BGIOSGA034445

From RiceWiki
Revision as of 17:43, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA034445

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034445, complete gene.

LocusTag

OsI_35236

Ensembl Transcript ID

BGIOSGA034445-TA

Ensembl Protein ID

BGIOSGA034445-PA

Length

1628

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2968912..2970539

Sequence Coding Region

2969229..2970539,2968912..2969085

Genome Context

<gbrowseImage1> name=IndicaChromosome11:2968912..2970539 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:2968912..2970539 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCAACCGCGGGTGCTGCCGCGGAGCCACCCATGGTGGAGCAAGTGATCACCGAGTTTTTCGCCAAGAGCCTCCACATCATACTGGAGTCACGCTCTCCGTACGAGTCGTCGCGCAACTTCACGCGGCCCTCGCCACCGTCCTCGCCGCTGTCCGGGAGCCAGCCACGCGACCGGTGGTTCAACCTTGCGCTCCGGGACTGCCCGGCTGCGCTCGAGAACTTTGACCTGTGGCGGCAGAGCAACCTTGAGCCGTTGGTCATTGACATTGTCCTCTTATGCCGGGACAGCACCAGCAACACAGCTGCTGGGAGTGGGAAGATTATAGAGAGGTGGGTGATACAGTATGAAGCTCGCAAGTCTGGCGGTGGCAATGGTAATGGCAGCAAGAACAATGGCAGGAAGTCTAGGAACAGCTCGGCTGAGGATCATAGCTTGTACAGGGCTACCTACCTGGGATCGACAGTGTTACTCCGGTCATTGCATCTGCTCGTCAGGCTCTTGCCAGCATACAGTCTCTTCAGGGAACTGAACTCATCTGGGAGAATCCGTCCTCTCAACCTGTCACACAAGATATCTTCATTTGTTGAGCCATTCACCCGGGCAGAGGATGCAGAGATGAAACACTATGCATTTGCTCCAATTGAAACTCTGTTTGGCCGATTGAGCTTGTCAGTTTCTTATGTGCCAGTGTTGGAGGTGGTGGCAGCTTCAGAACCTACATCACCAATGCCACCAGAGATCATAACGGATTACGTTGGGAGCCCCACAACTGACTTTCTAAAGAAATTCAATTCCCTCCCTTCAGCTGGCATTGCACCTGCATGTGCTGCAATGACCAGGAGGCACAGTTGGAGTATTGAGCACGGAGCTGGAACGTCAGCGTCGCCATCTCCTTCTCCCACTAAGGCACAATCCCGTGGAAGCCCACAGCTAGGCGTTCCTCTGCATGTTTCTCTAAAAACATGCTCACATCCACAAAATGCATCATCCTCTGGGCAGAAGAAATATACACCATTTGAAGAATGCTATCCATCACCACCATTGTCACCATCACCATCCCAATCCCCTTCAGCTAACTACCCTAAAAACCCTTTGTTCCGATATGAGAGTGCACCAGTTACTATTCCCACATTGAAGTCAGGCGGAGGAGGAGGTAGCGGGTTGCCTCCTTCTCCATGTTCGAAGGGTAAGCACCAGTTCTCATCTGACAATGACAACCTGGCACATTCCCCTGATCATAACTCAAATGTAAGGAAGGATCTAGTCAGGTTGGGTGAATTTGAAAAGGACATGGCCTTGCAAAAGGTATTATCTTACAGTAAATATGATTTGGGATACTTTCATGGACTGAAATTGACTCGGACATCAAGTAAACTTTTTATTATGGATGAACTGGATGAACATGAATTGGTTTTTGCATGGGAAGATAGAGACACCATAATTGATCAGCTTAACAGGTATTCTTTCCTAGTCACCTAA</cdnaseq>

