Os06g0486000

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Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0486000| Description = Protein kinase-like domain containing protein| Version = NM_001064198.1 GI:115468127 GeneID:4341066| Length = 3740 b...")
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Gene Name

Os06g0486000

Description

Protein kinase-like domain containing protein

Version

NM_001064198.1 GI:115468127 GeneID:4341066

Length

3740 bp

Definition

Oryza sativa Japonica Group Os06g0486000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17456210..17459949

Sequence Coding Region

17456481..17456855,17457262..17457486,17457580..17457650,17457760..17457846,17458206..17458682
,17458785..17459796

Expression

GEO Profiles:Os06g0486000

Genome Context

<gbrowseImage1> name=NC_008399:17456210..17459949 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17456210..17459949 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcatcggaatcggatcaagccccctcgccaagctcgccctcgtcgtcgtcgtcgtcgtcgtcaggaaatggttccaacaaggcgcctccgccggaagagtctgataattcgagcagcaatgggtcgtcgtcgtctagcccgacacctccttcgtcgcagagctccgactccgactccggaggaggctcgagttcgccgtcacaaggctcgtcctcgcctagcccgcctccgccgtcggggagctcttccgagtcgcattcgtctccaccgccggcgccgccccagtcttcttcttcttcttcttcttcttcttcgagtggtggaggttccaagtcttcgccggaggcaccgtctccgccatccgagtcatctggaaatggtggcggtggcggcggcggcggccgctcctcgccgccgccaaactggtcgccccctccgcagcagcagcagcagcaccagtccggaggctcaactccatcacctcctccgtctccgtcctctaaccagccaccgccatcgagtggctcgtcagcgtcatcgtcggaaccatctccgcctcgctcatcgccgccgccatcgccgccgcaatcaagtggcggcaataatggccaaccgcctaaaccttccggcgggcagcagcaagctcctccgcagtcacctccgtcggcggcgaaccagtcggtggtgttcattcccgtcccggtggcgtcgaacagccctcccggaatgctgccgccaccgcaggtgatcgacgccacgccctccggcgccatctcgtcgaccaacttccccggaggaagaaacagcacggcgggctcctccaacacttcattgtcacagcagcaacacacaaccgtaagctcgacggcccaggccagcagcagcggccacatagccgccgccatcgccggcgccgcggtcacgggcctcctgtgtgccatagtggccatctacctcatcgtgtcgagccggaggaagaagaagatggatgggctggtctaccactacgatggcaacaactacttcgtgccatcgtctcagtttggcgggtcaagccgcaaccaccacccaccaccgtcggcgattatgctcaactccggtggggcgtcagcggacggcggcgggtactacaattcggggacattctcgggcggagaggggacagggccggcggggtccaagtcgcggttcagctacgaggagctgacggggatcaccagcaacttctcgcgggacaacgtgatcggcgagggcgggtttgggtgcgtgtacaaggggtggctaagcgacggcaagtgcgtggccgtgaagcagctcaaggccgggagcgggcagggggagcgggagttccaggcggaggtggagatcatcagccgcgtccaccaccgccacctcgtctccctcgtcggctactgcatcgccgcgcaccaccgcatgctcatctacgagttcgttcccaacggcaccctcgaacaccaccttcatggccgtggcatgccagtgatggactggccgacgaggctgcggattgccattggtgcagccaaggggctagcatacctacacgaggactgccacccgcggattatccaccgggacatcaagaccgccaatatcctactggactactcgtgggaagcacaggtggcagactttgggcttgcgaagctggcgaatgatacgcacactcacgtgtcgacgcgcatcatgggcaccttcgggtacctagcgccagagtacgcctccagcggcaagctcacggaccgctccgacgtcttctcctttggtgtcgtcctactggagctcatcaccggccgcaagccggttgaccagacgcagcccctcggagaggagagcctcgtcgaatgggcacgaccagtgctggcggatgcggtagagacgggtgatctcagtgagctggttgatccacggctagagggcgcatacaaccgcaatgagatgatgacgatggtggaagcagcggccgcatgtgttcgccactccgctcccaaacggccgcggatggtgcaggtgatgcgggtactagatgaggggagcatgacggaccttagcaatgggatcaaggtggggcagagccaagtgttcactggtggcagcgacgctgctgacatccagcaactccgtcgtatcgcattcgcctccgaggagttcaccggagagtttgagcagagaacaaccaactccaactctgagtcgcggccgatgaatcggataccagagtaa</cdnaseq>

