACTGCTCCGAACTGATCAATTTCTGGTACGGATCACTTCTCCTTTCCTTTTTTTTTTCACCTTAAGCACTCTCTTGATTCTTCGCTGCTACCTCCCTTAATTTCTTTCAATATATTGTGGCACTTGATCATGGCGGAGACCCACCTTCCAGTGTGAATGGATTTTGTCAAAGAACTAAATTTATTCCATTAGCTTATTTTCCGATTACATGGAAGACATTCTTTTCTGGAATAAATACAGAACTAAATCCTGTTTCCTGAATAAAAGTTGTTAGTGTGTGGCATGGTGCATTTCCGCGCTTCTAAATTTTATAAAACCTGTTCATTCAATTTGAACCTGCATCCAATCCAATATTTTAGGTGCAGACAGGTGCTTGCGGTCAGGTTAAAGAAGTTGGCAAAAATGCTTCTGAAGAAAGGTTAATTGTTGTTTCATCTCAGGAGGTAATATGCAGATGATTATTCCAATTGGCATTGCCTTGCCATTTTTATCACGAGTCTTTACAATTTTATATCCTCCTACATATTCTTTCCAGATTCCAGATGATCCAGTGTCTCCAACAATTGAGGCGCTTATTTTGCTCCATAGTAAAGTAAGTACACTTGCTGAGAACCACCAGTTGACAACACGGCTTGTTGTACCATCAAACAAAGTTGGTTGTATTCTTGGGGAAGGTGGAAAGGTAATTACTGAAATGAGAAGACGGACTGGGGCTGAAATCCGAGTCTACTCAAAAGCAGATAAACCTAAGTACCTGTCTTTTGATGAGGAGCTTGTGCAGGTAATTTATTTGGCCATACCTACACCAGAGATCCATATATTACTTTTATAACTGCAGTTTTTACTTGTTAACATTTCATTGTGCTTTTACATTTGTTCCAAGCTTTCAGGTTGCTGGGCTTCCAGCTATTGAAAGAGGAGCCCTGACAGAGATTGCTTCGAGGCTTTGAACTAGGACACTCAGAGATGGAAGTTCTTCCAATAATCCGACACCTTTTGCCCCTGTTGATGGTCCTCCTGTTGATATCTTGCCTAACAAGGAATTCATGCTATATGGACGATCTGCTAATAGTCCCCCATATGGAGGGCCTGCTAATGATCCACCATATGGAAGACCTGCCATTGATCCACCATATGGAAGACCAATATCCACAATATGGAAGACCTGCCAATGATCCACCATATAGAAGACCTGTCAATGATACATCATATTGAGGGTTGAACAATGATGGGCCTCGTGATCAGGCCCGGTCCTGAGGGGGGTCGAATGGGGCGATCGCTCCGGGCCCCCCGATTCCCAGGGCCCCCACCTATCTGTGCAACGAGTAGTAGCGATCTTCCAGCGCGCAACGTGAGGCGATGTTTCTCCGTGATTTCGCCGGCCTGCAACTGCGAGATCGCGAGTATAACGATCAGCCGATCGATCTCATCTGCCGACTGCCATGCTGATGCCACACGCAAGCGCAGCATATCAGCCTTATCTTGGTTGATCGGCATGCTGGACGAGCACATCTGTTGTCGCATCAACTGCTGACTGCTATATATGTGCTGGTGCTGAATCGATCGATTGTCGTCACGGAAGTGAAGAACAACCACGGCACTGCTGCCTGCTGGGCTCTAGCCGCCATCAGTAAGTACGCTATACTGCCTATCTAGATCTAGATCGAGATTACATAGTGGAATTATCTGTTTATAACAAAATTACAAGGTATCAATTGATAATTTAAGGTTATAACCGTACAAACTTCAGTGATTTGCTGGTTTCACATTGGTTAGATTTGTTTCAACTAATTTGGTACTTCTGTAGCCTTGTAATTTACGAATCTAGTATTAATATTTTCTTAAGTATTAGCCTGTTCCTTGATATTATGCTGTTGAGAAAGTATGCAATAGATAACAAAAACAAGTAGGTGTGTTGAGGATGCTCAAGAGTAATACAGGCACTTCAATAATTCTGATATTATCAGGACATCATCAATAATTCTGCGCCTACAAATCTTCAAAGAAAATTTTAATATAATGCGTATGATTTTTTAAATACGAATATTGATTGCTATTTAAAGATATTTATATTATATGGTAATTATTATTTGAAGGTTTATAATAAAGGCCTCCGTTTTTAGTTTCACGCTGGGCCTTCAGAATCTCAGGACCGGCCCTGCTCATGATCCTTACACCGTGTATCCTGTAGAGTACTTCTCTAAAAGAGAGTACCCTAGTGGAAGTAGCAAAGTTGCACCATCTGCTTCATACGAAAGATATGCAGCAACTACTCGCTTGCCTAATAGAGAACTGCCCTCATCTATTAGTCCTGGTGCCGATTATATGTCCTGCCGTTCTTATCTTGACCAAGTACCTACTGATAGGTACTCTAATAGGGTTACACTACAATTAGGCCTCTTGAGAGCCGGGAATAGTAATGTGCAACAATTAGGAATCACCAGAGCTGGAAATTCCAATGCTTATGATTATACTGAGGTACATTTCCAATGCGTTAGCTTGCCTCTTCTTTGCAAATGGCCCTCGCCTGATATGTTTCCATTAGAAACATGAAACCATATATTTGACTGTTGCATTATGTCTATTTTCTTCCATGATGGTTCAGACGTCTGAAAAAAGGACAAAAATATTCTAGAATATGTCATGGTGATCCAAATATATCCTTCTGTCTTGTGCCCACTCTAATATCTATCGTTGGTAACACTATTCAATTGTTACCATGTTGTTGCAAACCCTAGATTCAGTTATTCAGCTGTTCTCTGCTGCTGTTGCTTACCAGTTTTCTTAGTTGGGTGTTGATCTTTTCTCATTTTTTATTTCCTTGTTTCCTGGTTCACCTGCTGCCTCTCTGATGCATCTGAATGTATATTTTTGTTCTCTTCAGTGCTTAATAGATTTAAATTTCATTCTTTTCAGGCTGCGGAGCTGATCCATGGACGTGAGGATTACCGAAGACTGTCAGGTCTCACTGGGTATGGCTTACGCAGACTGAATTTTTACAGGACACAAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033207