Protein Sequence

<aaseq>MAATAGAAAEPPMVEQVITEFFAKSLHIILESRSPYESSRNFTRPSPPSSPLSGSQPRDRWFNLALRDCPAALENFDLWRQSNLEPLVIDIVLLCRDSTSNTAAGSGKIIERWVIQYEARKSGGGNGNGSKNNGRKSRNSSAEDHSLYRATYLGSTVLLRSLHLLVRLLPAYSLFRELNSSGRIRPLNLSHKISSFVEPFTRAEDAEMKHYAFAPIETLFGRLSLSVSYVPVLEVVAASEPTSPMPPEIITDYVGSPTTDFLKKFNSLPSAGIAPACAAMTRRHSWSIEHGAGTSASPSPSPTKAQSRGSPQLGVPLHVSLKTCSHPQNASSSGQKKYTPFEECYPSPPLSPSPSQSPSANYPKNPLFRYESAPVTIPTLKSGGGGGSGLPPSPCSKGKHQFSSDNDNLAHSPDHNSNVRKDLVRLGEFEKDMALQKVLSYSKYDLGYFHGLKLTRTSSKLFIMDELDEHELVFAWEDRDTIIDQLNRYSFLVT</aaseq>

Gene Sequence

<dnaseqindica>1..1311#1455..1628#ATGGCTGCAACCGCGGGTGCTGCCGCGGAGCCACCCATGGTGGAGCAAGTGATCACCGAGTTTTTCGCCAAGAGCCTCCACATCATACTGGAGTCACGCTCTCCGTACGAGTCGTCGCGCAACTTCACGCGGCCCTCGCCACCGTCCTCGCCGCTGTCCGGGAGCCAGCCACGCGACCGGTGGTTCAACCTTGCGCTCCGGGACTGCCCGGCTGCGCTCGAGAACTTTGACCTGTGGCGGCAGAGCAACCTTGAGCCGTTGGTCATTGACATTGTCCTCTTATGCCGGGACAGCACCAGCAACACAGCTGCTGGGAGTGGGAAGATTATAGAGAGGTGGGTGATACAGTATGAAGCTCGCAAGTCTGGCGGTGGCAATGGTAATGGCAGCAAGAACAATGGCAGGAAGTCTAGGAACAGCTCGGCTGAGGATCATAGCTTGTACAGGGCTACCTACCTGGGATCGACAGTGTTACTCCGGTCATTGCATCTGCTCGTCAGGCTCTTGCCAGCATACAGTCTCTTCAGGGAACTGAACTCATCTGGGAGAATCCGTCCTCTCAACCTGTCACACAAGATATCTTCATTTGTTGAGCCATTCACCCGGGCAGAGGATGCAGAGATGAAACACTATGCATTTGCTCCAATTGAAACTCTGTTTGGCCGATTGAGCTTGTCAGTTTCTTATGTGCCAGTGTTGGAGGTGGTGGCAGCTTCAGAACCTACATCACCAATGCCACCAGAGATCATAACGGATTACGTTGGGAGCCCCACAACTGACTTTCTAAAGAAATTCAATTCCCTCCCTTCAGCTGGCATTGCACCTGCATGTGCTGCAATGACCAGGAGGCACAGTTGGAGTATTGAGCACGGAGCTGGAACGTCAGCGTCGCCATCTCCTTCTCCCACTAAGGCACAATCCCGTGGAAGCCCACAGCTAGGCGTTCCTCTGCATGTTTCTCTAAAAACATGCTCACATCCACAAAATGCATCATCCTCTGGGCAGAAGAAATATACACCATTTGAAGAATGCTATCCATCACCACCATTGTCACCATCACCATCCCAATCCCCTTCAGCTAACTACCCTAAAAACCCTTTGTTCCGATATGAGAGTGCACCAGTTACTATTCCCACATTGAAGTCAGGCGGAGGAGGAGGTAGCGGGTTGCCTCCTTCTCCATGTTCGAAGGGTAAGCACCAGTTCTCATCTGACAATGACAACCTGGCACATTCCCCTGATCATAACTCAAATGTAAGGAAGGATCTAGTCAGGTTGGGTGAATTTGAAAAGGACATGGCCTTGCAAAAGGTAATTGATATCTGTTATTTGTTCAAGCAACATGTGAAATTTGCAATGAGCCAATAACAATAATTTTATTATGAGATTCCTACCCTAGGATAATTGGATCTGATTTTTGGCTGATGATTTTCTTGTTCTGCTTTCTGCCCTAGGTATTATCTTACAGTAAATATGATTTGGGATACTTTCATGGACTGAAATTGACTCGGACATCAAGTAAACTTTTTATTATGGATGAACTGGATGAACATGAATTGGTTTTTGCATGGGAAGATAGAGACACCATAATTGATCAGCTTAACAGGTATTCTTTCCTAGTCACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034445