Protein Sequence

<aaseq>MSSESDQAPSPSSPSSSSSSSSGNGSNKAPPPEESDNSSSNGSS SSSPTPPSSQSSDSDSGGGSSSPSQGSSSPSPPPPSGSSSESHSSPPPAPPQSSSSSS SSSSSGGGSKSSPEAPSPPSESSGNGGGGGGGGRSSPPPNWSPPPQQQQQHQSGGSTP SPPPSPSSNQPPPSSGSSASSSEPSPPRSSPPPSPPQSSGGNNGQPPKPSGGQQQAPP QSPPSAANQSVVFIPVPVASNSPPGMLPPPQVIDATPSGAISSTNFPGGRNSTAGSSN TSLSQQQHTTVSSTAQASSSGHIAAAIAGAAVTGLLCAIVAIYLIVSSRRKKKMDGLV YHYDGNNYFVPSSQFGGSSRNHHPPPSAIMLNSGGASADGGGYYNSGTFSGGEGTGPA GSKSRFSYEELTGITSNFSRDNVIGEGGFGCVYKGWLSDGKCVAVKQLKAGSGQGERE FQAEVEIISRVHHRHLVSLVGYCIAAHHRMLIYEFVPNGTLEHHLHGRGMPVMDWPTR LRIAIGAAKGLAYLHEDCHPRIIHRDIKTANILLDYSWEAQVADFGLAKLANDTHTHV STRIMGTFGYLAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDQTQPLGEESLVEW ARPVLADAVETGDLSELVDPRLEGAYNRNEMMTMVEAAAACVRHSAPKRPRMVQVMRV LDEGSMTDLSNGIKVGQSQVFTGGSDAADIQQLRRIAFASEEFTGEFEQRTTNSNSES RPMNRIPE</aaseq>

