Os06g0486300

From RiceWiki
Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0486300| Description = Similar to Mlo| Version = NM_001064199.1 GI:115468129 GeneID:4341067| Length = 5277 bp| Definition = Oryza sativa J...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0486300

Description

Similar to Mlo

Version

NM_001064199.1 GI:115468129 GeneID:4341067

Length

5277 bp

Definition

Oryza sativa Japonica Group Os06g0486300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17470799..17476075

Sequence Coding Region

17470799..17470924,17471064..17471121,17473040..17473236,17473323..17473439,17473584..17473644
,17473750..17473838,17473955..17474029,17474139..17474227,17474350..17474399
,17474504..17474544,17474673..17474846,17475151..17475279,17475695..17476075

Expression

GEO Profiles:Os06g0486300

Genome Context

<gbrowseImage1> name=NC_008399:17470799..17476075 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17470799..17476075 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaggtgggagatcgggatcgcgggagttgccggagacgccgacgtgggcggtggccgtcgtctgcgccgtcctcgtgctcgtctccgtcgccatggagcacggcctccacaacctcagccattggttccgtaggcggcagaagaaggccatgggcgacgccctcgacaagatcaaagcagagctgatgctgctgggcttcatatccctgcttctcaccgtggcacaggcgcccatctccaagatctgcatccccaagtcggctgccaacatcttgttgccgtgcaaggcaggccaagatgccatcgaagaagaagcagcaagtgatcgccggtccttggccggcgccggcggcggggactactgctcgaaattcgatggcaaggtggcgctgatgtcggcaaagagcatgcaccagctgcacattttcatcttcgtgctcgccgtgttccatgttacctactgcgtcatcaccatgggtttagggcgcctcaaaatgaagaaatggaagaagtgggagtcacagaccaactcattggagtatcagttcgcaatcgatccttcacgattcaggttcacgcatcagacgtcgttcgtgaagcggcatctgggatcattctcaagcacccctgggctcagatggatcgtagcattcttcaggcagttctttgggtccgtcaccaaggtggactacctgaccatgcggcaaggcttcatcaatgcgcatttgtcgcagaatagcaagttcgacttccacaaatacatcaagaggtctttggaggacgacttcaaagttgtcgttggcatcagcctccctctgtggttcgtcggaatccttgtactcttcctcgatatccacggtcttggcacacttatttggatctcttttgttcctctcatcatcgtcttgttagttgggaccaagctagagatggtgatcatgcagatggcccaagagatacaggacagggccactgtgatccagggagcacctgtggttgaaccaagcaacaagtacttctggttcaaccgccctgactgggtcttgttcttcatacacctgacactcttccatgcaacacctggtctgaagaaatgcttccatgaaaatatttggctgagcatcgtggaagtcattgtggggatctctcttcaggtgctatgcagctacatcaccttcccgctctacgcgctcgtcacacagatgggatcgaacatgaagaagacaatcttcgaggagcaaacgatgaaggcgctgatgaactggaggaagaaggcgatggagaagaagaaggtccgggacgcggacgcgttcctggcgcagatgagcgtcgacttcgcgacgccggcgtcgagccggtccgcgtcgccggtgcacctgctgcaggatcacagggcgaggtcggacgacccgccgagcccaatcacggtggcctcaccaccggcaccggaggaggacatatacccggtgccggcggcggctgcgtctcgccagctgctagacgacccgccggacaggaggtggatggcatcctcgtcggccgacatcgccgattctgatttttccttcagcgcacaacggtga</cdnaseq>

Protein Sequence

<aaseq>MAGGRSGSRELPETPTWAVAVVCAVLVLVSVAMEHGLHNLSHWF RRRQKKAMGDALDKIKAELMLLGFISLLLTVAQAPISKICIPKSAANILLPCKAGQDA IEEEAASDRRSLAGAGGGDYCSKFDGKVALMSAKSMHQLHIFIFVLAVFHVTYCVITM GLGRLKMKKWKKWESQTNSLEYQFAIDPSRFRFTHQTSFVKRHLGSFSSTPGLRWIVA FFRQFFGSVTKVDYLTMRQGFINAHLSQNSKFDFHKYIKRSLEDDFKVVVGISLPLWF VGILVLFLDIHGLGTLIWISFVPLIIVLLVGTKLEMVIMQMAQEIQDRATVIQGAPVV EPSNKYFWFNRPDWVLFFIHLTLFHATPGLKKCFHENIWLSIVEVIVGISLQVLCSYI TFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDADAFLAQMSVDFATP ASSRSASPVHLLQDHRARSDDPPSPITVASPPAPEEDIYPVPAAAASRQLLDDPPDRR WMASSSADIADSDFSFSAQR</aaseq>

