Os09g0505800

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0505800| Description = Similar to Uridine kinase-like protein| Version = NM_001070140.1 GI:115480022 GeneID:4347509| Length = 5382 bp| Def...")
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Gene Name

Os09g0505800

Description

Similar to Uridine kinase-like protein

Version

NM_001070140.1 GI:115480022 GeneID:4347509

Length

5382 bp

Definition

Oryza sativa Japonica Group Os09g0505800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20223766..20229147

Sequence Coding Region

20223837..20224071,20224161..20224252,20225148..20225217,20225325..20225443,20225734..20225830
,20225937..20226016,20226151..20226345,20226435..20226518,20226639..20226699
,20227390..20227450,20227870..20227963,20228065..20228137,20228542..20228624
,20228716..20228862

Expression

GEO Profiles:Os09g0505800

Genome Context

<gbrowseImage1> name=NC_008402:20223766..20229147 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20223766..20229147 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggagaaggcggtggacgacgtcatggactcggcggtgggggcgcacttcagcggactccgcctcgaggcgctccgcctctcctccccctccgccccgtcctccccttcctccgccaaggcggccgcggcggcggccgcccactccaacggcgccgtctacgccaacggcgtcgccgccgacgccgcggagcttgtgtcgccatccgcgctcaggcagcccttcgtcatcggggtttcgggtgggacggcgtcggggaagacgacggtgtgcgacatgatcatccagcagctgcacgaccaccgtgtcgtgctcgtcaaccaggattccttctaccgtgggttaactgctgaagaatctgcacatgcccaagattacaactttgatcaccctgatgcatttgacacagagcagcttctggaatgcatggggcagctaaaacgggcacagcctgtaaatgttcctatatatgattttaagaatcaccgacggtcctctgaaagctttagaaaggtcaatgcatcagatgtcattatattagagggcattttagtcttccatgatcaaagagttcgcaatctgatggacatgaaaatttttgtggacacagatgctgatattaggctagctcgacgaataaggcgtgatacagttgaaagaggtagagatgttagctcggtgcttgagcagtatggcaggtttgtgaagccagcatttgatgattttgttctcccttcgaaaaaatatgccgacgtgatcataccacgaggaggtgataatcatgtggcaattgacctgattgttcaacatattcgtactaagcttggtcagcatgacttgtgcaaaatctatccacatgtttatgtggttcaaacaacattccagatccgaggaatgcatactctgattcgtgacagggacatcactacacctgactttgtcttttattcagatcggttgatccgtttggtagttgagcacggactggggcatttgccatttacagaaaagcagattattactccaacagggtccatttatatgggagttgaattttgcaagaagctctgtggagtgtctattgtccgaagtggtgaaagtatggagaatgcattgcgtgcttgttgtaaaggaataaaaattggcaagattctaatacatcgtgttggagacaatggacagcaacttatataccataaactgcccatggatattgctgaacggcatgttcttcttttggatccagtgcttggtacaggtaactcagcaaatcaagctattgagcttctgataagaaaaggtgttccagaggagcgaatcatatttctcaatcttatctcggctcctgagggaattcagtgcgtctgcaagcgatttccgaggctgaagattgtaacctccgagatcgacaccgggttgagcgaggaatacagggtaatcccagggttgggagagtacggtgaccgctacttcggcacagataattga</cdnaseq>

Protein Sequence

<aaseq>MPEKAVDDVMDSAVGAHFSGLRLEALRLSSPSAPSSPSSAKAAA AAAAHSNGAVYANGVAADAAELVSPSALRQPFVIGVSGGTASGKTTVCDMIIQQLHDH RVVLVNQDSFYRGLTAEESAHAQDYNFDHPDAFDTEQLLECMGQLKRAQPVNVPIYDF KNHRRSSESFRKVNASDVIILEGILVFHDQRVRNLMDMKIFVDTDADIRLARRIRRDT VERGRDVSSVLEQYGRFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKL GQHDLCKIYPHVYVVQTTFQIRGMHTLIRDRDITTPDFVFYSDRLIRLVVEHGLGHLP FTEKQIITPTGSIYMGVEFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRVGD NGQQLIYHKLPMDIAERHVLLLDPVLGTGNSANQAIELLIRKGVPEERIIFLNLISAP EGIQCVCKRFPRLKIVTSEIDTGLSEEYRVIPGLGEYGDRYFGTDN</aaseq>

