BGIOSGA034411

From RiceWiki
Revision as of 17:43, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA034411

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034411, complete gene.

LocusTag

OsJ_33150

Ensembl Transcript ID

BGIOSGA034411-TA

Ensembl Protein ID

BGIOSGA034411-PA

Length

2811

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3482913..3485723

Sequence Coding Region

3484074..3485723,3482913..3482939

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3482913..3485723 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3482913..3485723 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAACCCAACCGACGGATGGCCGTGGCGCCGGCGCCGGCTACCCACGGTGGGTGATCCTCGACCATGAAGCCGAATACCTACACGTCAACCATCCCTGCTCCGCCGCCGCGGATGCCAAGACCGAGGCGGCCACGCTCTCCTCCGGCGGCCACACCGTGCGTGTCTCCCTAGACCTCAGGGCGCCGCCGGCGGCGTCGCGCGTGTGCTACACCTGCTCCGTTCCCGTCGACCCGGCACTAGGGCCACCCTACATGAGCGTCGCCGCCGCCCATGGCGACTCCCTGCTCGTGCTTGTGTCCTTCAGTTACCAAGAAGGGTACGAGCACCACACGGACACGATAGATAAGTACCTCTACAACGCAGGCGCCGCCGCCGCCGCCGACCCGCCTCGGCCGCCGTCGCTGGTGCATCTCCCGGCTTACTACAATGGAGAAGAGACGACCCTTCCGTCGCCGTTGCCGCACGATCTTGATGAGAAGACCACCGGCCTCCTGCGCCGCGGCGAGGCCGAGGCCGATCTGGTGGTGGCAGATCTCATCGTGAAGGATGGGGGTGAAGCTGACGCGCCGAAGAAGGAGGCCGAGCTCCTCGTGCTCCGCTCCGGCGAGTGGAGCGTCGTGCGGGCGCCGATCGTCCACGACGACGGCAAGGCCGAGGAGCTGTCCTTCTGGGAAACCGACATGGTCGTCCCAGTCGGCGACCGGCGGCTGTGCTGGGTCGACCTATGTCGCGGCATCATCCTCTGCGACATGTTCGACGACGGCGACGAGACTCTCCGGCCGCGATACTTCTCGCTCCCCATTGAGCCCCCCGCCGACGACCGAGACCGACGGAGATGCCAGATGTCAAAGAGAAGGGTCTGCGTCACCAATGGCGGAACCGTGCTGAAGCTCGTCGACGTCTCCCCGCGCTGCTGCTGCGGCCGCCGCGGCGCAACGCAGTGCGACCATTCCAGCGGTGTCTTCGTCATCAACACATGGACACTACATATGGACGGCGACGATGATGACATGGCAGCTTATTGGACCATGGACGCCATGGTCGACGCCACCGAGCTCTGGTCCCTCGACGCCTACGCCGGCGTCCCACGCATCAATCCACAATTCCCCATCGTGAGCATGGATGACCCTGATATCATATGCTTCCAAGTGCCCGAAGAACACAAGATTGGAAGAAAAATGCAATCGTGGTACATCATGCTCGACACAAGCAGCAAAACATTGATGTCAGTCTGCCGTCTCGATGAGTCAAGCTCGCTTCAATTGTCTTATGGATATGCTTACTTTGTTAGCACGGTCTCTCACTGCTTTAATTCTTCTGATGATGGGGGGTTCAACAATGATGTAACAAAGCCGGCACTGATGATCATCGATGATAAGGTGGCAACAAAAAATAATATCATCGCTAATGATTCATTGCAATCTTCATGCGAGTCATCTGCCAAAAATTCCAAGGTCAATTCTCCTAAGGAGATTTTGGCTCTTCTCCAAGAGATACCGGAGTTGTCTCGTGATGATTTGCTGAGAGCGTATAGCTTTCTTTGTTATGACAATAATGGCCGCCGGCTCAGTTCACTTTTGGGGCTCCCAATGAGTCTGAGGAAGCCATGGCTGTTGATGGAGATTAAGGCTAGTGAAGCCTGTTCGGTGCCGGATGGAAAATCCGGCACCTAG</cdnaseq>

