Os06g0342750

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0342750| Description = Conserved hypothetical protein| Version = NM_001187843.1 GI:297724816 GeneID:9266184| Length = 12068 bp| Definition...")
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Gene Name

Os06g0342750

Description

Conserved hypothetical protein

Version

NM_001187843.1 GI:297724816 GeneID:9266184

Length

12068 bp

Definition

Oryza sativa Japonica Group Os06g0342750, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13772785..13784852

Sequence Coding Region

13779759..13780412

Expression

GEO Profiles:Os06g0342750

Genome Context

<gbrowseImage1> name=NC_008399:13772785..13784852 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13772785..13784852 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccaccgtctggacgccgtggtgaccatggcgccggtcaggggagagccgcgctgtctgtgagggccacgtgtgggctccgggctgccgccggcacgcccgcgcccgtctgggttcccgtcggcgggcgcgcggtcccttgggccgccgccaccgccgtggaggtgggctgctgcccaccgctctgcccgctcccgtgcccttcctcttgccagctcctcaagctccctgtcggcggtgatgtcgccggcgatggagccgttgatgctgctgcgcaaggtctcaacctctacctccgccgcacgtgccgcatcttccgccgcctccgcctccgcctccgccctggctgctgccaactccgctgccgccagtctggccgccctcgctgctgctgcagcggtctgagccgttgctcgcctgcgctcttctgctgcggcgagctcggcgtcctgctgacgctgagtgctcgaggcgaccgaacgccgagaccgagcgtcggacatggcgcacctccggggggctgctgcgtggagagggggaagggaaaggggaaggaggagcaaccggtgctgctgctgctgctggctgagagctcaaccgagcttgggaaggggtggaacaagagatgtttagcctataggaaagtgtggctctga</cdnaseq>

Protein Sequence

<aaseq>PPSGRRGDHGAGQGRAALSVRATCGLRAAAGTPAPVWVPVGGRA VPWAAATAVEVGCCPPLCPLPCPSSCQLLKLPVGGDVAGDGAVDAAAQGLNLYLRRTC RIFRRLRLRLRPGCCQLRCRQSGRPRCCCSGLSRCSPALFCCGELGVLLTLSARGDRT PRPSVGHGAPPGGCCVERGKGKGKEEQPVLLLLLAESSTELGKGWNKRCLAYRKVWL</aaseq>