Gene Sequence

<dnaseqindica>72..306#396..487#1383..1452#1560..1678#1969..2065#2172..2251#2386..2580#2670..2753#2874..2934#3625..3685#4105..4198#4300..4372#4777..4859#4951..5097#gagcgagaagatcccgaccaaaacccgcgaaggcagcgagatcgatcggcggcggcggcggcggggagatcatgccggagaaggcggtggacgacgtcatggactcggcggtgggggcgcacttcagcggactccgcctcgaggcgctccgcctctcctccccctccgccccgtcctccccttcctccgccaaggcggccgcggcggcggccgcccactccaacggcgccgtctacgccaacggcgtcgccgccgacgccgcggagcttgtgtcgccatccgcgctcaggcagcccttcgtcatcggtagtaactaattcgagcccttcctcgtcggcattgttttttgcttggtttagcctctgtttgcgaggatttctcttggatttttcaaggggtttcgggtgggacggcgtcggggaagacgacggtgtgcgacatgatcatccagcagctgcacgaccaccgtgtcgtgctcgtcaaccaggtgtgtgtgccatcattttcttctatagtttcacattgatctgtgttactagcttagctgaactctggggttgcataatgcggcatatgtgctaaatcatggactgatagtgatcaggattaggaaattttcgagtaggtttgatgtgtcctttaaccagcttactaacgtgcttctgccatttccctactactttttggaaaagtaatctgtttagatctattctgctagatgagtgtctctatgcattcatctttcttgcaattcattgcacctaatgctcatattacagctgtgaaactaagcaatgaaactgttcacaaccttatattttatatgaatggaaaacatggcatgaatggacacgggtaacttgatgtctgatcagtttttctgggatatgcctgaatgttacctcaagttgtgctacctctagcatgaatgcatttaggtcacttacggtaactggatgtttgggggcatccattcaggcaccacatgatctagaggatgggaatatcagtttgtgataaatgcaactcaaaatatttatagttagcagaaatgtggcacaaccatgttttccatggaatagcaaaacacagctaaatgtgtattgtccacagctccgtcctggctccaccccctttgatgttcttctcatgtttataaatccagaaaccgttagtccaatttatttgggaaattatcttcttggtgtctgtgtgacaacccatatgccacattggttagttgatctttcaaccaatagtccacctgtaaatgatgcgtcattagttacttcagtttttttcctgacaagtcttagtgtcgtctcgctccaccagaaatgctttgaagagccagtaaatttcatttgggttttaacttgcaggattccttctaccgtgggttaactgctgaagaatctgcacatgcccaagattacaactttgatcaccctggtacttgacttgtcgtttggatggaattacactccctgttttagtgatcagagcctgagttggcattcttttgtttctaatgtgaacaaaaatatctttgcttgcagatgcatttgacacagagcagcttctggaatgcatggggcagctaaaacgggcacagcctgtaaatgttcctatatatgattttaagaatcaccgacggtcctctgaaagctttagaaaggtagttctgtgagcttttaatctaggtttcaagtcattggccttttgaataacattgaatagttgttgctttcccccctaatctctctgcaatgatatgaccatttatagctgatatatgccctttgtacatgaaaaaaaagaaaattgacaacattgcattttgtttcgaatgttactgtgcacatttgttaatttttcttgatgtattttcatgattccttattaacagttaagcgaataaactgcaatgttgcttattaaatgactgataaaattttgttttgctaggtcaatgcatcagatgtcattatattagagggcattttagtcttccatgatcaaagagttcgcaatctgatggacatgaaaatttttgtggacacaggtttctcattttcattattatgttgggtttgccttgaactgcttcctgttattagctggaatatttgttcacttcttttttgggtgcccatgatgcatccaatcagatgctgatattaggctagctcgacgaataaggcgtgatacagttgaaagaggtagagatgttagctcggtgcttgagcaggtacttcaacttgttttattttgcgtttttatattaatattgttcttgtgctttgtaaacagatttttgtctttttacctttctgatttcaatttttctacatatataatttgaaattctgttggcatctgtagtatggcaggtttgtgaagccagcatttgatgattttgttctcccttcgaaaaaatatgccgacgtgatcataccacgaggaggtgataatcatgtggcaattgacctgattgttcaacatattcgtactaagcttggtcagcatgacttgtgcaaaatctatccacatgtttatgtggttcaaacaacattccaggttagattatttgcacttatctttaaactttatgcttttctttgctaaatttcataatattcttctacttttcatggtgaattcaacagatccgaggaatgcatactctgattcgtgacagggacatcactacacctgactttgtcttttattcagatcggttgatccgtttggtactacttttgtatatatagcttttataacttctctttaacttcataatttttttttaaaagatccagattttgaattgattcaactcatttgctattggtatggaaatgccatgtcaggtagttgagcacggactggggcatttgccatttacagaaaagcagattattactccaacaggtattttcaaatggtaccacatatttttggtttcattctttttcagttgtttaacagtgttacaaattattcctacaaaagactgaaaagagagcgcacataacccatcctgccatcaaaacggctccatcccactgtgatgcagggggtgcacggtttcattctggttgctaatgctaatattgttttatatcataagttctgaactggtgtgaatccacctacgaaaaggagtttttttaattgttcatagttgtaagacaactgattcaaatttgactagtgtgctacataacaattctctaaaatcacccaaaaatttgttgagaaaaaaatttaggattgatgctgcagatgtggcctgcagctgggactcgttgttatggagaaccattacttaattaattctgctgctgcagacctttggaattagctactttcatatgcttctgaaattttcccttcgacgtaggagtagcaatttatggttggctgcaaacaggtttttaggggtctgatttagtgcaaatagaaaaacagcatacctagaacttcccaacaagtttgctacatgatactctgcatgccgtacctctatgcatttagtatttgaaattagctagctctacaatgctttcctttttcagaacatcaactcatgcatgtataatttgtttcttctgggtctagggtccatttatatgggagttgaattttgcaagaagctctgtggagtgtctattgtccgaaggtacgttatgaaatgatgaagtaattagcaaactaaaaattcaagcagacaacattggcaggtgcattttgaaggatggctgcatactgaattgactctgtccaacagcaattttctggatccttgtgttgagatgctaccttagaactcaagattatttgttattagtagaattttacattatactttgttttgtattggattttggaacctcttcctttatgtatgttatgtgttctgtaacatttttttctaggtcagactagtgcatttatcgatcttcatggtaccatgcatcatgtcccaatttttaactccaaattacttttttcctgtcattcttccgtaatgtcgtgaaatattagtattacagaagatatttcaacatcttttcattaacatgtatcattgtattgcagtggtgaaagtatggagaatgcattgcgtgcttgttgtaaaggaataaaaattggcaagattctaatacatcgtgttggagacaatggacagcaagtaagtacatagattttatgattaatgattattgaaaaaggatcctcagaatgacttagttcatatagtttgaatagttattattcactttgccattgcagcttatataccataaactgcccatggatattgctgaacggcatgttcttcttttggatccagtgcttggtacaggtcagttttgcatggtctctctatatgtattttcattcatttgttggaacttaagctaactgacttgtgaaccactgatcatggacgacattgcctttgctatgcatgcctgcacttatatatcttgcatttatccagaagcttttctggacattggaagatattattgcctattggtttccctgttgggaacaccttgattttttttaaaaaagtataaggcaagtatgaatcattagtccatgattatgttctgaatgaatgaacaatcaaagactgctgctgctgcaatgtttggctagatgctccaccagctttaggccatctgcaattttattcatagcgccagtatctgacactactttataactgagtgtccttcatcgttgttttgtactccgtaggtaactcagcaaatcaagctattgagcttctgataagaaaaggtgttccagaggagcgaatcatatttctcaatcttatctcggtaaatccattaacatactaaactaactgttctgttgctctccgccctattttagttttaactggatctgtctacctttatttgtaaacaggctcctgagggaattcagtgcgtctgcaagcgatttccgaggctgaagattgtaacctccgagatcgacaccgggttgagcgaggaatacagggtaatcccagggttgggagagtacggtgaccgctacttcggcacagataattgatgcttccatagcaatcgctggaggtgttgctccctggagaaggatcatgcatcggaagcaacatttcataccatgatgaaactatgtggatgagtcttagctgttgtatttggctgcagtgcagtactacatcgtttgtcaaattggtatgcgaggtaacatgtcagagaaattggtatgaacccgggcggccgaaagaaaagtatggtgtacatctgtagctgttgtttagcctccaaaaaccagaaccatggcgttaacggagggcaatgcaaattgtgtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0505800, RefSeq:Os09g0505800