BGIOSGA033677

From RiceWiki
Revision as of 17:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA033677

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033677, complete gene.

LocusTag

OsI_36738

Ensembl Transcript ID

BGIOSGA033677-TA

Ensembl Protein ID

BGIOSGA033677-PA

Length

3384

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19874512..19877895

Sequence Coding Region

19875018..19877895,19874512..19874876

Genome Context

<gbrowseImage1> name=IndicaChromosome11:19874512..19877895 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:19874512..19877895 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTCCTGTCCTGCATTCAGGTACTGATCGGGATGCCCTTCTCTGCCTCAAGTCTCAACTCTCTGATCCATCAGGAGCCTTAGTTTCCTGGAGAAATGAGTCTTCCACGTTCTGCAGTTGGCATGGAGTGACATGTAGCAGACAGAATGCATCTCAGGTTATCTCTCTGAACCTTGAATCGCTGAACCTCACAGGCCAAATATTTCCTTGCATTGCTCAGCTCAGCTTCCTAGCCAGAATTCACATGCCCAACAACCAGCTCAATGGGCACATTTCTCCTGACATTGGTCTTTTAACTAGACTTAGATACCTCAATCTTAGCATGAATTCCTTGAATGGAGTTATCCCATATGCCATATCGTCGTGCTCTCACCTCAAGGTCATCAGCCTACAGAACAACTCCCTCGAAGGTGAGATCCCACAAAGTCTTGCTCAATGTTCATTTCTTCAGCAAATCGTTCTTAGCAACAATAATCTTCAAGGAAGCATCCCTTCCAAGTTTGGTTTGCTTTCCAACCTTTCTGTCATATTGCTCTCCAGCAACAAACTAACTGGCATGATTCCTGAGCTTTTGGGAGGTAGTAAGTCTCTCACACAGGTGAATCTAAAAAACAATAGCATCAGTGGTGAAATCCCTCCGACTCTATTCAACAGCACAACTCTTTCTTACATAGATCTCTCACGCAATCACCTTTCCGGGTCTATCCCACCTTTCTCTCAAACCTCTTTACCGCTACGATTCCTTAGCCTTACTGAAAACAATCTGACGGGAGAGATTCCACCCTCAATCGGAAACATTTCTACGCTGTCATTCCTGCTTCTTACTCAAAATAATTTACAAGGGAGCATTCCAGATTCCTTAAGTAAACTTACCAATTTGAGAGTATTAAACCTGAAGTATAATAAATTATCAGGCACTGTTCCCCTAGCACTGTTCAATGTCTCATCTCTTACTAATCTTATTCTCAGTAATAACAAGCTTGTAGGGACAATTCCTGCCAACATAGGTGTAACTCTTCCAAACATCATAGAATTGATAATAGGAGGGAACCAATTTGAAGGCCAAATCCCTAATTCTCTGGCCAATTCCACAAACCTCCAAAATCTTGATATTCGAAGTAATTCATTCACCGGTGATATTCCTTCACTAGGACTCTTATCAAATTTGAAAATACTAGACCTCGGAACAAATAGACTTCAAGCTGGAGATTGGACATTCTTTTCCTCCTTAACAAACTGTACACAATTACAAATGTTGTGCTTGGATTTTAATGGTTTTGAGGGGAAAATACCTAGTTCCATTGGTAACCTTTCACAAAACTTGAAGATACTTCTCTTAACAGAAAACCAATTGACCGGTGATATACCTTCAGAGATAGGAAAGCTCACCAGCCTCACTGCCCTTTCATTGCAATCGAATAACCTCACAGGGCATATTCCTGACACAATTGGGGATCTTCAAAACCTATCTGTCCTAAGCTTAGCTAAGAACAAACTTTCTGGGGAAATCCCACAATCAATGGGGAAACTAGAGCAGCTAACTATCCTGTATTTAATGGAAAATGGATTAACTGGTCGTATCCCTGCTACTTTAGATGGTTGCAAATATTTGCTTGAACTAAACCTTTCCTCTAATAGCTTCTATGGAAGCATTCCATATGAGCTTTTTTCCATTTCCACACTTTCTATAGGCTTAGATTTGTCCAATAACCAACTTACTGGGAACATACCATTGGAGATTGGTAAATTGATCAACCTAAATTCACTCAGTATTTCAAACAACCGATTATCAGGAGAGATCCCTTCGACCCTTGGTGATTGCCAGTATTTGCAATCATTGCATTTGGAGGCAAATTTTCTAGAAGGAAGCATCCCAAGATCTTTCATCAACTTAAGAGGCCTCATCGAGATGGATCTTTCCCAAAATAACTTGACCGGTGAAATTCCTGATTTTTTTGGATCATTTAGCTCTTTAATGGTTCTCAATCTATCATTCAATGACCTTAATGGGAAAGTTCCAAATGGTGGTGTGTTTGAAAATTCTAGTGCTGTGTTCATGAAAGGAAATGATAAGTTGTGTGCAAGTTTTCCGATGTTTCAATTACCACTTTGTGTGGAATCACAATCTAAAAGGAAGAAGGTACCCTACATTTTGGCTATCACTGTTCCAGTTGCTACTATTGTTCTGATCAGCTTGGTATGTGTTAGCGTCATCCTTTTGAAGAAGAGATACGAGGCCATAGAACACACCAACCAACCATTGAAGCAGCTCAAGAATATCTCGTATCATGATTTATTTAAAGCAACAAATGGTTTCTCTACGGCAAACACTATTGGTTCGGGGAGATTTGGAATTGTATACAGAGGTCACATTGAGTCTGATGTGCGCACAGTTGCTATCAAGGTATTCAGACTTGACCAATTTGGAGCACCAAGTAATTTCATCGCTGAATGTGTGGCATTGAGAAACATCCGCCATCGAAATCTTATAAGAGTGATTAGCCTATGTTCAACCTTCGATCCAACTGGAAATGAATTTAAAGCACTTGTTCTTGAGCATATGGTCAATGGAAACCTAGAAAGCTGGGTCCATCCAAAACCATACAAAAAAAATCCAAAAGAAACATTGAGTTTAGTCTCAAGAATATCAATCGCCGTGGATATAGCAGCTGCATTAGAATATCTTCATAATCAATGTACTCCTCCTCTAGTTCATTGTGATCTTAAACCAAGCAATGTTCTTTTGGATGATGAAATGGTTGCTCATGTTAGTGACTTTGGGCTTGCAAAGTTTCTTCATAGCGACTCCTCACTAGCAAGCAGTACTTCATATAGCATTGCTGGACCAAGAGGATCAATTGGCTATATTGCACCAGAGTATGCCATGGGGTGCAAAATCTCATTTGAGGGTGACATCTACAGCTATGGAATTATTCTTCTAGAGATGATCACAGGAAAATATCCTACTGATGAGATGTTTACAGATGGCATGAACCTTCACAAAATGGTGGCGTCAGCAATTCCAGACAAAATTGGTGATATTGTGGAACCCAGTCTTACTGAAGATCATTTGGGTGAAGACAAAAATTACGAATCTGTAGAAACGCCAAGGTTTTTCATGCAATTGGCAAAACTAGGCCTCAGATGCACTATGACATCACCCAAGGATCGACCAAAAATCAAGGATGTTTACACTGAAATCGTAGCCATCAAAAACATGTTATCAGCACTGCAATATTAA</cdnaseq>

Protein Sequence

<aaseq>MFPVLHSGTDRDALLCLKSQLSDPSGALVSWRNESSTFCSWHGVTCSRQNASQVISLNLESLNLTGQIFPCIAQLSFLARIHMPNNQLNGHISPDIGLLTRLRYLNLSMNSLNGVIPYAISSCSHLKVISLQNNSLEGEIPQSLAQCSFLQQIVLSNNNLQGSIPSKFGLLSNLSVILLSSNKLTGMIPELLGGSKSLTQVNLKNNSISGEIPPTLFNSTTLSYIDLSRNHLSGSIPPFSQTSLPLRFLSLTENNLTGEIPPSIGNISTLSFLLLTQNNLQGSIPDSLSKLTNLRVLNLKYNKLSGTVPLALFNVSSLTNLILSNNKLVGTIPANIGVTLPNIIELIIGGNQFEGQIPNSLANSTNLQNLDIRSNSFTGDIPSLGLLSNLKILDLGTNRLQAGDWTFFSSLTNCTQLQMLCLDFNGFEGKIPSSIGNLSQNLKILLLTENQLTGDIPSEIGKLTSLTALSLQSNNLTGHIPDTIGDLQNLSVLSLAKNKLSGEIPQSMGKLEQLTILYLMENGLTGRIPATLDGCKYLLELNLSSNSFYGSIPYELFSISTLSIGLDLSNNQLTGNIPLEIGKLINLNSLSISNNRLSGEIPSTLGDCQYLQSLHLEANFLEGSIPRSFINLRGLIEMDLSQNNLTGEIPDFFGSFSSLMVLNLSFNDLNGKVPNGGVFENSSAVFMKGNDKLCASFPMFQLPLCVESQSKRKKVPYILAITVPVATIVLISLVCVSVILLKKRYEAIEHTNQPLKQLKNISYHDLFKATNGFSTANTIGSGRFGIVYRGHIESDVRTVAIKVFRLDQFGAPSNFIAECVALRNIRHRNLIRVISLCSTFDPTGNEFKALVLEHMVNGNLESWVHPKPYKKNPKETLSLVSRISIAVDIAAALEYLHNQCTPPLVHCDLKPSNVLLDDEMVAHVSDFGLAKFLHSDSSLASSTSYSIAGPRGSIGYIAPEYAMGCKISFEGDIYSYGIILLEMITGKYPTDEMFTDGMNLHKMVASAIPDKIGDIVEPSLTEDHLGEDKNYESVETPRFFMQLAKLGLRCTMTSPKDRPKIKDVYTEIVAIKNMLSALQY</aaseq>

