Os09g0506300

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0506300| Description = Cyclin-like F-box domain containing protein| Version = NM_001070143.2 GI:297609772 GeneID:4347512| Length = 3399 bp|...")
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Gene Name

Os09g0506300

Description

Cyclin-like F-box domain containing protein

Version

NM_001070143.2 GI:297609772 GeneID:4347512

Length

3399 bp

Definition

Oryza sativa Japonica Group Os09g0506300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20247983..20251381

Sequence Coding Region

20247983..20248187,20249550..20249656,20249930..20250121,20250641..20250751,20251082..20251381

Expression

GEO Profiles:Os09g0506300

Genome Context

<gbrowseImage1> name=NC_008402:20247983..20251381 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20247983..20251381 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaggacgacaagcgacgacgaagccttgcctcgctgctcgccgccgcctcgcccacgccgctgccgcgcccgaccgccgccacccgttggtgaagaggcggcgctggcggttgcggacggtgacggcgcggccctcggcgaggacgtgggggaggtaggcgttctcgacgaggtggtggaaggtgtggcggtggtggaagacggttcgattgattcagcggctaaaagaaagggatcactctgtcaacaagttgcaaattctgaaggcaacaaaaaaacaagatattcagggctagaccttccagaggaaatctggtgccatatacactccctaatggcattcaaagatgccgcccgtgctacatgtgtgtctcgtgcttttcatcgttcctggcaatgccatcccaatcttatattttgtattggaatactgggctcggatttcatcaacaaatttgatcgcattgtgaaaaaccactcaggcattggcatcaagtcgatgaagacactatctttgcaatactattgcaacgctgtctattatgctcgtgtagagtctatacccaatgtgccaaatcttgaaactctcaccatttgctcgtatcacgagataccaaaggacagcatggaggatgactcaatttttggagattcctcaaatatgaggcagatgcaagaatatcgtcatgacaacctccagagtgtggtgatcacttgtttctgctccgcgaagagcttgatcgagctaacatgttgtattcttgactgtacaacgtcacttgagtaccttacactggatactactcgtggtgtttatagctgttctacaggtaaacacagccaatgctttcctatggacaaggccatgatccctaaagccaacagggctatgttggctatcgaaacataa</cdnaseq>

Protein Sequence

<aaseq>MRRTTSDDEALPRCSPPPRPRRCRARPPPPVGEEAALAVADGDG AALGEDVGEVGVLDEVVEGVAVVEDGSIDSAAKRKGSLCQQVANSEGNKKTRYSGLDL PEEIWCHIHSLMAFKDAARATCVSRAFHRSWQCHPNLIFCIGILGSDFINKFDRIVKN HSGIGIKSMKTLSLQYYCNAVYYARVESIPNVPNLETLTICSYHEIPKDSMEDDSIFG DSSNMRQMQEYRHDNLQSVVITCFCSAKSLIELTCCILDCTTSLEYLTLDTTRGVYSC STGKHSQCFPMDKAMIPKANRAMLAIET</aaseq>

