BGIOSGA033480

From RiceWiki
Revision as of 17:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA033480

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033480, complete gene.

LocusTag

OsI_34729

Ensembl Transcript ID

BGIOSGA033480-TA

Ensembl Protein ID

BGIOSGA033480-PA

Length

3926

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21692601..21696526

Sequence Coding Region

21692601..21692804,21693465..21693644,21693721..21693886,21694018..21694152,21694230..21694340
,21694433..21694521,21694799..21694861,21695023..21695198,21695347..21695449
,21695848..21696023,21696187..21696295,21696413..21696526

Genome Context

<gbrowseImage1> name=IndicaChromosome10:21692601..21696526 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:21692601..21696526 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCTGAGATCGTGGGGTCCGCGGCGGCGCGCATGGCGGCGCCGGCAGTGAGGCCGGCTCCGCCCGCGGCGGCGGCGGCGGCGCCCCCGCAGCCGAGGAGGGCCGTGGCGGCGCGCTCCCTCAGGACCTCCACCTCCGACAGGGTGGCGGCGGATCTCGCGCTCGGGAGCAACGGCTCCCTCTCCGCTCAGGCCCCTCAACACAACACACGCGAGATGATATGGAAACTTGCTGAGACTGGAATGAACGTCGCACGCATGAATATGTCCCATGGTGACCACCAGTCGCACCAGAAGGTGATTGATTTGGTGAAGGAGTACAATGCGAAGAATACTGATGGCAATGTCATTGCTATTATGCTGGATACCAAGGGTCCAGAAGTGAGAAGTGGGGATGTTCCAGAACCAATCATGCTCGAGGAAGGTCAAGAGTTCAATTTTACTATTAAAAGAGGGGTGAGCACCAAAGACACCGTCAGTGTGAATTACGATGACTTCATAAACGATGTTGAAGTTGGGGACATACTGTTGGTGGATGGAGGAATGATGTCACTCGCTGTCAAGTCTAAAACAGCTGATACGGTTAAGTGTGAAGTAGTTGATGGTGGGGAACTGAAATCAAGGCGCCACCTAAATGTCCGTGGAAAGAGTGCGACTTTGCCATCTATTACAGAGAAAGATTGGGAGGACATAAAGTTTGGTGTTGAAAATGGTGTTGATTTCTATGCCGTTTCCTTTGTGAAGGATGCAAAAGTTATTCATGAACTGAAGGACTACCTTAAAAGTGCTAATGCAGATATACATGTCATTCCAAAGATTGAAAGTGCAGATTCAATACCAAACCTCCAGTCCATTATTGCTGCTTCAGATGGGGCGATGGTGGCAAGAGGGGATCTTGGTGCTGAACTTCCAATTGAGGAAGTTCCTTTGCTGCAGGAGGAGATTGTCAGAACATGCCGAAGCATGCAGAAACCAGTTATTGTTGCCACGAATATGTTAGAGAGCATGATAGACCATCCCACTCCAACAAGAGCAGAAGTTTCTGATATAGCAATTGCAGTTCGTGAAGGTTCTGATGCCATCATGCTGTCTGGTGAAACTGCCCATGGAAAGTTCCCACTGAAGGCAGTCAAGGTGATGCACACAGTGGCACAGAGAACAGAATCCAGCCTGTATAACCCAACTACATCTCCTAGTCTTGTTGCACATCCTCAGGCTCTGCTCAACGAGGAATTTTCGCAAAGCCAACTAAGCAAAATGTTTGGATCTCATGCTACAATGATGGCGAACACCCTTTGCACCCCAATTATTGTGTTTACACGAACCGGCTCCATGGCAGTCCTTCTCAGCCACTACCGGCCCTCGTCTACAATTTTTGCATTTACAAATGAGGAACGAGTGAAGCAACGTCTGGCACTCTACCAGGGTGTGGTTCCCATTTACATGAAGTTTTCTGATGATGCAGAGGAAACTTTCTCTAGAGCAATTAGTAGCTTGCTGAACGCCCAATTCGTGAAAGAAGGGGACTACGTGACCCTTGTTCAGAGTGGAGTGAAGTCGATCTGGAGAGAGGAGTCTACTCACCACATTCAAGTGAGGAAAGTCCAGGGCTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAEIVGSAAARMAAPAVRPAPPAAAAAAPPQPRRAVAARSLRTSTSDRVAADLALGSNGSLSAQAPQHNTREMIWKLAETGMNVARMNMSHGDHQSHQKVIDLVKEYNAKNTDGNVIAIMLDTKGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTKDTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENGVDFYAVSFVKDAKVIHELKDYLKSANADIHVIPKIESADSIPNLQSIIAASDGAMVARGDLGAELPIEEVPLLQEEIVRTCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKFPLKAVKVMHTVAQRTESSLYNPTTSPSLVAHPQALLNEEFSQSQLSKMFGSHATMMANTLCTPIIVFTRTGSMAVLLSHYRPSSTIFAFTNEERVKQRLALYQGVVPIYMKFSDDAEETFSRAISSLLNAQFVKEGDYVTLVQSGVKSIWREESTHHIQVRKVQG</aaseq>

