Os06g0470150

From RiceWiki
Revision as of 09:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0470150| Description = Protein of unknown function DUF563 family protein| Version = NM_001187856.1 GI:297724842 GeneID:9267972| Length = 20...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0470150

Description

Protein of unknown function DUF563 family protein

Version

NM_001187856.1 GI:297724842 GeneID:9267972

Length

2093 bp

Definition

Oryza sativa Japonica Group Os06g0470150, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:16478735..16480827

Sequence Coding Region

16478775..16478970,16479062..16479247,16479473..16480665

Expression

GEO Profiles:Os06g0470150

Genome Context

<gbrowseImage1> name=NC_008399:16478735..16480827 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:16478735..16480827 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgacggcgtacacgcggccgtccaagccaccagggccggccggagagcggaggcctccgcggctagccaaggagcttggcaggatcgagcccaagaagctcgggattgggctggtcgccggctgctgcctcgctctcctcacctacatctcctttgcccgccttttcgccatctactcgccggtcttcgagagcacgtccttggtgatgaagaacgcaccacctgcgtcgactcagcagaaccctgtgctggctcaacaacagagcaaagaagaggacgagaaagatgttggtgaagatgagacggaccggaaagtgccaagctttgcggagacgacagaaaagaatgaagaggaggaaacagtaacgaaaccatccggggacgaagctgaggccacaatctcctgcgatgagaacggcgttgatgagggcttcccatatgcgcggccaccggtctgcgagctcaccggcgatatccggatcagcccaaaggagaaaaccatgttcttcgtaaatccgtccagcgccggcgcgttcgacggcaacggggagaagaagatccgaccgtacgctcgcaaggacgacttcctcctcccgggcgtcgtggaggtcatcatcaagtcggtctcgtcgccggccatcgcgccggcctgcacgcggacccacaacgtcccggcggtggtcttctccgtggccggatacaccgacaacttcttccacgacaacacggacgtgatgatccctctgttcctaacgacgtcgcacctcgccggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagttcacgccgctcctgaagaagctctccaactacggggtgatcaacttcgacaaggacgacgaggtgcactgcttccggcgcggccacctcgggctgtaccgcgaccgcgacctcatcatctccccgcacccgacgcgaaacccgcgcaactactccatggtcgactacaacaggttcctccgccgcgcgttcggcctgccgcgggacagcccggcggtgctgggcgacaagaccggcgctaagcccaagatgctgatgatcgagaggaagggcacccgcaagctgctcaacctgcgcgacgtggccgcgctctgcgaggacctcgggtttgcggtgaccgtggcggaggccggcgcggacgtgcgcgggttcgccgagaaggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgacaaaccagatcttcctcccaacgggcgccgtgctcgtacagatcgtgccgtggggcaagatggactggatggccacaaacttctacgggcagccggcgcgcgacatgcggctccggtacgtcgagtattacgtctcggaggaggagacgacgctcaaggacaagtacccaagggaccactacgtgttcaaggaccccatggccatccacgcgcagggctggccggcgctcgccgagatcgtcatgaagcaggacgtcacggtgaatgtgacaagattcaagccgttcctgctcaaggcgctcgacgaattgcaggaatag</cdnaseq>

Protein Sequence

<aaseq>MSSTAYTRPSKPPGPAGERRPPRLAKELGRIEPKKLGIGLVAGC CLALLTYISFARLFAIYSPVFESTSLVMKNAPPASTQQNPVLAQQQSKEEDEKDVGED ETDRKVPSFAETTEKNEEEETVTKPSGDEAEATISCDENGVDEGFPYARPPVCELTGD IRISPKEKTMFFVNPSSAGAFDGNGEKKIRPYARKDDFLLPGVVEVIIKSVSSPAIAP ACTRTHNVPAVVFSVAGYTDNFFHDNTDVMIPLFLTTSHLAGEVQFLITNFKPWWVHK FTPLLKKLSNYGVINFDKDDEVHCFRRGHLGLYRDRDLIISPHPTRNPRNYSMVDYNR FLRRAFGLPRDSPAVLGDKTGAKPKMLMIERKGTRKLLNLRDVAALCEDLGFAVTVAE AGADVRGFAEKVNAADVLLAVHGAGLTNQIFLPTGAVLVQIVPWGKMDWMATNFYGQP ARDMRLRYVEYYVSEEETTLKDKYPRDHYVFKDPMAIHAQGWPALAEIVMKQDVTVNV TRFKPFLLKALDELQE</aaseq>

