Os06g0344900

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0344900| Description = Similar to NAM / CUC2-like protein| Version = NM_001064113.1 GI:115467957 GeneID:4340969| Length = 1799 bp| Definit...")
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Gene Name

Os06g0344900

Description

Similar to NAM / CUC2-like protein

Version

NM_001064113.1 GI:115467957 GeneID:4340969

Length

1799 bp

Definition

Oryza sativa Japonica Group Os06g0344900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13872018..13873816

Sequence Coding Region

13872018..13872509,13873187..13873816

Expression

GEO Profiles:Os06g0344900

Genome Context

<gbrowseImage1> name=NC_008399:13872018..13873816 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13872018..13873816 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggtgcagcgtgctggggctgggcggtggcgggggcgggggcgggcggctggacggcgagctgccgccggggttccggttccacccgacggacgaggagctgatcacctactacctgctgcggaaggtggtggacgggagcttcaacgggcgcgccatcgcggagatcgacctgaacaagtgcgagccgtgggagctgccggagaaggccaagatgggggagaaggagtggtacttctacagcctccgcgaccgcaagtaccccacgggactccgcaccaaccgcgccacgggcgccggctactggaaggccaccggcaaggaccgcgagatccgcagcgcccgcaccggcgccctcgtcggcatgaagaagaccctcgtcttctaccgcggccgcgcccccaagggccagaagacccagtgggtcatgcacgagtaccgcctcgacggcacctacgcctaccacttcctctcctcctccacccgggatgagtgggtgatagccaggatcttcaccaagcccggcgtgttccccgtcgtccgcaagggccgcctcggcataagtggcggcggcggcgacacctcgtgcttctcggactccacctccgcctccgtcggcggcgggggcggcacctccgcctcgtcggcgctgcgcgcgccgctggctgaggcctcgctgttcgccgccgccgcggcgccagccgttgacggcgccgacagcagcaactacggcgggggcggcggcgccggcagcgccaccgccaccgccaacttggtcaccggccttgagctcgtgccctgcttctccaccacagcccacatggatgcctcgttcggcaccgggcagtacaacccggccccgctggccgtcgagccgccgccgccgccgccggccttcttcccgagcctccgctcgctgcaggagaacctgcagctgccgctgttcctctccggcggcatgcaggcgggcgtgtcgtcgcagccgctcagcggcggcggggccttccactggcagtccggcatggacgtcaaggtcgagggcgccgtcggccgcgcgccgccgcagatggccgttggccccggccagctcgacggcgcctttgcatggggcttctag</cdnaseq>

Protein Sequence

<aaseq>MERCSVLGLGGGGGGGGRLDGELPPGFRFHPTDEELITYYLLRK VVDGSFNGRAIAEIDLNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATGAG YWKATGKDREIRSARTGALVGMKKTLVFYRGRAPKGQKTQWVMHEYRLDGTYAYHFLS SSTRDEWVIARIFTKPGVFPVVRKGRLGISGGGGDTSCFSDSTSASVGGGGGTSASSA LRAPLAEASLFAAAAAPAVDGADSSNYGGGGGAGSATATANLVTGLELVPCFSTTAHM DASFGTGQYNPAPLAVEPPPPPPAFFPSLRSLQENLQLPLFLSGGMQAGVSSQPLSGG GAFHWQSGMDVKVEGAVGRAPPQMAVGPGQLDGAFAWGF</aaseq>

Gene Sequence

<dnaseqindica>1..492#1170..1799#atggagcggtgcagcgtgctggggctgggcggtggcgggggcgggggcgggcggctggacggcgagctgccgccggggttccggttccacccgacggacgaggagctgatcacctactacctgctgcggaaggtggtggacgggagcttcaacgggcgcgccatcgcggagatcgacctgaacaagtgcgagccgtgggagctgccggagaaggccaagatgggggagaaggagtggtacttctacagcctccgcgaccgcaagtaccccacgggactccgcaccaaccgcgccacgggcgccggctactggaaggccaccggcaaggaccgcgagatccgcagcgcccgcaccggcgccctcgtcggcatgaagaagaccctcgtcttctaccgcggccgcgcccccaagggccagaagacccagtgggtcatgcacgagtaccgcctcgacggcacctacgcctaccacttcctctcctcctccacccgggtcagcactttccccatttattttcttcaccttttgcccattgtgttgttcacttcatcctttggaaactttctgttgttgttcttgctgcggatgatgtgtgcaacatatggtaggaataagtcacgaggggtctagggcacaatcgctagctctgagcttgcttttctggtgtgaagtcatcagcagcgagctccctccctgcgctgctatgctacttcctgtagcagcgcaggggtgctgcgacgcagattgctgcatactgtacgtagatatggtaatcggtcagcttagcgcagtgaaagatcagaggctgcagcttagcaggatacgaatctttttttggcctcatggaagcttatatgcaatccaacgcatgaatgcgtggatacatgagagcacaaggtgtaaatgcatactgtactccttacgtatttgcaatttgcatttagcaaaaatagatgccttgggcatacatctgcgtttgtcatttgagcgagtaaaccaaagaggaacaaagttcgccttgtgcaacgtgcacgcgaaatcgtagtactgtactgctgctacacaaccttgtactaccctttttttagttcatgatatatatacacagttaaattcgtgttgctacacaaccttgattcttaatttctctgtgttgatgtgtcgtgcaggatgagtgggtgatagccaggatcttcaccaagcccggcgtgttccccgtcgtccgcaagggccgcctcggcataagtggcggcggcggcgacacctcgtgcttctcggactccacctccgcctccgtcggcggcgggggcggcacctccgcctcgtcggcgctgcgcgcgccgctggctgaggcctcgctgttcgccgccgccgcggcgccagccgttgacggcgccgacagcagcaactacggcgggggcggcggcgccggcagcgccaccgccaccgccaacttggtcaccggccttgagctcgtgccctgcttctccaccacagcccacatggatgcctcgttcggcaccgggcagtacaacccggccccgctggccgtcgagccgccgccgccgccgccggccttcttcccgagcctccgctcgctgcaggagaacctgcagctgccgctgttcctctccggcggcatgcaggcgggcgtgtcgtcgcagccgctcagcggcggcggggccttccactggcagtccggcatggacgtcaaggtcgagggcgccgtcggccgcgcgccgccgcagatggccgttggccccggccagctcgacggcgcctttgcatggggcttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0344900, RefSeq:Os06g0344900