Os06g0342500

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0342500| Description = KH domain containing protein| Version = NM_001064107.2 GI:297605766 GeneID:4340961| Length = 7179 bp| Definition = ...")
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Gene Name

Os06g0342500

Description

KH domain containing protein

Version

NM_001064107.2 GI:297605766 GeneID:4340961

Length

7179 bp

Definition

Oryza sativa Japonica Group Os06g0342500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13758698..13765876

Sequence Coding Region

13758893..13758918,13759003..13759129,13759217..13759354

Expression

GEO Profiles:Os06g0342500

Genome Context

<gbrowseImage1> name=NC_008399:13758698..13765876 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13758698..13765876 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcaccttaatttctttttccaccagatttgctgttcctctagtgacaagaagcacattagaagttgtcataccaaagagtgctgttgcaagccttactatgagagctggaagcaagcttgctcaaataagcgagatgtctggtgccactgtcacacttgctgacgaaaggcctgacgccatagaaaaagttgttcgaatatctggtactcctgagcaggctgacaaagctcagagcctgcttcagggatttattcttagcatccaagatgacattccttcaggctaa</cdnaseq>

Protein Sequence

<aaseq>MITLISFSTRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQI SEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFILSIQDDIPSG</aaseq>

Gene Sequence

<dnaseqindica>6959..6984#6748..6874#6523..6660#actctccgatccatggcgccctcccccttgtcgctctaaaccctaatccgaaccgagcaatcaaaccaaaatcgaacgaattcgaggacgagggtggggagccctcgaatccggcaatggatcgcccgcgctcctccaagcgcggctaccactacgaccaggactcgccgccgccccgctccaagccacgcttcgaccgccgcggcggccccaaccctaacaacagctaccaccgccgcggcccccccggtggcggcggcggcgaccgccgtggcggcttccagctgccacccgacgccgccccgcccccgcccccacccccgccgccttcctccgcggcggcggggggcggggggcccggcatgaccacctccttccgcatcctgtgcccgcagtccaaggtctacggcttcccgcccagcttcatcgccaaggtgcgggacgacaccaacgcggtcgtcaccatccacctgccctaccctggcgacgcggtccgcgtcatcgagacgtccgacggcgcgcgccgcgaggcggatgggcggccgccctcgttctcgccggcgcaggaggcgctcctcatggtgcaccggcggatcctggagacggaaccagacgacggcgatgaggatggcgagtatgggcccagggccaaggatgccagggaccgaggcaaggtgaccacgcgcctcatcgtgccgcgcctccatgttgggtgcctccttggtaagggtggcaagatcattgagcagatgagggccgagaccaaaacgcacatcaggatcctgccacgcgaccagcacacgccgcggtgtgtatcgttgtcggaggaggttgtacaggtaagaggctgcttactataatctggtaaaaaaatttcaatttttactttagacaatggtacattaacttggagttatgtgtataatttagttgcatagttatatattaatgtacggataaaaggaaagcaaaatgctaaacagattatgctacgtgttggacaagacttagatgtgttcttgatacttagaatatgctagaatcgaacatttgattgatgaactgctgtagagaagaatatttcctaataaaatttctagttagagtgatgtttagtttagttcggtttggtttattggccaaatttgattcactaaaatgtgtagtgtacgatgatcaaacctgaacactcccagatgaaaacgacaaaaaaaaggtttaaagaacagacacaaatcaaacaacaaatctaaaagcaggacaagacaaaaatcttcatgaatatattgaaaaaaaaaatgtttccacagcactgcaagatacctgcattaatacctacctttcttggtgcactttaataccacctaaaaataccgtaagtttttatgcagtctatgttagtatgtccatcaagcgctttggcttttttaaaagactttttgggacaaatacttctctagaaatccctgaatcacccctcaaatcatgctcagctcttcattcacttgtcctcatcaccattgaactctgttggctccatacaccgcttaacagtggtcagcggcagctgcagctgaggcacaccactcatcgtttaatcccatatgctgctcacttacggcagagatttgtggatgaatggatggtggcgctgacacaatggccagcttttgggtgaccgcatctttttggatgagcatgtcgctggagagcgctgcctcctagctcaagaaaatcagcatgcgggaacaaattcagaaggaatgatcagttgtggccttatggggctagtgaagtaatggaatgcttaggaaagggatctgacactgcttgagtgtgtggggtgttggtgtcatggggtgatggtgtcgacccaaccgtggtgctgctgccatacacgtaaaccggggcataccccatcccttcttcgccccattgacaatatttgggaatgactctgtgcatactattgggtctgttgccatggtttctgcagtaagagagaattcatagcttggatgggaggggtgaaattgagcagcaacttgtttcgatttggacagtgccgatagcctatgagggtacaggatcgggaacagcttgtgacttgtgatggcggagaactaatgtcaaatagcaacattgctttactgaacacgtggtagaaaatacgtgatactattagggtgaaaacaaattcagctatatatatagcaaaaatggtaatccctcagttccgtagaactgatttttttttccaaatatatctgaaaattttaggaaatgctccaagttccagtactctaggacttttcctactatctctcacaattatgttgactgatgactctgttcccatgatgtttcctgttcaataactgctagtacctgtgcactagttctggatgtttctcgctgttaactttataatgttgcttagcattaacctctctagtattcatatctttagcttcttttgagacattgagtttggcattataactgatttaatatcacaatatattaattcttgaactgtagtcatcaccgtgtagttggttacaagcaacacagtggaaactgatttaatgctttcaacagtaagaaatctgctctacccttgttcctagtcagtatttaatttcaactttgtttacacacacatttaatttaaaaataacctgttttcgttaggctttaataccagtttgtgaaattactctttgcacagtttatggggatttattcatatgatgtttgcttaatgctgagctcttgtattaaatgaaataaaataataatatagttggacatatagatttactcagctcacttatggaacaacttattatttgagactatatttcaaatattatatgaaagacactgttccagatttgtcttctagcaacagtggcttaaactatctctcttgtcaactttaaccttaaaagtgaaaactttagccttctgtttgcttagtgaaaactgttctgacattgatttgtaaattcattcaattatgatctgaaatgatctaggttcaacatgataaatctgtctcttagcacatgttgtaattgtgatttggatgcatagaaagataaatgacactctttattagacttctttttacttgtggcacttctcaccctactgtgtattattatcatgatatgatgttacaggttgttggagaggggaattgtgttaaaaaggctgtagcgataatctccgatcgcctaaaggaaagcttacaccgtgaccgtggccccttccgtggacggatgaattcaccagagcatcgatttcctcaagaggatgaatactatggtggtgcacagcagatgcctgcatatgaagaaccttatggtcgacctgatcaaattagaaataatactagcatggagctgccagggtatgagtttgattcaaatggtggcaagatcaatgatcacacagaaattctgttcgatgacatcatatttcgaattctttgcccaagtgacaaggttaacagtttagtcggaacacgtgatggattgttagagatgttacaggaagatgttggtgttgatattaggcttactgattctcttgatggctctgacgaaaggatcataatcatcacatcaagagaggtaatacacactcacttatgtcttttagttcaccactctccatactattactgacatggctgtttaagttatgtaaaaacttgtacgttataggaagggttgggttacagttctgtgggttttttcaaagttacatttgcagcttcaacagacgatgctatgagtgacgcacactgttttgtagtttttttccaatctcagttgcatatgaagttatatttatcagacgggtcctttttctgtgagaaattctactgatctactcattgcttcactaatctaaagtagtgttactagattgctagctagatttacacagtccaggcaatgtttgaagtattgcttgatgaaagtcaactattttttaactagtcattgtagtagttaagtaggttgtcttactgatgtgaatgaaacaagatgattttagcttgttggattatccacacctatagtcctatacagtaagctattcagatctgaggagctctttgttccaaaaatgcttacagcagtgtctgcttgcgtgtaacattagtttggcctcaattatgatggattttatttgaaatattatgttgttctttctgttggtattttctgctatttgtatcaaccatcattgttatagctggaatttgggttcagtacccctcccttcactgacatgtttcaatattttattcttaaaatggtccttacgattgttatagggcccagaccatgagctttttccagctcaggaagcattgctgcacctccaaactcatattgtagaccttggtcctgataaagacaacattattacaacaaggttacttgtcccttcaagtgaaattgcttgcttcgagggaagggatggatcattatctgatatacagagacagaccagtgcaaatgtacagatattaccaaggcaagctcttccatcttgtgctctagagtctgatgagcttatacaggtctgtcttctttcccagaagaaccttcatttttgttatcttgaggatttgactagatagtggagatccatgtgttaaatacctagatgactaggggtgggccgagaccgaacaaaaccgagccgaaccgaaccaaatcatcggttttttcagtcatcggattgtcctttggtttttgtttggttcttgttcagcttttggtcttttttgcggttttccatccttgccaaccgaagaagccgatcaaccaaactacctcccatgatcccagcccagtgtggcagcacctcaaggcccacgttcctccatccaacgaggcccatagcaactaggcctaatttatacaccagtaattgactggtttacctctacatagatggtggatcacgccatgccactggtgccacctagcacctcaaggcccacgttcctccatccaacgaggcccatagcaactaggcctaatttatacaccagtaattgactggtttacctctacgtaggtggtggatcacgccatgccaccggtaccacctagcacctcaaggcccacgttcctccatccaacgaggcccatagcaactaggcctaatttatacaccagtaattgactggtttatctccacgtagatggtggattacgccatgccgccgctgccacctggtctactgcttccgtgcgttagatgtgtttacggtttgttcggtgaagccgacacaccgaactgaattaatccggttacttcgggccggttttaatttttgttgacatgcacttctgttggcatatctcaaaaccgtgattctcggaaaccgaaaaagccgaaccgaatgaaccaatgaaaccaaacacccacccctatagatgaccataatccatatatttacaatttacaatacgcttgtttcttttgcttattgagccaagcctgggttgacctatcttctaactcgaatttgtgttcaagccaaagtgctcctagtaggcatgttatcttctttttactgttatattcttggtttgacacatgaatgatttttttactatgtttgccatattgtgtggttgaacaaattattgttcttgcagattgtaggagagattagagctgcacgggatgctcttgtgcaaataactgcaaaattacggagttacttctaccgcgagattcctggtcctaaccaacttggcaatattactgttcatggctccatttctccagcaaaaggttcacctagaggaccataccagggaagtgatattccaatgccatcctaccaacaagcacagcatgttccagcttcatggaaggtattctttagtacttcaatgtctttgttagtccttgcagaaaagcgcacgcgcacacacacacacagatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgtactatgtatggaattttctctattttttaccactgacctctcttgtccttttggcccatccaattttggcctcaattttcctttcattcataatgggcatggtttccctttctttcataatgggcatggtgaaacttggcagtgacaagggatttgcatggtttccctttctttcataatgagcatggtgaaacttggcagtgacaagggatttgcatagatgtgaaaagtttgtaatgtaggatgttaagtatttgaactttaatgcataataatgttcttcttctaggttatctaaagttagccattgttttggagtctttggacttaaaatttgtcattttgaatttcaggatagtggaggtggtgcaaatatgtcgtttgagcaagggagcaacattaatgatgatatgaggcaaagtgctgcaaaacggtatgtttttgtctttgccatcttgttctgtttggttttcacatgatcaccttaatttctttttccaccagatttgctgttcctctagtgacaagaagcacattagaagttgtcataccaaagagtgctgttgcaagccttactatgagagctggaagcaagcttgctcaaataagcgaggttctgtatattctaatttttcttgtagaacaaagggcaaacaactctacctattattaaccctctaaaactgtttgttggtcgcagatgtctggtgccactgtcacacttgctgacgaaaggcctgacgccatagaaaaagttgttcgaatatctggtactcctgagcaggctgacaaagctcagagcctgcttcagggatttattcttagcagtgagtttctttctatcggttttgttccttttcaacgttattagaatggaaaccatatgacaccttcatactctctttgagcagtccaagatgacattccttcaggctaattggagacagtggaggcctacgctgtcatgttcagtagggtgtaatgcatcttgagtttttgtgaggtattttaacctctgctagcatgaggtgtgcctgacttagcattattcgtgggcaaaatgttcatgtataccaccaagttgccaacatgtactgtccaaagtcctaaaacatattatgcggtttctcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0342500, RefSeq:Os06g0342500