Gene Sequence

<dnaseqindica>1..126#266..323#2242..2438#2525..2641#2786..2846#2952..3040#3157..3231#3341..3429#3552..3601#3706..3746#3875..4048#4353..4481#4897..5277#atggcaggtgggagatcgggatcgcgggagttgccggagacgccgacgtgggcggtggccgtcgtctgcgccgtcctcgtgctcgtctccgtcgccatggagcacggcctccacaacctcagccatgtacccgcgcgcgcacgcggtgtgctcatctctcgagttaatttggttgttgttgttgttgtgttcttgtgacatctcaattaacatccgatcctggtcgatcgatcgccctgtggtggcgctactgcttgcattgcagtggttccgtaggcggcagaagaaggccatgggcgacgccctcgacaagatcaaagcaggtcaccctcagcctcagctcaccctcagctagctcttactccctccatccctaaatgtttgacgccgttgacttttttaaatatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctttttctaccatttgattcattgctaaatatactattatgtatacatatagttttacatatttcaccaaagtttttaaataagacgaatggtcaaacatgtttaaaacagtcaatggcatcaaacatttagggaagaagggaatattatattgctgctcccctctagccactttgctgcctccctcgtcattttttcaagtattttacgcaagactgggtcctccaaatcaaacgtcacaaataagccgtttatagtttcctttcgctttttaaggggggactacttgtatttaatcatggaggaaactaccagtcggatgtccgattacttaaaaaaaattcgggtgactaatttttttggttgatcatcggtgaaatattaggttatatatgttaaaaaaaatcagccacaaacaatgaaatattttgtgaaacacatattagacacgttgaaacgtatcattgttacgtataaaacatctaatgttaacagattaaaacatatgtttttctttcatcagaatataatcatgcgatatattattgtaaagatataattacaacgaatacaacggtgtgatcggattatatatatatattagtagtttaagagaaaaatcattttgaagattactagatacatacacgtatagatggatgaagtggagagagattagagataagtagttatatgaattttgtgaaacacacttaagacatatgttcaaacatactgctattatgtatgaaatattgagttttaacggtttaaaacacatattcttttaattagaatgtaataatgtgatatcttgttgtaaaatttaattacatctaatataacggtgtgattagattgtatgttggataacatgcccatcggttggcttattcagggaataagccaaacggtatatttgcaaacgaaaaataatttgtaaataaaacttttatgtatgtgttcttaacgatctagcagcaaaggctgaaaaataaacttcgatgaaaaatctcaaaatcaactcttaaaattcaaattttggcttataagtatagttcctaactagtttagaagaaaaaatatttaaagcggggaagaggaaaaggaataaactaatagctaaattattgcatgcatgtagcgatttgaggacgaccgagttgttttgtctggatcagccgaccgagacagagcaatcttctttaatcataaatgaccagaaaaaccataccagttcatcacaatggaccgagtcagagtcattacatatttttcattgttgcgcacaggattcaccatgttcttatgggaaatatttttaactctcaaatggttatgattttgaactctcatttttgagagagaattaacaagcgagcgagcaatcaggccaaaaaggagaaagaaaaattatttttgttaatttgtttttttaaggtagggtggaggagtcattacatgatttttttttatattccctcgttgattatatgctgttcaaatggttatgatttttttaaaaaataacaacaatacaaattagtatgtgatagatcatttcacgagcatgtaggattaaatttaacttctgtaaattacaaaacaaacaagtttaactgttaatatacattaaatttgttttttttcaacttaggaattgaattttatgtatatatttgtaaaatgatatattaatttatttttttaaaaaaataattatttagatggcacacaaactagaaaaccaccgcagttctcatatttcttgtcctatctgcacttgcagagctgatgctgctgggcttcatatccctgcttctcaccgtggcacaggcgcccatctccaagatctgcatccccaagtcggctgccaacatcttgttgccgtgcaaggcaggccaagatgccatcgaagaagaagcagcaagtgatcgccggtccttggccggcgccggcggcggggactactgctcgaaattcgatgtgagaataacaccagctgccggcaagcacaacctcgatgcaataactaatttaactataattgatttttcttgggttttctgcagggcaaggtggcgctgatgtcggcaaagagcatgcaccagctgcacattttcatcttcgtgctcgccgtgttccatgttacctactgcgtcatcaccatgggtttagggcgcctcaaagtgagtttgtcgttctgtccctcatgcacatgttttctctagttctagcaagattgtcagtccttcaaatggattgtttcgacaagaaacccaatttattaatttgccagtaaatatataataattggtctttcttggttttagatgaagaaatggaagaagtgggagtcacagaccaactcattggagtatcagttcgcaatcggtagtgaattaagaatctccctaactatttcatttcagaacctttatgataatgtcttgaaagaggaggagcaaatcagctgaaaaatatgatcgatccatgcagatccttcacgattcaggttcacgcatcagacgtcgttcgtgaagcggcatctgggatcattctcaagcacccctgggctcagatggatcgtgagttatcaatctccgaatacatgcttgttttttattcttgcaactggcctagctgttccaattcaatccatattttttgaaaaaaaaaatattcatgccgtgtttgttgttaggtagcattcttcaggcagttctttgggtccgtcaccaaggtggactacctgaccatgcggcaaggcttcatcaatgtatatactaatcaaacctgaccaattcaacattgatgatgcaaacagagaccaggtttttttttcgagtgtgcattgagtaatggttttagcttcttctcttttgcaggcgcatttgtcgcagaatagcaagttcgacttccacaaatacatcaagaggtctttggaggacgacttcaaagttgtcgttggcatcaggtccgtcctcgctttattaattataggactcttatattcaacattttttttataaagaaacatatttagtctccagttgtgtatgtgtatgtggatcttgacacatttggctggttttgcagcctccctctgtggttcgtcggaatccttgtactcttcctcgatatccacggtaatccttgtcctatttcattctgttttttactctcaaaaccttgttctgaattggtcttataatcaccatcgattttttttcaactttttccccgcgtgtaggtcttggcacacttatttggatctcttttgttcctctcatcgtaagagcgaaatttccctgtccaaagaaacagttaacataattaattatgctttaatttatcatgaaaattaatatgatcatataactaatgaacaaacattcatgtgaatgccaccgttgtctcagatcgtcttgttagttgggaccaagctagagatggtgatcatgcagatggcccaagagatacaggacagggccactgtgatccagggagcacctgtggttgaaccaagcaacaagtacttctggttcaaccgccctgactgggtcttgttcttcatacacctgacactcttccatgtacatgtttaaaacctaaaccttgctgctcaactacaaatagtactttatctttcacaattaacacctaattaactaacatagcatccatccatttgtggctactgatcgatgggacgacggatcgatgatcaccagaacgcatttcagatggcgcatttcgtatggactatggtgtgtatgctacttgcttagttgttgccattatcagttcttaagcaaattaagtgtgatgcatgcactgactaatgagacaaaaaatgacacagcttgttcatcgatctggttgttttgtgtgtgacaggcaacacctggtctgaagaaatgcttccatgaaaatatttggctgagcatcgtggaagtcattgtggggatctctcttcaggtgctatgcagctacatcaccttcccgctctacgcgctcgtcacacaggtgaacaagccattcacaaattctattagcagtttcttaattgacgacgctgttaatttttagacacacgttttgaccatttgtcttattaaaaatatttatgtaattatcatttgagttgttttatcactaaaagtactttttaaataatttatattttgcatttgtacaattcttttaataagataatggtcaaacaagtgtccaaaagttaacagcatcatctattaagaaaaggagggggtttttttttggaattttgcaaaatttgttcaaaatcagtccaaaaccttttttttgtttcgaaatttcagtttcactaccagtccccataaaatgtcttttctttatttccacaatattgaacccatgagatgccctttgtgttggtatgtgttttggccatcacttgcagatgggatcgaacatgaagaagacaatcttcgaggagcaaacgatgaaggcgctgatgaactggaggaagaaggcgatggagaagaagaaggtccgggacgcggacgcgttcctggcgcagatgagcgtcgacttcgcgacgccggcgtcgagccggtccgcgtcgccggtgcacctgctgcaggatcacagggcgaggtcggacgacccgccgagcccaatcacggtggcctcaccaccggcaccggaggaggacatatacccggtgccggcggcggctgcgtctcgccagctgctagacgacccgccggacaggaggtggatggcatcctcgtcggccgacatcgccgattctgatttttccttcagcgcacaacggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0486300, RefSeq:Os06g0486300