Gene Sequence

<dnaseqindica>1..205#1568..1674#1948..2139#2659..2769#3100..3399#atgaggaggacgacaagcgacgacgaagccttgcctcgctgctcgccgccgcctcgcccacgccgctgccgcgcccgaccgccgccacccgttggtgaagaggcggcgctggcggttgcggacggtgacggcgcggccctcggcgaggacgtgggggaggtaggcgttctcgacgaggtggtggaaggtgtggcggtggtggaaggtgaggcggtggcgccgcagaagtcgtcggcgacagccccgtggtcgtcgacggtgagggccatgcggtcagcgccctcggcgacgtcttgacggccgcctcactgctcgccgtcgcgcccggccgccgcctcgcccaggcagccgccgtgcccgactgccgcctcgcccaggcagccgccgtgcccgactgccgcatcgcccagccgccgcctcggcccggcggccgcctcgcccagccgccaccacgcccgaccgccgcctcacgcccaaccaccggcctcggcccggtggccgcctcgcccggccaccacctcggcctggcccccgcctcacctaggccgccgccgcgcccgagcgccgccacctcgccccagccagttgagggagtggttgagggagaagagataaggtatagagagagggttgagggaggctgagagagaggacgggataaaagaagagataaggtagagagaaaggggagtgattgagagggaataaaggggaaaaaggaagagagagataggaaaaatttgaagtgggtgtgagggaaaggagggaggaatatcccgtgtggttggattaggacgtccgcaccggaaaatcaattttcccgtgcgggcgacaccctagcgccggttccctatttttccgtgtggttccacttatggaccgcatggaaacaaaaaggggggcatccagtaaaatcaatcgtgcagtagtgcgatgagcaatgtttattttgactgtcatcatccatgcactaaaaaaaatatgagatcgactttaggtgtgaaaagatagatatttgctccggtctagcaaaaagtatatcgagttaccggtacctcatgatatcaaatcatttttgatcgttagatctagttaggtaggattggcattgttagatccaagagatttgctccgttccaacgattaaaaacgatttgatgtctcacggtaccggtagctcgatgtactttttattggatcggagcaaatctcccaaagataacatgggagcctccgtgcctagttttactgtagtatgggttgtatgggggtaaatatggggttaagttgggaggaactaggaaggagtgcaatgtctccatgggggaaccgatgaagctaagcacccataaaactatattgcatttgttgcttccaatgaccaatataagcaagaacttgacacagttcactacttttttctattgaagcaagagattactagtaccctgctttggttgaaagcatataaggaggttttgggtataggacagctgttaaggacaccaccttactattttatttccctgttcatgtctgtacataaccatgcctgatgtatctgcagacggttcgattgattcagcggctaaaagaaagggatcactctgtcaacaagttgcaaattctgaaggcaacaaaaaaacaagatattcagggctagaccttccagaggtatgtcaccaaaagccgacaatggaagactctaagtagcctctaagatattagaagtgaggattcactatgagtctatgactgctagtagcctctaactgtgcacaccggtggtcctatgtcagtatgtcacctagataaaattttgtgaatggatctttagtgctcctatgccttataagctactagtattgttttctcttccaatagaaccagttgtttaccttcacaatagtttgttttttaatcttttatccttgcttgtgcatgcaggaaatctggtgccatatacactccctaatggcattcaaagatgccgcccgtgctacatgtgtgtctcgtgcttttcatcgttcctggcaatgccatcccaatcttatattttgtattggaatactgggctcggatttcatcaacaaatttgatcgcattgtgaaaaaccactcaggcattggcatcaagtcggtaaactttgaatatgatagttcttacaatactagaaggagcactagcatcagccatcattttgatagttggcttcatattgctattacaccatggatcgaaaaactctcccttaggctatctcattattcataaaatgtggagtacaacttaccatgcacaattctgtctgatgggagagcaagctcaatgcgacatctttatcttggcagttgtagcttccatcccacaatcaaccttgacttgagaagcctgatgaagttgcatctgtttaatgtccatattacaggagatgagttagggtgccttctcttcagttgttatgctttggagtggttggaacttgagcattgtgatgaaatagtttgcatgaaggtaccttgtcagttgcaacgcctcaatcacctgaaagtgtttgaatgcagaatgctgcaagtaatagagaataaggctccaaatatttgcagttttgattttggaggtaaacacgtacaactcttgcttggtgaatcgttgcagatgaagacactatctttgcaatactattgcaacgctgtctattatgctcgtgtagagtctatacccaatgtgccaaatcttgaaactctcaccatttgctcgtatcacgaggtacactcaaaaactcgaaaatacacttgcggtattcatataacaatacttacacattagaagaatgtctccagtctgatgatcatcatatttatgcagatggttaacacaccaatgttgcctagcaaattcctccatctcaagtgtttgactatcgatcttgctgaagtttcccatgcatatgattatttctctctagtttcttttcttgatgcttctcctttcttggagactttacttctgggtgtaagataattttcattctgcaaagttatctagtgtctatggtagtaaccatcaattaaagtatatttggcttttcatctccagataccaaaggacagcatggaggatgactcaatttttggagattcctcaaatatgaggcagatgcaagaatatcgtcatgacaacctccagagtgtggtgatcacttgtttctgctccgcgaagagcttgatcgagctaacatgttgtattcttgactgtacaacgtcacttgagtaccttacactggatactactcgtggtgtttatagctgttctacaggtaaacacagccaatgctttcctatggacaaggccatgatccctaaagccaacagggctatgttggctatcgaaacataa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0506300, RefSeq:Os09g0506300