Protein Sequence

<aaseq>METQPTDGRGAGAGYPRWVILDHEAEYLHVNHPCSAAADAKTEAATLSSGGHTVRVSLDLRAPPAASRVCYTCSVPVDPALGPPYMSVAAAHGDSLLVLVSFSYQEGYEHHTDTIDKYLYNAGAAAAADPPRPPSLVHLPAYYNGEETTLPSPLPHDLDEKTTGLLRRGEAEADLVVADLIVKDGGEADAPKKEAELLVLRSGEWSVVRAPIVHDDGKAEELSFWETDMVVPVGDRRLCWVDLCRGIILCDMFDDGDETLRPRYFSLPIEPPADDRDRRRCQMSKRRVCVTNGGTVLKLVDVSPRCCCGRRGATQCDHSSGVFVINTWTLHMDGDDDDMAAYWTMDAMVDATELWSLDAYAGVPRINPQFPIVSMDDPDIICFQVPEEHKIGRKMQSWYIMLDTSSKTLMSVCRLDESSSLQLSYGYAYFVSTVSHCFNSSDDGGFNNDVTKPALMIIDDKVATKNNIIANDSLQSSCESSAKNSKVNSPKEILALLQEIPELSRDDLLRAYSFLCYDNNGRRLSSLLGLPMSLRKPWLLMEIKASEACSVPDGKSGT</aaseq>

