Os06g0485100

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Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0485100| Description = Conserved hypothetical protein| Version = NM_001064197.1 GI:115468125 GeneID:4341065| Length = 5239 bp| Definition ...")
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Gene Name

Os06g0485100

Description

Conserved hypothetical protein

Version

NM_001064197.1 GI:115468125 GeneID:4341065

Length

5239 bp

Definition

Oryza sativa Japonica Group Os06g0485100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17415110..17420348

Sequence Coding Region

17415606..17415986,17416552..17416671,17417076..17417219,17417640..17417699

Expression

GEO Profiles:Os06g0485100

Genome Context

<gbrowseImage1> name=NC_008399:17415110..17420348 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17415110..17420348 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcaggtatgatgttgctgccttcctgtctcatcggttgttcgaatctggtgatccagaagtacgagttcgcttttctggatttggagccgaggaagatgaatggataaatgtccgtaaatgtgtgcggcaacgttctcttccgtgtgaatcaactgaatgtgttgctgttcttcctggagacctcatactttgctttcaggaaggcaaagagcaggctctgtatttcgatgcttgtgtccttgatgctcaaaggcgtagacatgatgtacgagggtgtcgctgtagatttcttgttcgctacgatcatgatcactctgaggaaattgttccactgaggaaggtatgtcgccgaccagaaactgactacaggcttcagattctgcatgctgctagagcagcaggtatggctaaagaggctgtggttgatttggtgtcgcacaatgataagagctcagcggagcagaaacccccaaagcagcacaaaatgatggatgtgaacactgatgaggtaaccatggtttctaaccaagaccaagaagagccaacaggcaagcctgctgctaccttgccagcagcaccggtcaaaaccctgaatgattcagcttcagcttcagcttcagatgtccaaatgggcgaggcacaggctgctccaaaagttgaatcttctgatgaagtagaagacaagatgaaagagggatag</cdnaseq>

Protein Sequence

<aaseq>MCRYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVR QRSLPCESTECVAVLPGDLILCFQEGKEQALYFDACVLDAQRRRHDVRGCRCRFLVRY DHDHSEEIVPLRKVCRRPETDYRLQILHAARAAGMAKEAVVDLVSHNDKSSAEQKPPK QHKMMDVNTDEVTMVSNQDQEEPTGKPAATLPAAPVKTLNDSASASASDVQMGEAQAA PKVESSDEVEDKMKEG</aaseq>