Gene Sequence

<dnaseqindica>1..204#865..1044#1121..1286#1418..1552#1630..1740#1833..1921#2199..2261#2423..2598#2747..2849#3248..3423#3587..3695#3813..3926#ATGGCGGCGGCGGCGGCTGAGATCGTGGGGTCCGCGGCGGCGCGCATGGCGGCGCCGGCAGTGAGGCCGGCTCCGCCCGCGGCGGCGGCGGCGGCGCCCCCGCAGCCGAGGAGGGCCGTGGCGGCGCGCTCCCTCAGGACCTCCACCTCCGACAGGGTGGCGGCGGATCTCGCGCTCGGGAGCAACGGCTCCCTCTCCGCTCAGGTCTCTCTCTCTCTTTCTCCCCTTGCGCGCTAGCGGTTGTTTTTTTGGCGGATTCGTCACTGTATCGTACCACGTTGAGGCGATTGGATCCCAAGCGCTAGGATTAATTCGTCGTTTCCTCGTGCTTAGATTTGCCTGCTTGGGTGAATGACATTGTAGAGTACTGGAGTAGTTGCTGCATGCTTGCTACTATGTAGTAAGAGGCCTTTTGATCCAGAGCTGGCACACTCAAATGGAGGGAAACTGTGGGGGTGCAAGTTTTCGCTAGGAAAAAAAATATACATGTCATTTCCAACCCTCCGTGTTTGGGAAATTGCGGCTGTTCTTCCTTTTATTCTGATCTGTGTAAGGCTAGCCTGAATCACCAGCTAAAAACTTCAAAAATGCTTTGCTATGTGCTTACTTAGAAATGTATAGATGGTTGTGGAACCCAGGTGATGCCATACAGTTGGTTCAGTATTTCGGCGCAAGATTTACCTCTCCTTATTCTTGAATTTTTACATTTTCCATCATTTTAATTCATATTGTCTTCTGATACAATAAAGTGGTTAGCTCATTCCTTTCTTTGCATGCAGAGCATTGCTGAGAATACTGCTGACGCTACTTCGCAAGTGGTCTCTGCGAATTCCCGTAGGAAGACAAAGATTGTTTGCACCATAGGCCCCTCAACACAACACACGCGAGATGATATGGAAACTTGCTGAGACTGGAATGAACGTCGCACGCATGAATATGTCCCATGGTGACCACCAGTCGCACCAGAAGGTGATTGATTTGGTGAAGGAGTACAATGCGAAGAATACTGATGGCAATGTCATTGCTATTATGCTGGATACCAAGGTATACTGCCGTTGAACACATGAAATTTTGAATGCTGCAGCAAATGAGCTGTGATGATCGAACTTCAGTGATGCAGGGTCCAGAAGTGAGAAGTGGGGATGTTCCAGAACCAATCATGCTCGAGGAAGGTCAAGAGTTCAATTTTACTATTAAAAGAGGGGTGAGCACCAAAGACACCGTCAGTGTGAATTACGATGACTTCATAAACGATGTTGAAGTTGGGGACATACTGTTGGTGGATGGTGAGGACTGATCTATCAATCTTCATATCCTGCTTTGATTGTCTTTCTTTATGTTGAGTTAGCTTGCTTACAGGTAGACAGTTCAGAGTATGGCATCTACTTATCATTGGCTGTTTCATTGTGTGCTGTAGGAGGAATGATGTCACTCGCTGTCAAGTCTAAAACAGCTGATACGGTTAAGTGTGAAGTAGTTGATGGTGGGGAACTGAAATCAAGGCGCCACCTAAATGTCCGTGGAAAGAGTGCGACTTTGCCATCTATTACAGGTCGGTTGATTTCTCCATAACATGTTCAACCTCTAGATAGTTATGCACAAGATGCTGACATCCTTCTGCTTTAACAGAGAAAGATTGGGAGGACATAAAGTTTGGTGTTGAAAATGGTGTTGATTTCTATGCCGTTTCCTTTGTGAAGGATGCAAAAGTTATTCATGAACTGAAGGACTACCTTAAAAGTAACCATTTTCTCTGGCACACATGGAATTTCTAATATCTATATCCGGAACTTGATTAATCTCCTGTGTTCTGTGTTCTTTTCCAAATCCAGGTGCTAATGCAGATATACATGTCATTCCAAAGATTGAAAGTGCAGATTCAATACCAAACCTCCAGTCCATTATTGCTGCTTCAGATGGGGTAAGTAAGACCATGGACATTGGTTGTTTCAACCAGTTTGTATTAAAAACATCTTGGCAAGTGGCATCTCTTTTCAGCATATATTTGCCTTTAGATAGTTATCATGATAATGGGAGCCAAGCAATGTGTGTTTGGGAAGCTTTCGTGGAAATTCAAACACTTAATTCGTTGTTACCTTGTTTTCTTTTGTTCTATTTCTGGTTTCGTTTGTCCTTGAATGTTTTACACTTTCGTAACTGCTTAGTGCTAGATACTGAATCTCTGAAAATGTTTGTAGGCGATGGTGGCAAGAGGGGATCTTGGTGCTGAACTTCCAATTGAGGAAGTTCCTTTGCTGCAGGTTAGTTTAAATTTGTAGATAATTTTACTAGTGTAAGAAAACATGTGTTTGTTCCCCCCTCACTCTCTACATCCCTTTTATTTGTTTATTAGCACGCCTAAAATGCAACAAATGAATAAAGCACTAACAACATTTAAATCACATGTGTTTTACTTCTCCAGGAGGAGATTGTCAGAACATGCCGAAGCATGCAGAAACCAGTTATTGTTGCCACGAATATGTTAGAGAGCATGATAGACCATCCCACTCCAACAAGAGCAGAAGTTTCTGATATAGCAATTGCAGTTCGTGAAGGTTCTGATGCCATCATGCTGTCTGGTGAAACTGCCCATGGAAAGTAAGATTTCAACCTGACACAGGTTACTTTTTGTTTATGTTCCTCCATGTGCATCCAAGAAATTTATTTCTTTAAGCTCTTGCTGTGGGTGCATAGAATTCTGCTTTCCAATTAGACTTACCTTGATTGTGCATCTTACTGTGTTTAGGTTCCCACTGAAGGCAGTCAAGGTGATGCACACAGTGGCACAGAGAACAGAATCCAGCCTGTATAACCCAACTACATCTCCTAGTCTTGTTGCACATCCTCAGGTATATCTCTTATTCCCACAACTTTAAATTTACCATATGGTAGCTTTTGCATTGTTCGATGTTCATTGCTTAGAGCAAGTTTAATAGTATAGCCAACTGCTGGCTCCAAATCATTTATAGTCAACTTAATAGCAATCCATACAATAGTTACCTATAAACATATACTACACAATTAATATTTGGTCCTACCTGTCATACATATATGTATTTTGGAGTCCGTGCTGCAGCTGGCTACAAATTTGTAGCCCGGTGCTCTTCTCTCTCCTCTTTTATCTCCTCAAAATATGTTTATAGCTGGCTTGTAGTATGCTATTGCACCTGCTCTTAGACATCAAGTTCCTTTCTTAAGTTTGTTACCTGAATTTTAGCACCTCATTTTCTCATGATTCTTTTGGTAGGCTCTGCTCAACGAGGAATTTTCGCAAAGCCAACTAAGCAAAATGTTTGGATCTCATGCTACAATGATGGCGAACACCCTTTGCACCCCAATTATTGTGTTTACACGAACCGGCTCCATGGCAGTCCTTCTCAGCCACTACCGGCCCTCGTCTACAATTTTTGCATTTACAAATGAGTAAGTTTTTTTTGGATTTCTACCTACATGCAATGCCAAATCTTTTTTCCCTAGTGTTTTCATTTTAGTAAATCAATTTTGTAAACATTCTAAATAAATAAATGATAAAAGTTGAAAAAGATGCTCTGGAGGACTGACCATTATGAGGAAACTGTTGTTGCAGGGAACGAGTGAAGCAACGTCTGGCACTCTACCAGGGTGTGGTTCCCATTTACATGAAGTTTTCTGATGATGCAGAGGAAACTTTCTCTAGAGCAATTAGTAGCTTGCTGGTAAGCATATGTACTTCACGCTGCCGACACAGTTGATATTATTGACACCATTTTTCAGTCCTTTTACAAAGTACTCCTGTGTTTCTCTTATGAACCGTGGTTTTGAATGTTTGACAGAACGCCCAATTCGTGAAAGAAGGGGACTACGTGACCCTTGTTCAGAGTGGAGTGAAGTCGATCTGGAGAGAGGAGTCTACTCACCACATTCAAGTGAGGAAAGTCCAGGGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033480