Os06g0472700

From RiceWiki
Revision as of 09:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0472700| Description = Conserved hypothetical protein| Version = NM_001064159.1 GI:115468049 GeneID:4341022| Length = 4492 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0472700

Description

Conserved hypothetical protein

Version

NM_001064159.1 GI:115468049 GeneID:4341022

Length

4492 bp

Definition

Oryza sativa Japonica Group Os06g0472700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:16638135..16642626

Sequence Coding Region

16638350..16639383,16640075..16640102,16640182..16640240,16640324..16640342

Expression

GEO Profiles:Os06g0472700

Genome Context

<gbrowseImage1> name=NC_008399:16638135..16642626 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:16638135..16642626 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattcttttcaacatggcatggatgctgataaacaccacatttttggggagcgtggcaatatgattcagttaaatatgtgtgcatctgatggtcgttctgttgttggacaacgatgccagagacttgggtgtaacaatgttgttgaaggccagacattgctctgtaaaagtcacagtatagggcaacgatgccaaatgcttggctgccctcatattgtaccagatggctcagtattatgtatgtcccatggtggaggtcgcccgcttggtgaacctggttccagtacagtagcttgctccaaatcagaaatttcaatcaagtacgaaggagagagtgggttcagagtaacccaaaatgctgggaatgatctgggtagtgcaggaatctataatcctgatggtgatgttgtgatgtgcaagtaccagggttgcagcaagcgagcccagggaaatgcaatgtactgtaagattcaccgcggcggttcaaagggctgcatggttcaaggttgtacaaagggtgcacatgggggcacacctttatgcattgctcatggcggaggcaagcgctgcgctgtcactggatgccccaatgcagcatgtggcagcagtcaaggcctcactgaccgctgtgtaaggcatggtggtggaaggaggtgcaggtttgatggttgtgtgaagggtgcccaagggaacacagacttttgcattggacatggtgggggaagacgctgcaagtttgaaggatgtggtaagagtgcacaagggcggagtgattactgcatcaaacatggtggcggcaggcgctgcaagtttcaaggatgtgccacgagtgcaaaatggggcatggatttctgctctttgcacagaaagagcttgatgagcggcagcaattcttcccatgaaatgctgccagcgccaccgcccaagcgccgggccaagaagaccaagaccgcggttggtccatctggtctctccagtgaccccaaatcagcagagagtgtgatgattaagcatgcttccaatgcgggtcaccaacaacagccgatccactctatgaaatcctcgccgtcttctgggttaactgcttcaactgagggtgatgtggcggcgaggagccatgcattatttggactgtag</cdnaseq>

Protein Sequence

<aaseq>MDSFQHGMDADKHHIFGERGNMIQLNMCASDGRSVVGQRCQRLG CNNVVEGQTLLCKSHSIGQRCQMLGCPHIVPDGSVLCMSHGGGRPLGEPGSSTVACSK SEISIKYEGESGFRVTQNAGNDLGSAGIYNPDGDVVMCKYQGCSKRAQGNAMYCKIHR GGSKGCMVQGCTKGAHGGTPLCIAHGGGKRCAVTGCPNAACGSSQGLTDRCVRHGGGR RCRFDGCVKGAQGNTDFCIGHGGGRRCKFEGCGKSAQGRSDYCIKHGGGRRCKFQGCA TSAKWGMDFCSLHRKSLMSGSNSSHEMLPAPPPKRRAKKTKTAVGPSGLSSDPKSAES VMIKHASNAGHQQQPIHSMKSSPSSGLTASTEGDVAARSHALFGL</aaseq>

