Os06g0474500

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Revision as of 09:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0474500| Description = Protein of unknown function DUF239, plant domain containing protein| Version = NM_001064167.1 GI:115468065 GeneID:434...")
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Gene Name

Os06g0474500

Description

Protein of unknown function DUF239, plant domain containing protein

Version

NM_001064167.1 GI:115468065 GeneID:4341031

Length

4275 bp

Definition

Oryza sativa Japonica Group Os06g0474500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:16768398..16772672

Sequence Coding Region

16768641..16769018,16769340..16769486,16769572..16769625,16769739..16769903,16771625..16771867
,16771957..16772043,16772142..16772372

Expression

GEO Profiles:Os06g0474500

Genome Context

<gbrowseImage1> name=NC_008399:16768398..16772672 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:16768398..16772672 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttgtagcttccactttgttcccttgctcctcctcctcaccttgctcttgctcatctcctctgccagtagaactgctgcattgccctccatgcgcagtagcagtgaagacaccgccagtaatgctactgctgctgcaaggcttaggccagggaaggagctgcttaagtacaagaggatcagggctctcctcaagaaactcaacaagccttctctcaagaccattcagagcccagatggtgatctcatagactgtgttccctctcatctccaacctgcatttgaccatccaaagctcaagggacaaaagcttctggacccaccggagaggcccaagaactacaacctcaccattgccgtcagcagcagcagcagcagtagagtaggtgaggtggtggtgcaggcctggcatgccgccggcgaggagtgcccggaagggacggtggcgatacgccggacgacggagaaggacctgctcagggccagctccctccggaggtacggcaggaagccggcacgccggaatattcgccgtgattccaccagcaacggccatgagcatgcagttggatatgtgaacaatgataattactatggggccaaagctagtgttaatgtgtggtcaccaaggataggtgacccatctgagttcagcctgtcacagatctgggttatctctggctccttcggcaatgatctgaacaccattgaagctggatggcaggtcagccctgagctgtatggagacagtaacccaaggttcttcacatattggacaaccgacgcatatcaagagaccggttgctacaaccacaactgccgtggatttgtccaaacgaccaacaagatcgcgatcggcgcggctatcacgccagaatcggtgtacaacggaaggcagtttgacattaccctgatgctatggaaggaccccaagcatgggcactggtggttagagctgggcccgggtatggtggtggggtattggccatcgtatctgttcacccacctggcgcaccacggcaacatggtgcagtttggcggcgaggtggtgaacacgcggccgtcggggtcgcacacggcgacgcagatggggagcggtcacttccccggcgaggggttcgaccgcgccgcctacttccgcaacctgcaggtggtggactgggacaacagcctcatcccggcggccaacctcaagctcctcgccgaccaccctgcctgctacgacatccagggaggctccaactcctactggggcagctacttctactacggcggccccggcaggaatgtcaaatgcccttga</cdnaseq>

Protein Sequence

<aaseq>MACSFHFVPLLLLLTLLLLISSASRTAALPSMRSSSEDTASNAT AAARLRPGKELLKYKRIRALLKKLNKPSLKTIQSPDGDLIDCVPSHLQPAFDHPKLKG QKLLDPPERPKNYNLTIAVSSSSSSRVGEVVVQAWHAAGEECPEGTVAIRRTTEKDLL RASSLRRYGRKPARRNIRRDSTSNGHEHAVGYVNNDNYYGAKASVNVWSPRIGDPSEF SLSQIWVISGSFGNDLNTIEAGWQVSPELYGDSNPRFFTYWTTDAYQETGCYNHNCRG FVQTTNKIAIGAAITPESVYNGRQFDITLMLWKDPKHGHWWLELGPGMVVGYWPSYLF THLAHHGNMVQFGGEVVNTRPSGSHTATQMGSGHFPGEGFDRAAYFRNLQVVDWDNSL IPAANLKLLADHPACYDIQGGSNSYWGSYFYYGGPGRNVKCP</aaseq>

Gene Sequence

<dnaseqindica>3655..4032#3187..3333#3048..3101#2770..2934#806..1048#630..716#301..531#gatagtactagtacaactacaaaccttgcttgcaagttgctgaatagtagtggagcagtggagcagcagcagtggcatataaacacacacacacagcagcaacagcagcctcctcctagctagatgctggtgaggcaaagttcagtgatcacttgcttcaaagggtgcagcagtgtaggagaggtgaggaggcacaggaagaagacaaccacatactattgccactctctcctgtgactgtgtgtgtgtgcgcgtgtgcgtgcttgctagatccagacaagctgtggaagcaaaaggaggatggcttgtagcttccactttgttcccttgctcctcctcctcaccttgctcttgctcatctcctctgccagtagaactgctgcattgccctccatgcgcagtagcagtgaagacaccgccagtaatgctactgctgctgcaaggcttaggccagggaaggagctgcttaagtacaagaggatcagggctctcctcaagaaactcaacaagccttctctcaagaccattcaggtcatcattgctaacttgtttgttatctttcttcttctttttttttcacactgaacatttacatctctagctaacttgtttgctgctgagatttgcagagcccagatggtgatctcatagactgtgttccctctcatctccaacctgcatttgaccatccaaagctcaagggacaaaagcttctggtaattaacacacccacgcgttctttcttctactatctttttgaaccaacattgtgatgatgaattttgtaacttgtgttctttcgcaggacccaccggagaggcccaagaactacaacctcaccattgccgtcagcagcagcagcagcagtagagtaggtgaggtggtggtgcaggcctggcatgccgccggcgaggagtgcccggaagggacggtggcgatacgccggacgacggagaaggacctgctcagggccagctccctccggaggtacggcaggaagccggcacgccggaatattcgccgtgattccaccagcaacggccatgaggttagccttgcacattactgtctcctcgcttcttgacaaaggaaaattttcaggatgagtaacagtgtaacactgtgaaagtaaaagctcttcatttaaagcagctaattttttttcacaagtcactaactaatgacttcgagttttaattcctaaaattattttttaaaaaaaagaaaagaaaagaaagtgaacatcgatatggttacactactgcaaatcctgaagacaaataaaccaagtcgtcccaggatgaaaaaaaaaaagcctgcagggatcaatatcattgtgaacccaaatctttccaagttgtcttgtaaaaaaaatgcaaggaacacatagaagttactccctgcagggattaattactaactaaagtgccaaacttgaaaacatacaaaagagaagcccatgcagtcggaataagatagcaacctgcatgaatctgcagaagcttcacttgggaaaaatccatatgagaaaattttactttgctactaggatcaatgctcggttttgttcatatctgtaggccgaaaatttcttagacccaagtggcatgctacagtacagatctactctgcttgaccgcacaacctgaccaatgaaatattcgtgtcagtgcagtggttagactcctgtttaggtgtctatcactacaggtttaagtggcagcatgtgcatcgcatcttgggttttgagtaataaagagtagtttccataatcggtggtttaagtaagatctctacatgtcaggcatcgatgcttgctgctaggtcaatgacaaagttctcgcatttctagagcaaattcatatagaggcctataatttaaacagagaagccaagtaattccaaagaaccatgcgtttacataacattaagtaatcacttccctgtgcagctaagctactgaaggttcggttaattggcctgttacaaggctagctatttgacttccctagttactattattacaatcaaacaaacatttttgttgtcaatagtgaaattgctaaacacgatgctcttaggaaatagtgctcaagcaatgtcttctgtaattcagtaattagcatccgtgttgcgatgacttcctgaaaaatttcgactcattgtcaggaccaagaaggctccctctgttttcatttcagtaaccaatctgtcgtgtgattctgtggccaagatagttaagtggacacttgaagtgaaatgctcatttcattttgtttatagattatgcgagtatctgtgtttaactcaagagcttgacgtttgttgaattgcataagaaaattcgatcaacagtagagtttgttggatggaaaagattctcgctttaactaattagtccgtagtacgtcgagtgagttcaccaagaagcttaattaatctctggggaagagatgctcaagagaaaacatagcaagaaaacccatgtggttcggagaaagaaaaatactaatatttgtacatgtgcagaagcttcattaagctaatccagatgagcaaatcaactcctcttgaagcatggactgtttgacccaaccatcaaattaacatttttcttgttttgtcttatatggacagcatttaatggccctactaacttactaagtagtctccctaagacaaagattggagctgccaatctggtcaaatctaaactgaacaccggttgaaatcaactttttaacatgcttctgctctggttaattacagcatgcagttggatatgtgaacaatgataattactatggggccaaagctagtgttaatgtgtggtcaccaaggataggtgacccatctgagttcagcctgtcacagatctgggttatctctggctccttcggcaatgatctgaacaccattgaagctggatggcaggtacatgaacggaggaattagattctgccatcttaaacaaaaagtgatgaataattatatgtactattttgaacgagcacttgtaatttatttttcttttgctccttctgcaggtcagccctgagctgtatggagacagtaacccaaggttcttcacatattggacagtaagtgtgactgctacaaactgtcacaaaaaattttgtgtttttcaaggtagaatttgaagtaatttgtacatacaattttcagaccgacgcatatcaagagaccggttgctacaaccacaactgccgtggatttgtccaaacgaccaacaagatcgcgatcggcgcggctatcacgccagaatcggtgtacaacggaaggcagtttgacattaccctgatgctatggaaggtaactcttttatccatttcttgataactgcattagcatatgcaagaattttggtatactgaagcagctaacttcaacaaaaatgatttctgcaccaatccttttcagtttcactagggcacatatgttccattcgtcccataatataaatgattttaaatagatgtgacacatcccagtacaataaatatggatatttgtgctaggatttgtcatattcacctaaaattccttatattataggatggagggggtatatagtttgtcgtgaagaggtcaaaaatgtaatcacatttgaaaaaaaaagtattattttttcaggaccccaagcatgggcactggtggttagagctgggcccgggtatggtggtggggtattggccatcgtatctgttcacccacctggcgcaccacggcaacatggtgcagtttggcggcgaggtggtgaacacgcggccgtcggggtcgcacacggcgacgcagatggggagcggtcacttccccggcgaggggttcgaccgcgccgcctacttccgcaacctgcaggtggtggactgggacaacagcctcatcccggcggccaacctcaagctcctcgccgaccaccctgcctgctacgacatccagggaggctccaactcctactggggcagctacttctactacggcggccccggcaggaatgtcaaatgcccttgaaaggatctcgctctctccatctcttgttgcttgatggccggtcactcttgtttttctttttttgttcgtttgtttgtttgttttctttcttctgtgttcttctttgtgatagagattggttagtgcattaatgctaggatattactctatttgttaggtcttagcttgagctgctgaatgcatatgggagcaattaaattgagagggatttgtaaatttgagaagcaccttgattttgggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0474500, RefSeq:Os06g0474500