Os06g0479300

From RiceWiki
Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0479300| Description = Reverse transcriptase, RNA-dependent DNA polymerase family protein| Version = NM_001064182.1 GI:115468095 GeneID:4341...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0479300

Description

Reverse transcriptase, RNA-dependent DNA polymerase family protein

Version

NM_001064182.1 GI:115468095 GeneID:4341047

Length

1953 bp

Definition

Oryza sativa Japonica Group Os06g0479300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17112166..17114118

Sequence Coding Region

17112208..17112671,17113350

Expression

GEO Profiles:Os06g0479300

Genome Context

<gbrowseImage1> name=NC_008399:17112166..17114118 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17112166..17114118 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gattttgctgagactatgcgcagggaatttgagatgagcatgatggatgagttatcgtactttttgggattgcaaattaagcaaacacctcaaggtacttttgtgcatcaaacgaagtatacgaatgatcttttgagacggttcaagatggagaattgcaagcaaatttctacacctattggttctacagctgtgttggatcctgatgaagatgaagctgttgatcaaaaggagtatagaagtatgattggatctttgttgtatctaactgcttctaggccagacatagaatttgctgtgtgtttgtgtgcgtgctttcaagcttctcctcgtgcttcacatagtcaagcggtcaaccgaataatgaggtatttgaatcatacacttgagtttggaatttggtattctacttcatcttctatatgcttaagtggatattcagatgctgattttggaggttgttga</cdnaseq>

Protein Sequence

<aaseq>DFAETMRREFEMSMMDELSYFLGLQIKQTPQGTFVHQTKYTNDL LRRFKMENCKQISTPIGSTAVLDPDEDEAVDQKEYRSMIGSLLYLTASRPDIEFAVCL CACFQASPRASHSQAVNRIMRYLNHTLEFGIWYSTSSSICLSGYSDADFGGC</aaseq>

Gene Sequence

<dnaseqindica>1448..1911#17114119..17097006#tcgtgttcctcaacaaaacggtgttgttgaaaggaaaaatcgtgttttggttgagatggctagaacgatgttggatgaatataaaactcctagaaaattttgggctgaggctattaacactgcttgttatatttcaaatcgggttttcttgagatctaaacttggaaaaacttcttatgaacttcgatttggtcatcaacccaaagtttcacatttgcgtgtttttggttgcaagtgctttgtcttgaaatctagaaatttggataagtttgaggcacgttctaccgatggattgtttcttggttaccccgcacatactcgtgactatcgtgtacttattttggggactaacaaaatcgtggagacttgtgaagtttcttttgatgaggctagtcccggtactagacatgaaatcgcaggtacactgtcacaggttcaggaggaggatggtcgtatttttgaagacgagagcgactacgacgacgacaacgaggtcggctcggccggtcagaccgggcgccaggccggtcagaccgccggcacacctccggtcaaaccggcgcatgacgtgcggtcagaccggccagggtcgtcggctgagggatctgttgatgctgatcgagatggtcctccggagattacaacttcgaccagtacggatacagaacgtggatcaacttcagaagttgctgctcctttgcacattcaacgacgacatccaccggaacaaattattggtaatataggtgagcggactacaaggtctaaggtaaggactcatgatgtttgtgcaaattctgcatgtgttgcttcttttgaacccaaagatgtgtcacatgcattaactgatgaatcgtggattaacgccatgcatgaagaacttgaaaattttgagagaaataaagtttggactttagttgaaccaccttctggacataacattattggaaccaagtgggttttcaaaaataaacaaaatgaggatggtttgattgtgagaaataaagctagacttgttgctcaaggttttactcaagttgagggtttggattttgatgaaacttttgctcctgttactagaattgaggcaattagacttttgttggctttgctgcttcaaaaggttttaatttgtatcaaatggatgtgaaaagtgcttttctaaatggttttatacaggagaaagtttatgtcaaacaaccaccaggttttgaaaatcctgatttttccaaccatgtttttaaattgtctaaagctttgtatggtttgaaacaagctcctagggcatgatatgataggcttaagaactttttgcttgcgaaaggttttataatgggaaaggttgacaaaacgctttttgttcttaagcatggtgataatcaactgttcgttcagatttatgtggatgatatcatctttggttgtttgactcacgctttggttgtagattttgctgagactatgcgcagggaatttgagatgagcatgatggatgagttatcgtactttttgggattgcaaattaagcaaacacctcaaggtacttttgtgcatcaaacgaagtatacgaatgatcttttgagacggttcaagatggagaattgcaagcaaatttctacacctattggttctacagctgtgttggatcctgatgaagatgaagctgttgatcaaaaggagtatagaagtatgattggatctttgttgtatctaactgcttctaggccagacatagaatttgctgtgtgtttgtgtgcgtgctttcaagcttctcctcgtgcttcacatagtcaagcggtcaaccgaataatgaggtatttgaatcatacacttgagtttggaatttggtattctacttcatcttctatatgcttaagtggatattcagatgctgattttggaggttgttgaattgataggaaaagtactagtggaacatgtcattttcttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0479300, RefSeq:Os06g0479300