Os06g0342100

From RiceWiki
Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0342100| Description = Signal recognition particle 19 kDa protein (SRP19)| Version = NM_001064105.1 GI:115467941 GeneID:4340957| Length = 4...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0342100

Description

Signal recognition particle 19 kDa protein (SRP19)

Version

NM_001064105.1 GI:115467941 GeneID:4340957

Length

4238 bp

Definition

Oryza sativa Japonica Group Os06g0342100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13745544..13749781

Sequence Coding Region

13745908..13746035,13749231..13749330,13749451..13749633

Expression

GEO Profiles:Os06g0342100

Genome Context

<gbrowseImage1> name=NC_008399:13745544..13749781 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13745544..13749781 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcggcgacctgaggagcagcatcaagaagtggaacgtcatctacccggtgtacctcaactccaagaagacggtcgccgagggccgccgcatcgcctccggcaaggcctgccccgaccccacctgcgtcgagatcgccgattgctgctcccacctcaagatccctcacgccatcgaattggataaggcgtatccacgagatttcttccaggtgggaagggtgagagtgcagctcaagaaggatgacggctccccagtcaatcctgcaatcaaaacaaagaagcagctgatgatccaaatcgcggagctagtccccaagcatcatggcaggactaagaagcaggaaccagcagcttcttcaactgcagggacttcaaaggggaaaggtggcaagaaaaagaagtga</cdnaseq>

Protein Sequence

<aaseq>MDGGDLRSSIKKWNVIYPVYLNSKKTVAEGRRIASGKACPDPTC VEIADCCSHLKIPHAIELDKAYPRDFFQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQI AELVPKHHGRTKKQEPAASSTAGTSKGKGGKKKK</aaseq>