Gene Sequence

<dnaseqindica>4363..4743#3678..3797#3130..3273#2650..2709#gcctgcctgcctgcctgcctgaacgaggaatcgctcatcgctgcatcactggtaacgtctatctctcctctcgctcgctcgcttcctctccgattcccccatggaatcatggatccatccaactaatcccctcccctcgcagccgcagacgccggcgtggtcgggatggggcggccgccgagcacggggggcccggcgttccggttcacccaggcggaggtggccgagatggaggcccgcctgcagcagctcaacaacgccatcccgcaccgctccgtcatccaggccctcgccgacaagttcacctcctcccccgcccgctccggcaaggtcgccgtccagcccaagcaggttaccattagggttttcctcccccctcctccttcctcttccccctccctggcggggaattcgccgcctcatctcgatccggccgcactcgcaggtgtggaactggttccagaaccggaggtactcgcaccgctccaggagctccaggggccccccgacgctgatgcagaccaagatgctgcccacggggtccgacgagcacaagtcgcctcccttcagggctatgccctctgcctctgcgcactccggctcgccctcaggtcatttgctcatgttactcttgctattaggagtaggtagtggtatatctccggtttcaacaattttataatggcaccgttccgactagacgaatagtaatggtatttttcaaaacaggcaaatttataatgtcatggatccaattaaccctataagtaatgagatacttcggccatatgtcagatccgtgtattggttctatgttagtaaccttccatctatgcatcatgatcattgtttatcattcctttttatcctctgattgttgatctttggtgttcaaaatcagggaagggttctttggagagcggccaggttgaatttgaagcaaagtcggctagagatggcgcatggtatccatgttacttctatgtcttttgtcttttgatttccatgtacgagtaggttcatggcgttttgcttgctgtttgacacatagttatcagacttggaccaaactagtggtctgactggaataaactgaacctaaagttctggcttgatcagcccgtctaattggattgtttcccatattggcctgcaaatcatagctgaactgaccagttttcctacagcctggtggggttaactatgacacagcccatttattcagtaaaattcaaaaatagcatggacaacagtaaacctccagatgcacctgtgttattggttaacattgtaagtgagaaatataagttctattaaccttgcctgcacagatcacaaattgatagctttcttattataaaatagagcatgtggtttgactgatggccgaatgatccatctgtgactgagtgattcacaggtcatatcttgcaatttagtatttcactgttttggatggttttctttgttctgtattctttataatatgctctatactgagtttaagtttaacgattgcttcttaatcaccattctaacttctaagcagcatacttgtttgttatataggtttgtatctcagttttgctgactttattatgaagagaattgcttgctatagaattgtcagatactgttaaattaggtttcagttttctttattgatctgtgttttttttttatgtttgtgttcatatctacaaagttgaatacaagaccccatttggatgccagaactgaggctagaaaaggggaattagaattggatctctcaattccgtcgttggttgctcttctgatttggagttgtaggccatttccgactgaatcggtggacaactaaattggtcctccaccaattcagagcactatgattggagctttcactggatctttcactggtgaccattcaccaatttcttgtgccactatcactgtttcacggtctattttctagacctacagctgccatcccttctttcaccactccagtggccatttccttcttccttaactctagcagtcatccttcatctttctcaactctggttgtcagcgtccctgacaaaatctgctgttaagctgtctacttccctagtagccgctgtggccattgattgctctggtcagcacaccagtgatgctccagccaccacttcggcaactacccaagaaggaacatcaggcctcctggtttgtttgtttgcttccaatgtgccaattcatttgcgtattgcatccaaccttaaactggatatttattgagaggtcatttctatttgagatgcctttggcaaccaatcacaatgaaaataattgagatgacaattcgaattcaatttggatttgaattgaagatccaactaaattcattcaacccaatgtagaggggaactggttacgcaagatctcttttaacatctgattaagtatatcagcattcttatggtctgtcattcatataagttcacttctatggtagtggtagccatcctaaacaaatgtatatttgtgctcaacgaatattgtgcctgatcattaactacaaatgcaaatgaatcaacgagttcagatactttctacactatgttcttgaaaaattgtaatctctgtgtttttacatttttttttgtgtataactaagcttttatgtgcaggtatgatgttgctgccttcctgtctcatcggttgttcgaatctggtgatccagtaaggatcatagtttttttattagatataatttatgttgctaaatgcatgtctggctttctttattgaaagcactttgctagctttgaacctgtagctgattcgatttatatcatttatcttaatgcggttgcatactcaatcctttttctttaattattttttaaaaacaagtttctactgcattattggtgttctagtatgactttcagaacattctgtattttttaaaaaaatctggcttatatctaaaattggcactacagttgaataatttttttccaacatatgccaatatgacatgcctgcgttgttgtgccggtatttttataaaactgtgtatacacaatgacatttattcctagttacaacatgtggtataaataatttgtctcacatgagcaattcttaatattttaggaagtacgagttcgcttttctggatttggagccgaggaagatgaatggataaatgtccgtaaatgtgtgcggcaacgttctcttccgtgtgaatcaactgaatgtgttgctgttcttcctggagacctcatactttgctttcaggtcttgccatcttagacatcttttcttgacctatgtactgtatctacatgtcacagattcagaattgatgtgtagttgaattcaaaattttaattttaagttagaagattgatttctgtttgttctgttctaaaaaaatgtatcacagattttccttaaaacatggccaaaaaaagtcatgcatatttgatacttgatgcacaaaacaccaaggggtgtaaaactgtaaaccagtaattgaacacacatttaggttcctgctttttaaataaagaaatctaaacataaatatatgttcttcgatgattatcttgatgaaatgctatttataattatgattaggtatcacatttactcaaattgttgtctaacatgaacaaatacatctgtcctaaattgaccaggaaggcaaagagcaggctctgtatttcgatgcttgtgtccttgatgctcaaaggcgtagacatgatgtacgagggtgtcgctgtagatttcttgttcgctacgatcatgatcactctgaggtattttactcactgcattcacccgttgaatgttgtgtgactattgtagtaatgcatgctctaagaatctaatttattctcttacattatggctttaatgatatacttcataagtaaagcgtcgttgtttaagttcctgaacttgcatacgcaattccatcaacgctttactgtgcaagtttaacgaccttatgcatatgatattagcttgtgcacgttatacccgtgagtaccatatgttgtagcatcatcctataggttcctgtagaagtttaagcaatttttatttatgctctagatgtggaattttaaggacaccatgcaaatttatattcatcatctctgaaaatttaagtatgcatgcatagattttccaagttcatatgatattagcccatgcatcctgctgtcttgcgcctttcttattttttattgccgaactacctaaaataatgtattttaccgggcttttgctagttatttcactttgttgaataaaactaaaaccttattgtgttttactctgattcgtttacaatcattaaaattccatttaaaatgacaggaaattgttccactgaggaaggtatgtcgccgaccagaaactgactacaggcttcagattctgcatgctgctagagcagcaggtatggctaaagaggctgtggttgatttggtgtcgcacaatgataagagctcagcggagcagaaacccccaaagcagcacaaaatgatggatgtgaacactgatgaggtaaccatggtttctaaccaagaccaagaagagccaacaggcaagcctgctgctaccttgccagcagcaccggtcaaaaccctgaatgattcagcttcagcttcagcttcagatgtccaaatgggcgaggcacaggctgctccaaaagttgaatcttctgatgaagtagaagacaagatgaaagagggatagttggttgcctttgctgagcattatgtttggctggcggctgcagtaaacagcatctggttaaatgcattggcatctgatcacctgttctcctgctaggctgctacacacatgttgtgacttccaacgcaggaatgtatgtcttcagtcttcacaacacatgttgtgacttgtgaagatttagtaattgcttaggaaccctctcaaaagggtaaatatgattgttaggaactttagctccaaacataaattgattgcataggaactttagctccgaagaaaatgtaatgtggttgcggtgggattgacttgattgctgtcacacaaattcggccgaggatccgtgttgaccacaaataggactggcctgccatgccacaactaggatctgtgtttaatatagcgtgccaaataggtgtgaatcggtgcctttgaaggttatcatcaattgttctgaaggtaaaatttctcaggagaaagtctaatatacattcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0485100, RefSeq:Os06g0485100