Gene Sequence

<dnaseqindica>1..1650#2785..2811#ATGGAAACCCAACCGACGGATGGCCGTGGCGCCGGCGCCGGCTACCCACGGTGGGTGATCCTCGACCATGAAGCCGAATACCTACACGTCAACCATCCCTGCTCCGCCGCCGCGGATGCCAAGACCGAGGCGGCCACGCTCTCCTCCGGCGGCCACACCGTGCGTGTCTCCCTAGACCTCAGGGCGCCGCCGGCGGCGTCGCGCGTGTGCTACACCTGCTCCGTTCCCGTCGACCCGGCACTAGGGCCACCCTACATGAGCGTCGCCGCCGCCCATGGCGACTCCCTGCTCGTGCTTGTGTCCTTCAGTTACCAAGAAGGGTACGAGCACCACACGGACACGATAGATAAGTACCTCTACAACGCAGGCGCCGCCGCCGCCGCCGACCCGCCTCGGCCGCCGTCGCTGGTGCATCTCCCGGCTTACTACAATGGAGAAGAGACGACCCTTCCGTCGCCGTTGCCGCACGATCTTGATGAGAAGACCACCGGCCTCCTGCGCCGCGGCGAGGCCGAGGCCGATCTGGTGGTGGCAGATCTCATCGTGAAGGATGGGGGTGAAGCTGACGCGCCGAAGAAGGAGGCCGAGCTCCTCGTGCTCCGCTCCGGCGAGTGGAGCGTCGTGCGGGCGCCGATCGTCCACGACGACGGCAAGGCCGAGGAGCTGTCCTTCTGGGAAACCGACATGGTCGTCCCAGTCGGCGACCGGCGGCTGTGCTGGGTCGACCTATGTCGCGGCATCATCCTCTGCGACATGTTCGACGACGGCGACGAGACTCTCCGGCCGCGATACTTCTCGCTCCCCATTGAGCCCCCCGCCGACGACCGAGACCGACGGAGATGCCAGATGTCAAAGAGAAGGGTCTGCGTCACCAATGGCGGAACCGTGCTGAAGCTCGTCGACGTCTCCCCGCGCTGCTGCTGCGGCCGCCGCGGCGCAACGCAGTGCGACCATTCCAGCGGTGTCTTCGTCATCAACACATGGACACTACATATGGACGGCGACGATGATGACATGGCAGCTTATTGGACCATGGACGCCATGGTCGACGCCACCGAGCTCTGGTCCCTCGACGCCTACGCCGGCGTCCCACGCATCAATCCACAATTCCCCATCGTGAGCATGGATGACCCTGATATCATATGCTTCCAAGTGCCCGAAGAACACAAGATTGGAAGAAAAATGCAATCGTGGTACATCATGCTCGACACAAGCAGCAAAACATTGATGTCAGTCTGCCGTCTCGATGAGTCAAGCTCGCTTCAATTGTCTTATGGATATGCTTACTTTGTTAGCACGGTCTCTCACTGCTTTAATTCTTCTGATGATGGGGGGTTCAACAATGATGTAACAAAGCCGGCACTGATGATCATCGATGATAAGGTGGCAACAAAAAATAATATCATCGCTAATGATTCATTGCAATCTTCATGCGAGTCATCTGCCAAAAATTCCAAGGTCAATTCTCCTAAGGAGATTTTGGCTCTTCTCCAAGAGATACCGGAGTTGTCTCGTGATGATTTGCTGAGAGCGTATAGCTTTCTTTGTTATGACAATAATGGCCGCCGGCTCAGTTCACTTTTGGGGCTCCCAATGAGTCTGAGGAAGCCATGGCTGTTGATGGAGATTAAGGCTAGTGAAGCCTGTTCGGTTTGTTGTGCATGTAGAGCAGACATGCAAAATGTGTGAAATACTTTGTGTAGTACATTAAGTGTGTGACTGTGTGCATTGCTGTTTGGTTGATTAATTGCGCTAAATCGAGCAGCTTAGTTCTCGTATAATATAGTTTTTATTTTAGGATATTTTATGATTAATTAACGAGAAAAAAATAACAATTGTTTGCAATTTCCATACTATAGCTATTCTTTTAGCTAATTGTGCTAACTCATCTTCTTCCACCTCTGTGAGCTGAAAACACAAAAAAACTAACACATTTACTATAGGCGTCGGTTAAAAAATAAACCGGCACATTCCACATATAATATAGATGAAAAACTGACACTTATAATATATTATAGGTGTCGGCTTTTTTAAAAATAACGCCACCCTTAATTCGAGCCAAGCCAAACCGCACCACACCTTCTCATCCACCGCATCCTCTCCTCCTCATCTCTTCCTCATCCACCCTTCTCTCTTGGCTCTCTCTCTCTCTCTGGGTTCCCCCCTCTCTCTCTCTTTCGGCACTCTTAGTCGCAACAACAACGGCAACGGGAGGAGAGGCGGCAGTGGCTGGTGGCGCCACCCCCTCCGCCAAATCCAATGGGAGGAGATGCGACGGCAGCTACGTGTGGTGGCAGGAGGTAGGCGGCGGCAATGGCGTGTTGCGGCGGGACGAGAGGCGATAGCGTTTTGGGTGGTGCCCTCCCCTCCGCCAGATCCGGCGGGAGGGGAGATGACGACAGCGACGTGCGGCGGTAGGAGGCAGGCAGCGATAGTGGTGGCGGCGGCAGACGACGCCTTCCAACGTGCTGCGGGATCCGCTTCTTTGTCATTGCTGACGAGCTGCGTTGCTCATCTGCAGCTCCATCCTCTCCATGGAGGCTGTTGTCCATCCTCTCCATCTTCTTTGTGTTTTGCATTTGTGTTGATGTTCTTGGATCGATGTTTTTGAATTCTTGAAGCCAATTAATTCTATGAATTAAATGTTGGGTAAAATTGGGTGAGGGGGGCACCGCGATTCAAGCCGATGCATTGATCCACTTTTTTTTTTAGATTTTTGGGATCTTAAAGGTGTCCGTTTTAGAACTGACACCTTTGATTTCTATCATCTGTGCCACTTTTCAGGTGCCGGATGGAAAATCCGGCACCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034411