Gene Sequence

<dnaseqindica>3747..3874#452..551#149..331#tgtctatagaccctcgagccctaatccggggacgagattcatccctccgcgaccaaagaaaccgaattaacctccgagtcctctgctccctctttgcttcttggaccaggatctgatctgcgcggcgctcgaccggaatcgcgcggagatggacggcggcgacctgaggagcagcatcaagaagtggaacgtcatctacccggtgtacctcaactccaagaagacggtcgccgagggccgccgcatcgcctccggcaaggcctgccccgaccccacctgcgtcgagatcgccgattgctgctcccacctcaagatccctcacgccatcgaagtatcccccatctttctccttttctttttcagatttatcggtttgggattgcctgttccctttgtttcttccttcgatttgtctatgtgctcatgtttgaagttctcatcttgtgcgtagttggataaggcgtatccacgagatttcttccaggtgggaagggtgagagtgcagctcaagaaggatgacggctccccagtcaatcctgcaatcaaaacaagtaagcactgggaacttttttttttctggaagcagtcttggtgaatggaactagtcactatgcttatgactgaatagagctcagggtttaattcccgttcgactattattgcggatactagagcagacaagtttacacatgagatgggccaatgcttttattttcaaattgttcctgcttttattgaatcatttgttagagggcgtcttgtaagaagtcctttcaatggcactaatcataggttctggtaaaaaggtcacactcttatcagttagaagacgcttgaatttttttgtccaatgtgattcctagcccatacaatattttccagatgttattagcgcaaatctgcttattgagaagaaacgaaacatgaattgcagaagaataacaaattcgttagatgtgccatcctcacttcatctgctactttctgttgctacatttcttcttgtggcatcactgagctattctgcagctgagtttagttcacccatgattcaaatcatcataaatagcacaatattagttcttctgtaacagtagtcctttgaatgccactacacttctaaattaatagcaaggagtaaacccattctagaatgaacagaaccaaatgtatgatgccttgcaatggtagttgccttgcctagttggtcatgttagtttggtctagtctgtcaccttatggctcacatagatacgattagcttgaatttcttgctgtaccatttcatgatttactgtattggtcaatagatgaaggcaccggatctacaattagtctaggatattctacaattagtttaggatattttcagctttgtagttactgctagataaggcgtaaaaatcaaatgcagaatcagtgactggccatttaatattcatatatattttttaatgttctgttgtactagtattctgctgatagtttctttcagttaacaaccaaattcataaatgaatcttctacatgagtttatgttgctagtttgttccagcaccctcatgtcgatttgcatttcattaacaagtagtatcgtatatcctcaatagtcaccttaataactaacttgttatgaaaagtgatgacttaggagcaagtaaagaaatgggtttagttgaactatatgtctgcacattaaaagagttaagaatggttaagcagagttaatcaccatgttgaactaggatgtgaacatgcatcataatatattttttcttcaaagtacttacatgtggcatgagttgcgttttgccatatattatgctctactctatgttctggccatgtcttttgccatccttctcttggcatacttttaagttcatgtctttccttgcaaaaaaaaaaaaaagaaggagaagaaggttcatgtcttttcccattattctcttggctgactttgaatgttgatcacaagtcttctcagtgtaggtcacacacaatcatgaggatttttaaatacgattgtttttttgcacccagttgccagaagtcatatcattttggcgtgaagtttccataaaccactaaagttgaattttcttaagacgaggtttgctgttctcaggagcaactaaagttggatgcatccagccctaaataaaatcttatcaaacgtaatgaaaatttttagagaagatatagtaagataggtaatgctgtcatctgcctctctgcagattctactggttcgagagttggttatgttgcttgaatgaaacaatagacaataaattttgttacaatgcacagtgttaacttagattagaaggcaaattctatccctcacagtcacaagttctaaaattggttttgtcatggctttaaagggtttggcaaaatgcatctcttaccttctgtagagcacataccaggtactatggacctactgctgtggtactatgactgtctgagtttttttgtatttcatccttttggagacaataattttcagtgcaaggttaatgctgtattgtagtgtcatgggcattggaccataaggccatggcccatggacagcccataccggttaagttagagataagattattagttagttagagataagataagattaagttcttacttaggggtcaagttgtactctctatataaggatgggattgtgtccattaagcaatgaatatcaattagtctaatctctccctcccaacaatgttcttctccctagcctaaatctacatcccttctccaggagctgacgccgcccggctatcttcccggcggtgtttatcccgtcatggcctcgggtcatgacatgtagtgcaagttgattatgtgaagtctaactatgttagatcatgcctatgcaacagtaatgaaattgtagtcgtcgtagccagctccatggtaattttgttgttatctgaataattggtttggtttttgccaagtgcatttgaggaaatttggagaaaacggcgtccactacattggaggaaactctgtagttttgatctaaactccttttgtgactgtttaatgttggtgtatcgatgtgtctgacctctttagttcatcatgataagcaccatggaaaagtgactggtggcaatgggttttgggttgaaaagatgcttacaggagagttgccaattggggtagagagggactggactatggagagtaactttgagtaattcaacttgtttattaactcaaaaagtcaaaatagatgagaactctccttaaaatagggcatcctgacaaattcaaccaatagataacaaggaaatatgctctaactcttatcccatggtagggtgaacaatgttcttgtacatgaagttttgagaggttggtggaaacatgttgctgctgtagtgctatacactagaacttaatgttattctgcattttgttttaacaccttctatgtcacttctcactgtaaaagttcttatttcctcttttcctttttcagtatagtacagagggtacctttagtgttattccaatcacttaagaaacctatttccttttcttttcctgccattttaatgctgaaatactcttaactaggatttcacctagttacttccattgttggctgtacactgttgaagtcttatagtgcaacaagataatcaccatgatgaatgttggacatgctttatgttctttctatcccacattgttactgacacaagaatctaatgttacagagaagcagctgatgatccaaatcgcggagctagtccccaagcatcatggcaggactaagaagcaggaaccagcagcttcttcaactgcagggacttcaaaggggaaaggtggcaagaaaaagaagtgatgatagtacaccatcttgtgtcgttcttctgtccataggaagttccctgagattcgtcgatgtctgttttgaggcctgaaattctgcgtctcttctgtgctctgaatttctaatttctcgggaaacatcaatcaatgcccgtatttcttgtgatttggactattggaaagaggaagattgcactgttgtttgcaatggatagcttccaagttatgtttttgaatagagctcaccttgaacatgcttatgctactaaaccccttgcaacagtgggctagcagaggttatgacttatgaggctaacagtggccatcggatgattaatcgttcatgtgtcaattgggccttggcctacgtttcttta</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0342100, RefSeq:Os06g0342100