Gene Sequence

<dnaseqindica>6975..7628#agttgcgctgctgctgctgccgccgccgcctgctggccgatccgaagagcattaaaaaatacagcgggcggagatgctggtttctccctcctccgtgcgtgccctcgccttcctccatcgccgcttccctccccctccccctccccctcgcccccacctcctccagccccccacccaccctgctcccccgcgctctgccatggccttctccgcggagccggcggccgaagaggctgaggaggaggccctcccgcccgtcaccggccccggcgaggtcaccgcggaggagtggaggcggtggggcacctcctcgccgctcccggccgcggtggccgccgtcgtcggcgagcttctcgagatggaggccgaggctggccagaagatgcgcttcggcggcgtcggctccaagattaaggtaaacggcttgttggcttcatctcaatccccttccacgtcctggatgctgcttgcagattcccgaggtgatacagcattgcaggaattgaaactgatatcggctcatggtttgcttgtttcttgaactggttactcatagggtgatttcaaagacatggaggacaagaagcacagggctgtctaccagacgctcgccgactcggacaagaagctgcagtacttctccgcgcggcagattgcttgccgcttgctagggagtagaggatatctgtgccagaaggtgatgtgacagtgtcagctagtatatgcacatcttgtcaatcacttctttttgcagcgatcatacacaatgcagcaatcaggccttaatggtttattcaactgaagcttatttttgctactaacatttatgtgccctttctttgctcttcttcatttcccacagtttgcctgatctgcctacctcttaaaactacagtgttggctgccaatggaagattgtatgtgtgcgaagcttggttcttgcaatctatggcagggaattagattctggctatatatgcatccgaaggtctcttcaaaggggtttatgttgaatttcttgttctgttctttcttctgggtatgccagtatctctaatactctattgttgcaggactttttgcgccaaaacaataccggaaagttactatggcaagtatttggcatccaagctgcacccttgtgtctctttggcatccaagagcacgaagacattatgtgggatgctttccagcgttcaggttgttacaaaagtcaatgccaactttcatctgttaaacatatgaaatcagttacattaaaaaagtatactaatgctttcaggagctcccattttctgtatagtagtttacattagcttcacttagcatgcttgttcaacgttttttttctcttaagcttctttggcgcacacaatctctcccgatgtgtttaaagtttaagctcttgtttatgatctggaaacataactggcctttagactctcaactgctgttaagtattcttcttggaaggggcagggaattagtgcgaactacacaaattatgctagtgattacactgcaacatacctttctttagaaatgcaaatgcttagtaaaagattatatttgctcgtttggaattctctgtgctagtgtctagataagtgtattcctgtcccaaccctcttcacatattgagtggcatttttaatttagaaggagcttaaaaatgtccacatttactgacaatctaatgaccaggggatcttttctttgttatttcatcaatgcattgctagtactgaaaatatttgcattatcgatgttccttttctgtttgcattctatccttctattttaatcattgcataaatgaatatactgttgcatattggaagttgtcttcgtggctgctgttttgaacctgttggcgcattgaacaactagggtagtgtttcacagaaacaaatccaaaccagaagtaaaaatgtatgaactagtaatagaaataagatttgaattaattttcttgtggcccatggaagattatttcattaatttgtcgtctaatatctctactctccctgctatatttagcaaggatatatgtatctgtgcacttcatgtttaaatactgtatatttccattctgatatggtttttgccaggaaagggaaaggtttcatttctatatccgaataagagtacaacccccatgtctgtcaaagatcttaaatttgatggtttgaacttgagttgtgatcatccggaggaggtatttattctgttctttaagctgtgtattaataagttgcactgttgcacaccctgttagaatttcaatggttactctcattgagaagaggatggcactcgagatggggcaattttctggttttcttcattcacaaaacacaaaagccatacctacccgagggaggttggatacatatatatagccatagctggctgctagcctattgctgcaccctcctagtctaaaattcgaaatttgaatgggatgctgtcctagagggcatccaaactgaataaagcataaaagaggcataaaggagatgctaactgctgctgtcctactaaccgcagctgtcctagcaactgaaaaatatgctaaagggtagatgctgtcctgaaaaaggtgaaactacccaaaagcaaaaagaagaatcacaaccaaggaccacaaagacttttccaacattctccccctaagtcttgtgcgtcgtcttgtggggaagttgggccatcccgatcctggagtagagctcgaggaacttgatcctcccaagaggcttggtgagcaagtccgcaagctggtccttggtgttgatgtagctcgccttgatgctcccttcctccaagtagctttggatgaagtggtacctcacccggatgtgcttgctccgttcgtgaaaaacggggttctttgccagggccagagcggacttgctatccaccctgagctccaccgttccagtgtctctgccgaggagaacactaagcagtcgagcaagctagagcgcctgggtcgaagcggcggaggccgccatgtactcggcctcgcaactggacagggccaccacctgctgcttgactgactgccagctaacgaggcacttgccgaggaagaagagaatcccgctcgtgctcttgctggtgtcgatgtcgccggcgtggtcgctgtcgctgtacccgacgaagtgtgccttgccaggacacctcgggtagtagagaccgtggtcgagagtccccgcaacgtagcggatgatcctcttcacagcctgctggtgctccgtcgtcggtcgctgcatgaaccgattgacgtagccgacggagaaggccaagtccggccgtgtgtgggtgaggtagcgaaggctccccacaagacgccggtactgtgtagcatccacctcctccgccgtgctgtcgcggctcagcttcagtctctcctccatcggagtgagagctgggttgcaatcggtgagcccaggcagctcaacgacgcgcttggcgtaggcggtctgtcgaagcgtgatcccggagtcgtcctggtgcacttcgatccccaggtagaaggagagaggccccagatcactcatctggaaggtggccttcatctcctcacttgaacgccgcgacctccgcatccttggtgccggtgatcaccaagtcgtcgacgtagacacccaccagcaaggcatttcctccattgccccgccagtagatggccgcctcgtgcgggctttgctcgaagccatccccttgagcgtggaatccaacttggcattccacgccctcggtgcctgccgcaagccgtagagggccttgtgcaggcgtagcaccttgccctccttgccggggatcacaaatcccggcggctggtgcacgtagacctcctccttcaagtcgccgttcagaaacgccgacttgacgtccatgtgatggacgccccagccttcctgagcagccagcgcaagaaggagtcgcacggactccatccgtgccacgggagcgaaggcatcatcgtagtcgatcccctcctgctgcacgaaaccgcgtgccaccaagcgagccttgtgcttgacgatggctccggcttcatccctcttcagcttgaacacccacttaagggtgatcgctcggtgaccacgagggaggtcagcaagctcccaggtgcggttctcctgaaccgcgtccatctccgactgcatcgcggcacgccatgccgcgtgtttctcggcctctgcaaaagaccgaggctcaccgtcgtcgcacgcaaggtgcaactgcgcctctaggtcgcgaggcaccagtcctggcaccggttggtcgccgagaagatcctccatcgtacggtaccgtagctgctcgccgtcgtggtacgcgtcgatgcgctccctgtcgtgggagagcggagtagcgaactccactgggctgcgctcaacacgagctggcgtcggagtagacgtgcttggaggagtggctgttggtgctggagcatgtggagtcactggctggggtggtgtcgacgaagagctcgtcgtagtcgaagtcgtggcccgagggtgtgttggtgtcggagtcggtggagattcgagggctggggtagacacgctcggtgaagaagagctgcctactcccccagctccctcgaagtggatgtactcgacggtgaagtcgtcgtacgtcggagtcgaaccatcgtccaccgccttgtcccatacccaccctcgcccttcgtcgaacacaacgtcgcgtgcagtgcgcacacgctgtgtctccggggtcgaggatacggtaggccttcgagccctccgcgtagccgatgaacacccctggggtgctcctgtcgtcgagcttgccgatgtggccaagctccttggcgaacgcgaggcagccgaagacccgcagatgggagaccgccggcttgcgcccatgccaagcctcgtacggtgtcctgccatcgagggccttggtaggcgagcggttgaggatgtaggctgccgtcaccaccgcctccccccagaagatggccggcatccccctctgcttgaggagggcccgagccatccccacaaccgtctggttgcgccgctcgacaacgccgttctgctgcgggctgtacggcgtggtgtagtggcgctgaatgccctcatcagcgcagtacgacgcgaattcagccgctgtgaattcgccgccgttgtcggtgcgcagcacgcgcagcttgcggccgcactccgcctctgcagcagcctgcgcatgcctgatggcgtccgcagcctctcccttgctgccgaggaccatcacccacatgtagcgggagaggtcgtcgacgagcagcaggaagtaacgtcgtcctcctggtgtggccggtgtcactgggccacacaagtccccgtgcacgagctcgagccactccttggctcggaagctcgtctgctggggaaaggggagccgccgctgcttcgtcaccacgcaaacgtcgcagagctgctccacgtggtcaaggcacggcatgcctcgcaccatctccttggcactgagctgcttcagggcctcgaagtggaggtgcccgaagcgctcgtgccactgccacgcctcgtcgtcccgacgagcggcgaggcaaactggttgtgcgacctgcgcgctgaggatgtagagtcgattagtgcctctggttaccttggcaagaaggcgacgacggcgatcccaaatcctcatgagtccgtcctcgaccaacacgcgtgagccgttctcatccagctgtcccacgctgatgatagaattcctcaatgcggggatgtagtagattccggtgagcagcctgtgctcaccggacttggcggtgaaggtgacggagccaacacccttgatctccacgccggaggcgtccccgaacttgacggagcctcggacgccggagtcgaactcggtgaagaactcccgtcggctggtcatgtgatgggtggcgccggtgtcgaggtaccactcatcagccttgtcgttgctggagccgttgcagagggagacgagtaccttcggctcatcaaggtggaggaaagccgctgcggccggtgccgctggaggtagctcgatgcttgcgtgagccaggagcagagccggctcttcctcttccacctgtgcgacgtgggcctggccgcgtcgtggctgtcgatagtctttggcccaatggccaagcttgccacagttgcggcaggcgtcgtctcgtgcctgcttgtggttgccggtggcaacgccctgggcgcctctgcgggcgccaccctcggcacgtcttcgcgcccaccgtagctggacacctccccgcgccttgcgcggcttacggccgcctgtcggggaagatgactccctcttcctcccgtcaccctgagaggcctcccactgctcccgagtgagatggagcttcccgccgatggtgatgggccccgagagaggctgtggctcatcaccatcgacgaccttgaggcgacctaacgcctcctcgatcgacattgtggagaggtccagcagagattcgatcgagcgagcgatctgcctgtacttctcagggacgcagcggaagagcttctcgacagctctctcctcgtcgtaggtgtcgtcgccgtactgcaccattttctgcaagagagtgttgagacggagagcaaagtcatcaacatcctcacctggcttgaaggccaggttctcccactccttgcggagtgcctgcagtgtggacttgcgggcgcggtcgctgtcgatgcgtgccgtagtgatggcgtcccaggcctccttggcagtccgcttctgggaaagcgagaactgcatctcgggcgggactgcagcgatgagggcatccagtgcctgccgatcctcgtcgtagtcgacgtcgccgtaccggactgcctcccacatgtgccgcacctggagcctcaccctcatcaccgcggcccactcgatgtagttggttttggtgagggtaggccacccaccgccgggaccaaagtccctgaccaccgtctggacgccgtggtgaccatggcgccggtcaggggagagccgcgctgtctgtgagggccacgtgtgggctccgggctgccgccggcacgcccgcgcccgtctgggttcccgtcggcgggcgcgcggtcccttgggccgccgccaccgccgtggaggtgggctgctgcccaccgctctgcccgctcccgtgcccttcctcttgccagctcctcaagctccctgtcggcggtgatgtcgccggcgatggagccgttgatgctgctgcgcaaggtctcaacctctacctccgccgcacgtgccgcatcttccgccgcctccgcctccgcctccgccctggctgctgccaactccgctgccgccagtctggccgccctcgctgctgctgcagcggtctgagccgttgctcgcctgcgctcttctgctgcggcgagctcggcgtcctgctgacgctgagtgctcgaggcgaccgaacgccgagaccgagcgtcggacatggcgcacctccggggggctgctgcgtggagagggggaagggaaaggggaaggaggagcaaccggtgctgctgctgctgctggctgagagctcaaccgagcttgggaaggggtggaacaagagatgtttagcctataggaaagtgtggctctgataccagatgttagaatttcaatggttactctcattgagaagaggatggcactcgagatggggcaattttctggttttcttcattcacaaaacacaaaagccatacctacccgagggaggttggatacatatatatagccatagctggctgctagcctattgctgcaccctcctagtctaaaattcgaaatttgaatgggatgctgtcctagagggcatccaaactgaataaagcataaaggaggcataaaggagatactaactgctgctgtcctactaaccgcagctgtcctagcaactgaaaaatatgctaaagggtagatgctgtcctgaaaaaggtgaaactacccaaaagcaaaaagaagaatcacgaccaaggaccacaaagacttatccaacacacctatctttagtaaagtttctatagcataaacaatgctgccttctttggaggatctgtttttccaatcacctccttttatccaacatgataagtactgatggtgtttggggtaactggtttcccatgctaatgcagttagaacaagtattttcttgtagaagtaacatggtacttcctccatgctttcttacttctcattttaagacatcaataagatatcaattacccacacccatttgaccattcctttttctagttataagttctcaaagattacctttatgagacatctacacaatgtcatctgcacatggcacatccaaataggttcgctgcacactctaaaacatcatgtaaataagtatggatgaaataatgaaatatcttttgcaatgtaggatgtgaaagatgaaccttttaactttgttttgcttgatggtacatggagtaattctgctgcattatacagaaggctcaaggttagttcagtgagtttcacattcaacgtaatgcactccctctttagtctggatttctgtttacatctaaacattatttgttcatgttatcttgataccatgattcagactagatagtttactaaaacaactgaaagctccagtgagctcattgcgtaattaaattatagataattccgatttccatataggtagttgggtgggctcattacctagttaagtaagtaattctgatttttgtgtgtctggaaagtagcaacatatgtgtctaggtgcatttgttcagtgatacatgatacagacatacagtattggagcatgaagaatctgagagatagtatgatctcccagaaacagcccagtagacctgtagactgtaaatgtttctgcttctcctcccatcaggattcctaagctttgttagcaggaaccccaatgccacttcgactgctaatccacttggtccagtcattccagtcatctaccattttctgccaatcaaatcctgatggattgaagagccaagtgataaccaagagctatattgatgatgtcagaagtatataggcagatgaatccgtagcaacatcaccttaaaactgatagactactagcagcaacatcagctcaagtcctttcacaaagtggcttctgaagtacattctgtatttctcagtcaaccttacatggcgaacaaaaaaacatctgccagttgctctatattttgcaccaccatggagaattgtgtgtcgaaaataatgtgacttggtcccaaggtagaaagtgaagaacactgaacagagctgaagcgtcatgattatgaaatcccccagggtgcttctgaaacctcttgctagttcagtcttggctaaggtcatcaaaagatctagctgcacaattgactgagatcccatagcttcttgaattgcactattccccctcatccatgcttgcttcataattgaaaactcagtccactattagctaggtaaagtcttccagattcaggactatttttgaaggaactaaaaataatgctccacctggaatctgaagaggcttactagattaaaaaaccatgtcaaggaacgcttgatgctacatcatgattcacggaaaaagaaaacaaatataacagggagtcagccaaatcatccttatttgataagataaggcagatggtatgatcaaactacctgttctacaaagtgtctgccctctaagagaagcccaatgacgaagctgtaggacgttttcctcatttgccccgacttcacttcctcttttggaattaattcttcccatgaaattattccatccatagtcatcaggaatcataattaaagaaagagtggaaaacttggtaacttaataacaaataattgaagcatgaagattgaagggaaacaaaacagaaaggaaacctggaaagagatcttttgtagatagaatataattgttcaccatcttcattctccagatcaagatcacttttggaatatactgttttttcactgtagtagggagtcataatactgccaagtacatagagtgacactgacacacaattatgtgggcttcaatcttttttattgaaattcttattatagtacacttgaacataacagggttatgagatattaccatggtgaattaattttttttatcttatcaaagaattctttcaatttccgtagagaatagtatctgatccgaacagaaggggcgggaaacaactgtagctccctgattccatacacaagttaggctgtgttcttccccaacctttcccaactcaactctctcgttttccgcgcacacgcttcccaaactactaaacggtgcgtattttgaaaaaaaaaattctacaggaaagttgctttaaaaaatcatattaatccatttttcaagtttattttagctaatacttaataaatcatgcactgatcgtcgctccgttttgcgtgttgggagtgaaggttcccaaccctcgctcccgaactcagccttagagccttatgaaagagggaagactgttattaatagcaacttttcttcagacaaaaaaaaactgctatttgagggaatgccgcatgggccctataacttacttttctatttccaaccaaagctagaaaagcagcgcatctatcccgagttttcctttgtctatcctgagttttcgtgtctagcttgctttctcactccccataacggcgttcaaagaaaatctcattctgatcctataacttataactaagtagtgtactaaagagaagactaggatgagtaagcccttacctcaagtctatgtgtggcaactagctatattactatttattagtcagactttttcttgatgggcctattgccgcctatttaggataataataaagtcttctacaattattggcacattggcatatagttactcctattagtgagaattgtattcggaggagagaaccttgcgctaaaagggctttgatttatggtatagattaggaattggaataaataaggctaactacaagagagaagagggtctacagccattctatgtcaacactgaagaataagacatctatccttactcttgcatcaacataagacaatcttcaagggaggagagtatattgaatatgaggctgccctttggcaaactcataataaggctgatgaaagcgaagcagaattgaaaacaaatatggtactccctctgtttcaaattacttgttctatatttgtactaagtcaaacattttaatctttgaccatcaatttctataaactcatactccctccattccaaaatataaggcacaaccaccattaacccaaagaccaaaaaataattattatcatcttatagtttagatcatcctaataaatataatgcatgcatccgataggattagataacatagagagtggaatattttaaaaaagtagtaatttaatagagatatgtcatagttaattgcatgcttgcatgcatgccttatattatggaacatctaagaaaagtggttctgccttatattatggaatggagggagtatagtttaacattataagatttatatttttagattcaccatgagaaatacttctataatatataattcacatgttaaactacacaattttctaaaaattaatggtcaaagatagacatgtttgacttaggacaaaccttgaaacgacaaataatttgaaacggagggagtacgctgttgatccttatagcacatcttgactctgaccatctctaaggtcaaccttatggtttgatggaataagtcttgtggctgattagtctttgcatctttttactttttcagcttttaggatgctctaggcataatcttcgttttcactttctgttttagatgctctaggacagcatcttcctttttcactttctaggacagcatctagactagctctaggatgctctagactagctgcagccagccagctaccagctataaatatgtatcccaccctcccccgagatggtatggcattcatgagaaaataaacagaaaattgcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0342750, RefSeq:Os06g0342750