Gene Sequence

<dnaseqindica>1..2878#3020..3384#ATGTTTCCTGTCCTGCATTCAGGTACTGATCGGGATGCCCTTCTCTGCCTCAAGTCTCAACTCTCTGATCCATCAGGAGCCTTAGTTTCCTGGAGAAATGAGTCTTCCACGTTCTGCAGTTGGCATGGAGTGACATGTAGCAGACAGAATGCATCTCAGGTTATCTCTCTGAACCTTGAATCGCTGAACCTCACAGGCCAAATATTTCCTTGCATTGCTCAGCTCAGCTTCCTAGCCAGAATTCACATGCCCAACAACCAGCTCAATGGGCACATTTCTCCTGACATTGGTCTTTTAACTAGACTTAGATACCTCAATCTTAGCATGAATTCCTTGAATGGAGTTATCCCATATGCCATATCGTCGTGCTCTCACCTCAAGGTCATCAGCCTACAGAACAACTCCCTCGAAGGTGAGATCCCACAAAGTCTTGCTCAATGTTCATTTCTTCAGCAAATCGTTCTTAGCAACAATAATCTTCAAGGAAGCATCCCTTCCAAGTTTGGTTTGCTTTCCAACCTTTCTGTCATATTGCTCTCCAGCAACAAACTAACTGGCATGATTCCTGAGCTTTTGGGAGGTAGTAAGTCTCTCACACAGGTGAATCTAAAAAACAATAGCATCAGTGGTGAAATCCCTCCGACTCTATTCAACAGCACAACTCTTTCTTACATAGATCTCTCACGCAATCACCTTTCCGGGTCTATCCCACCTTTCTCTCAAACCTCTTTACCGCTACGATTCCTTAGCCTTACTGAAAACAATCTGACGGGAGAGATTCCACCCTCAATCGGAAACATTTCTACGCTGTCATTCCTGCTTCTTACTCAAAATAATTTACAAGGGAGCATTCCAGATTCCTTAAGTAAACTTACCAATTTGAGAGTATTAAACCTGAAGTATAATAAATTATCAGGCACTGTTCCCCTAGCACTGTTCAATGTCTCATCTCTTACTAATCTTATTCTCAGTAATAACAAGCTTGTAGGGACAATTCCTGCCAACATAGGTGTAACTCTTCCAAACATCATAGAATTGATAATAGGAGGGAACCAATTTGAAGGCCAAATCCCTAATTCTCTGGCCAATTCCACAAACCTCCAAAATCTTGATATTCGAAGTAATTCATTCACCGGTGATATTCCTTCACTAGGACTCTTATCAAATTTGAAAATACTAGACCTCGGAACAAATAGACTTCAAGCTGGAGATTGGACATTCTTTTCCTCCTTAACAAACTGTACACAATTACAAATGTTGTGCTTGGATTTTAATGGTTTTGAGGGGAAAATACCTAGTTCCATTGGTAACCTTTCACAAAACTTGAAGATACTTCTCTTAACAGAAAACCAATTGACCGGTGATATACCTTCAGAGATAGGAAAGCTCACCAGCCTCACTGCCCTTTCATTGCAATCGAATAACCTCACAGGGCATATTCCTGACACAATTGGGGATCTTCAAAACCTATCTGTCCTAAGCTTAGCTAAGAACAAACTTTCTGGGGAAATCCCACAATCAATGGGGAAACTAGAGCAGCTAACTATCCTGTATTTAATGGAAAATGGATTAACTGGTCGTATCCCTGCTACTTTAGATGGTTGCAAATATTTGCTTGAACTAAACCTTTCCTCTAATAGCTTCTATGGAAGCATTCCATATGAGCTTTTTTCCATTTCCACACTTTCTATAGGCTTAGATTTGTCCAATAACCAACTTACTGGGAACATACCATTGGAGATTGGTAAATTGATCAACCTAAATTCACTCAGTATTTCAAACAACCGATTATCAGGAGAGATCCCTTCGACCCTTGGTGATTGCCAGTATTTGCAATCATTGCATTTGGAGGCAAATTTTCTAGAAGGAAGCATCCCAAGATCTTTCATCAACTTAAGAGGCCTCATCGAGATGGATCTTTCCCAAAATAACTTGACCGGTGAAATTCCTGATTTTTTTGGATCATTTAGCTCTTTAATGGTTCTCAATCTATCATTCAATGACCTTAATGGGAAAGTTCCAAATGGTGGTGTGTTTGAAAATTCTAGTGCTGTGTTCATGAAAGGAAATGATAAGTTGTGTGCAAGTTTTCCGATGTTTCAATTACCACTTTGTGTGGAATCACAATCTAAAAGGAAGAAGGTACCCTACATTTTGGCTATCACTGTTCCAGTTGCTACTATTGTTCTGATCAGCTTGGTATGTGTTAGCGTCATCCTTTTGAAGAAGAGATACGAGGCCATAGAACACACCAACCAACCATTGAAGCAGCTCAAGAATATCTCGTATCATGATTTATTTAAAGCAACAAATGGTTTCTCTACGGCAAACACTATTGGTTCGGGGAGATTTGGAATTGTATACAGAGGTCACATTGAGTCTGATGTGCGCACAGTTGCTATCAAGGTATTCAGACTTGACCAATTTGGAGCACCAAGTAATTTCATCGCTGAATGTGTGGCATTGAGAAACATCCGCCATCGAAATCTTATAAGAGTGATTAGCCTATGTTCAACCTTCGATCCAACTGGAAATGAATTTAAAGCACTTGTTCTTGAGCATATGGTCAATGGAAACCTAGAAAGCTGGGTCCATCCAAAACCATACAAAAAAAATCCAAAAGAAACATTGAGTTTAGTCTCAAGAATATCAATCGCCGTGGATATAGCAGCTGCATTAGAATATCTTCATAATCAATGTACTCCTCCTCTAGTTCATTGTGATCTTAAACCAAGCAATGTTCTTTTGGATGATGAAATGGTTGCTCATGTTAGTGACTTTGGGCTTGCAAAGTTTCTTCATAGCGACTCCTCACTAGCAAGCAGTACTTCATATAGCATTGCTGGACCAAGAGGATCAATTGGCTATATTGCACCAGGTCAGTACATACTATTCTAATTTTATTCATCCGTAATATAGTAGTACTATTTTCACATAAATGCTGCATAGCTATGTTTAGAATTTATAATCTGAGAACCAAATAGATTGATTTTTCATGATCCATTGCATAATATTGCAGAGTATGCCATGGGGTGCAAAATCTCATTTGAGGGTGACATCTACAGCTATGGAATTATTCTTCTAGAGATGATCACAGGAAAATATCCTACTGATGAGATGTTTACAGATGGCATGAACCTTCACAAAATGGTGGCGTCAGCAATTCCAGACAAAATTGGTGATATTGTGGAACCCAGTCTTACTGAAGATCATTTGGGTGAAGACAAAAATTACGAATCTGTAGAAACGCCAAGGTTTTTCATGCAATTGGCAAAACTAGGCCTCAGATGCACTATGACATCACCCAAGGATCGACCAAAAATCAAGGATGTTTACACTGAAATCGTAGCCATCAAAAACATGTTATCAGCACTGCAATATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033677