Gene Sequence

<dnaseqindica>3095..3469#2464..2688#2300..2370#2104..2190#1268..1744#154..1165#gatagattgcaaaagctagctgtctgggagatggtggtggatgaagggatgtgctgctagcagaaatggtgatcgggagcaaatgtgggttgatgattctcgtaccagaagcattgtttgatacgattttgatcagctggcgggagaggaaacatgtcatcggaatcggatcaagccccctcgccaagctcgccctcgtcgtcgtcgtcgtcgtcgtcaggaaatggttccaacaaggcgcctccgccggaagagtctgataattcgagcagcaatgggtcgtcgtcgtctagcccgacacctccttcgtcgcagagctccgactccgactccggaggaggctcgagttcgccgtcacaaggctcgtcctcgcctagcccgcctccgccgtcggggagctcttccgagtcgcattcgtctccaccgccggcgccgccccagtcttcttcttcttcttcttcttcttcttcgagtggtggaggttccaagtcttcgccggaggcaccgtctccgccatccgagtcatctggaaatggtggcggtggcggcggcggcggccgctcctcgccgccgccaaactggtcgccccctccgcagcagcagcagcagcaccagtccggaggctcaactccatcacctcctccgtctccgtcctctaaccagccaccgccatcgagtggctcgtcagcgtcatcgtcggaaccatctccgcctcgctcatcgccgccgccatcgccgccgcaatcaagtggcggcaataatggccaaccgcctaaaccttccggcgggcagcagcaagctcctccgcagtcacctccgtcggcggcgaaccagtcggtggtgttcattcccgtcccggtggcgtcgaacagccctcccggaatgctgccgccaccgcaggtgatcgacgccacgccctccggcgccatctcgtcgaccaacttccccggaggaagaaacagcacggcgggctcctccaacacttcattgtcacagcagcaacacacaaccgtaagctcgacggcccaggccagcagcagcggccacatagccgccgccatcgccggcgccgcggtcacgggcctcctgtgtgccatagtggccatctacctcatcgtgtcgagccggaggaagaagaagatggatgggctggtctaccactacggtatatatgcaatgcagtgcaactatatatgcaaaagcacaagaaattgtgaactatatatcgcagctaaattaacaacggtgatcggatgatcggatgcagatggcaacaactacttcgtgccatcgtctcagtttggcgggtcaagccgcaaccaccacccaccaccgtcggcgattatgctcaactccggtggggcgtcagcggacggcggcgggtactacaattcggggacattctcgggcggagaggggacagggccggcggggtccaagtcgcggttcagctacgaggagctgacggggatcaccagcaacttctcgcgggacaacgtgatcggcgagggcgggtttgggtgcgtgtacaaggggtggctaagcgacggcaagtgcgtggccgtgaagcagctcaaggccgggagcgggcagggggagcgggagttccaggcggaggtggagatcatcagccgcgtccaccaccgccacctcgtctccctcgtcggctactgcatcgccgcgcaccaccgcatgctcatctacgagttcgttcccaacggcaccctcgaacaccaccttcatggtaagtaattaattaatcaattcataacactagtacacaaactttaataggtttcagttggaaaccggcgccggtttttcagccgacacctatactcccggacataggtgccggtgttttacagccagtgtttgcactctgttcgaagttttgggaatttcagcctgcggcatgacactatttcaccactaatattttgtgaaaaaaatatatttttttgtcatttagaaaaaaaatggttaaaatttattcaaatttcaaaaaaaataaaaaattccggtgccccttgacgtaaatatgcaaaacaaaattagaaaccatgtttgcagcttacaactaattaatgtccttctatgtaggccgtggcatgccagtgatggactggccgacgaggctgcggattgccattggtgcagccaaggggctagcatacctacacgaggactgtaagtttaatgatccacattgacgctcatcgatctatcttatatgctgttacacatcacctagctaacactggaaaaaaggcgttttgttctctccttggcaagataggccacccgcggattatccaccgggacatcaagaccgccaatatcctactggactactcgtgggaagcacaggtacgcatatacagtacatcgatctccccagccagctgccatcttcaattcaaagttccatggtgtttgatgcttccatccatggtggcgcaggtggcagactttgggcttgcgaagctggcgaatgatacgcacactcacgtgtcgacgcgcatcatgggcaccttcgggtacctagcgccagagtacgcctccagcggcaagctcacggaccgctccgacgtcttctcctttggtgtcgtcctactggagctcatcaccggccgcaagccggttgaccagacgcagcccctcggagaggagagcctcgtcgaatgggtatgttttgatcgtcgaggggacgttctaccattaaaatagatataaaaaagtctcaaaaactttcacaacatttatacaatatatatatatataccactccacgaaatcttaattagatctaaacccaactcacacattgagatgtttttccctcaatgtgtaggacaaatttgaacttaatttttggtagagtgatagatgtcattatattttacattgtcaatttctttttaaaatttttataactaattgcatttagtttggaaaaaaggtacacgagagaacatcctctcgagggattagaattattttccgtatctcctcctacccccacccgccaccgcactttcgatttaaaatttgtcttttttgccttatatacaacgccatctcttctttgcaggcacgaccagtgctggcggatgcggtagagacgggtgatctcagtgagctggttgatccacggctagagggcgcatacaaccgcaatgagatgatgacgatggtggaagcagcggccgcatgtgttcgccactccgctcccaaacggccgcggatggtgcaggtgatgcgggtactagatgaggggagcatgacggaccttagcaatgggatcaaggtggggcagagccaagtgttcactggtggcagcgacgctgctgacatccagcaactccgtcgtatcgcattcgcctccgaggagttcaccggagagtttgagcagagaacaaccaactccaactctgagtcgcggccgatgaatcggataccagagtaataacgccttgtatgttttgaagtgcttagcaccggtgcaattacgtgataagggtgacaacaagaggtgagtccatatagaactgaactgaactcaaaaacacatgtaggaaattcagggttttgggtctaattttcggcagtttgtacttatgtacttcaaaacccttttgcacatggaggacattcaatcaagtgataaagatatagggaaatcagtctattaggatccataatggtttgctaagcacataccatcagcatgatgattt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0486000, RefSeq:Os06g0486000