Gene Sequence

<dnaseqindica>41..236#328..513#739..1931#ggtacctctgggctaagcttctctcaggagtccttgcgtgatgtcgtcgacggcgtacacgcggccgtccaagccaccagggccggccggagagcggaggcctccgcggctagccaaggagcttggcaggatcgagcccaagaagctcgggattgggctggtcgccggctgctgcctcgctctcctcacctacatctcctttgcccgccttttcgccatctactcgccggtcttcggtgcgccacttaattatttcttgttctcttcgtgtgaaactctctttttttttcatacttactgctacaaatttttcgaaattcttgttagagagcacgtccttggtgatgaagaacgcaccacctgcgtcgactcagcagaaccctgtgctggctcaacaacagagcaaagaagaggacgagaaagatgttggtgaagatgagacggaccggaaagtgccaagctttgcggagacgacagaaaagaatgaagaggaggaaacagtaacgaaaccatgtgaggcttccttttttttatcgctgtttagcacctcgagtggaaaagaaaattgaacacagaacagttttaatactgacagcatctatctttcagaatccgatccccgcataaaaaagcgtagctctaattcggaattcggttctctcgtcttgtaatttcgttcatgtaggagtttcatccatagtagtactaattaagatgctttgtctgtgattccgacagccggggacgaagctgaggccacaatctcctgcgatgagaacggcgttgatgagggcttcccatatgcgcggccaccggtctgcgagctcaccggcgatatccggatcagcccaaaggagaaaaccatgttcttcgtaaatccgtccagcgccggcgcgttcgacggcaacggggagaagaagatccgaccgtacgctcgcaaggacgacttcctcctcccgggcgtcgtggaggtcatcatcaagtcggtctcgtcgccggccatcgcgccggcctgcacgcggacccacaacgtcccggcggtggtcttctccgtggccggatacaccgacaacttcttccacgacaacacggacgtgatgatccctctgttcctaacgacgtcgcacctcgccggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagttcacgccgctcctgaagaagctctccaactacggggtgatcaacttcgacaaggacgacgaggtgcactgcttccggcgcggccacctcgggctgtaccgcgaccgcgacctcatcatctccccgcacccgacgcgaaacccgcgcaactactccatggtcgactacaacaggttcctccgccgcgcgttcggcctgccgcgggacagcccggcggtgctgggcgacaagaccggcgctaagcccaagatgctgatgatcgagaggaagggcacccgcaagctgctcaacctgcgcgacgtggccgcgctctgcgaggacctcgggtttgcggtgaccgtggcggaggccggcgcggacgtgcgcgggttcgccgagaaggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgacaaaccagatcttcctcccaacgggcgccgtgctcgtacagatcgtgccgtggggcaagatggactggatggccacaaacttctacgggcagccggcgcgcgacatgcggctccggtacgtcgagtattacgtctcggaggaggagacgacgctcaaggacaagtacccaagggaccactacgtgttcaaggaccccatggccatccacgcgcagggctggccggcgctcgccgagatcgtcatgaagcaggacgtcacggtgaatgtgacaagattcaagccgttcctgctcaaggcgctcgacgaattgcaggaataggaggagcgccgtttgattggttttgtgtgggcgtggctcgtccataagtgggatgtaggatgttttgattttatatttatattgtaatattgagttaatcaatgtaatttatttcgttggagattcatggtgtttgtcattcagaaaaatatgatttcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0470150, RefSeq:Os06g0470150