Gene Sequence

<dnaseqindica>3244..4277#2525..2552#2387..2445#2285..2303#aaagtccaaacttgccaagttcatccatcctccccttcccccctccgatcccctcccatcccctccccgccgcctcgtgcgatcgatcgatcgatcgatccgcaccacccacgcgcccgattcgccctcctacccaggccacctctaaccctagcgccggcggctcttctcccccgccgccaccgccgctccaaccctccccaacagtgggtttctctcccccccaatcccctcccctctaccgccgtcgatcgacgcgccaccaggaggggagcaggacgaaagccggtgctgcctaccgcctccgcaggtacctcatcgagcatcggtcggagtgcaaccggagtgccaaggtcagcgaacgcctttccccccttttaattctcctccttcctgtggtacatgattatagttaatcaaattgccttcttaatgtgtgcttttagctctacatttccgtggatctgaaacttgagctgttcaccgtgttgaattacacggtctgtgtaatttggtgtggtcatgtcatgcagcagagatttgtttcattagtctccactgtgatatacatgtgttcaagattagtactagattacatacatacctgcagcacgaatgtaaagtaaaaagaatcattaatcttgagcatgaatccgtacgttttggccctgaatagctagctcgtggagaagatagatagggaactagatcactgtgcacgtttagaggatttgcaggtctgattgtgctagaacaattttattttagtaatgttactacgttagacatgaattcggcttcttgttaaatgttgccttgaatagcagaaagttaatgtccaggaccttaaagttgacggcaatggtgtattcctaaacatttgtaactttgggtggtactccctccgttcacaattgattgtcatattaccaaaacagaaatatccatatttgatcgtcgcctaacgtcttgagccagcagatttccttttttttttattgctgcatgcgtgtatggattaaattgcgagagagtctcctgagatttactgcttagcatgcatgcatagatttaatgaagagtgattattgccgtattagttaaatccctccgtgattctggttggtctagctccatgcaccacacgcggaagccgaaccggcactgcggcagtctccttgatccacgctgctgttgtgtgatttatttctcccttggtattgctgcgcatacctaatatgatgatcaattgtgaatggagggagtattagagagtagcagtgacctcacttgggttctttctatgtcaccaaacttgtaaaaatcgattcttatgatctgtaaccctagcaaacagtgccactatggcaacaagagaatcgccactatagctcaagctagtctcgtacactgccgctggagatcgggaagctgaacctcggttgctaccatttcatctcgagctcctacaatctgttgttgatctcatccagctgccgcctgagattgggtcatcggagcttggctgcctgtgctagaactcagctcatccagccctggccgcagattgagctcaagctgctgccaccacacctatcttactacagcaaccgattcacgtgacaggtagatgatgtagaacgggggattgctgagggtaagaacgatggggttaaggataaaatgagaggagtgggtaagtgaaagaaatgataggtggagctgcactgtaagagagagtaatatagataaggaacaggactggcaccatgtcatcctccatgtagattgccacgttggtgaaactgtctccagaactgtcatagagggttatatcggactctttctctagatttaatgagctgccaacatttgatgactacattggagcttaaaatacagacatctgtgtttgattatagtgaggaataagtggagtgtaacctcctgtttcagatgatatgacgggaatgtctgctcccccccttttttctgattttacagcccagcaagtcatagccttaaaggttagaggaaaatgttatttacttgtggcatgcaaaccgaagtttatgtttttgagttttgactaatgttctttcaatctgtatccttacggtatttagtattttagtatttatggcaacaaatattaatgattggacatattgatcctttctcagcaaagggtattatttgaatagtctacaaataatttaattaattcttaagattaccttttttgttaatttaatttgttaaatgctccatgcaggtgtatttcatggattcttttcaacatggtatattctgcacaaccattttcacaactttcttatattataagctgatctatatggtagacctgaccatgtactttttctaggcatggatgctgataaacaccacatttttggggagcgtggcaatatgattcagttaaatgtaagctatcctctcccagttttctgctgtctagtctagcaagctttttctgacacttcctttatccttttgtctacagatgtgtgcatctgatggtcgttctgttggtatgtttttttttggaacctacctttccgtaccatgtatgcacttctttaaagactggctaaagcctggatgtttattatgggtaaaaatgaatagtagatatggtaatattgtttgaaatttatgaataagttctttctgttacgcctttcatgcttttgttacagagtgcttgacagtttttgctatactgtatttgtaaaattagctttcatgctacatataaatgtgactgtttggtcaccatatgccttagtaggacaacataacaaagaagaatatattttagggatattgtataatattgaagaacttcaagaagtatttcgtaaatcaatgttgtgcatagttgtttggatgacaaatgaactgctactacttccattgccttcttttaaaggagtacagataaagtctatttgaccatgatgaacagtagttgatacccaacggctggtggcattgctgaatgtagaagtagacatggtaaacagtctgttgggaacatagtgtaacaatgatttttcccatttaaatgcctttctggagtttacctattaaccataatgtagttgactgagaaataagtgtggagaagctttagttcttggataaatttgaatatgtttcaatatttgtctaatgcatacatctttcttgggtttttgtttttttgttcttattaagcagttggacaacgatgccagagacttgggtgtaacaatgttgttgaaggccagacattgctctgtaaaagtcacagtatagggcaacgatgccaaatgcttggctgccctcatattgtaccagatggctcagtattatgtatgtcccatggtggaggtcgcccgcttggtgaacctggttccagtacagtagcttgctccaaatcagaaatttcaatcaagtacgaaggagagagtgggttcagagtaacccaaaatgctgggaatgatctgggtagtgcaggaatctataatcctgatggtgatgttgtgatgtgcaagtaccagggttgcagcaagcgagcccagggaaatgcaatgtactgtaagattcaccgcggcggttcaaagggctgcatggttcaaggttgtacaaagggtgcacatgggggcacacctttatgcattgctcatggcggaggcaagcgctgcgctgtcactggatgccccaatgcagcatgtggcagcagtcaaggcctcactgaccgctgtgtaaggcatggtggtggaaggaggtgcaggtttgatggttgtgtgaagggtgcccaagggaacacagacttttgcattggacatggtgggggaagacgctgcaagtttgaaggatgtggtaagagtgcacaagggcggagtgattactgcatcaaacatggtggcggcaggcgctgcaagtttcaaggatgtgccacgagtgcaaaatggggcatggatttctgctctttgcacagaaagagcttgatgagcggcagcaattcttcccatgaaatgctgccagcgccaccgcccaagcgccgggccaagaagaccaagaccgcggttggtccatctggtctctccagtgaccccaaatcagcagagagtgtgatgattaagcatgcttccaatgcgggtcaccaacaacagccgatccactctatgaaatcctcgccgtcttctgggttaactgcttcaactgagggtgatgtggcggcgaggagccatgcattatttggactgtagataccttgttgatgcataagagtggtttcgcatagacttgttaactagggggattagctgtgaactgaagtgaagataaggatcataggagatccactttttatattaacatgctttcactgtcagttgacttgagtagaactgtgcattgtgttatctgcaaggattatcaacaaatttaaatctgcatagtacctatgtatgtggttctgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0472700, RefSeq:Os06g0472700