Os06g0493600

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Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0493600| Description = Similar to PHO1-like protein| Version = NM_001064217.1 GI:115468165 GeneID:4341088| Length = 4865 bp| Definition = ...")
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Gene Name

Os06g0493600

Description

Similar to PHO1-like protein

Version

NM_001064217.1 GI:115468165 GeneID:4341088

Length

4865 bp

Definition

Oryza sativa Japonica Group Os06g0493600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18007112..18011976

Sequence Coding Region

18007191..18007433,18007811..18008171,18008758..18009211,18009281..18009329,18009423..18009494
,18009590..18009719,18009800..18009920,18010012..18010261,18010352..18010456
,18010552..18010596,18010751..18010903,18010990..18011268,18011363..18011499
,18011575..18011662

Expression

GEO Profiles:Os06g0493600

Genome Context

<gbrowseImage1> name=NC_008399:18007112..18011976 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18007112..18011976 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaagttctccaagcagttcgagggccagcttgtgcccgaatggaaggacgccttcgtggactactggcagctcaagaaggacatcaagaggctgcaggctgcggaggcggaggcggccggggtggcggcgacgacgccgctgtcgcagtgccaggcgccggtggcggcggctcactgggtcatgaggctgccgttcttgcacccccatggacaccaccacaaggagcatggtgccatccaggtgcataggaagctggccagcggcggaggcggcggcggcggcgcggtggccggagaggtgtacgaaacggagctcgtggacggcggcgccgggttcgcggacggcgaggcggcgagggccttcttcgcgaggctggacgagcagctcaacaaggtgaaccgcttctacgagcggaaggaggccgagttcgtggagcgcggcgagtcgctccgccgccagctgcagatcctcgccgagctccgggccgccgtcgtcgccgagcagcagcgcgacgggcgccgccgccgatgcggcaacggcggcgactcctcgccgccggacacggaggatccctccgtctcctgctccatcctccacggagatcagtccctcagaggcacttctgagcaagaacaggaaggccaggaaaagctcaccaaagacatgattgcaaggagccctgacgaaggagacgatgatcagctcaccatccctcaagaattgggcgattcagggaggcttggcaggccaagagaagaagccgccaacaccaggccgaggacgacgctcccaggaggcagggcggtcacctgccaaggcagaagcgtcaggatcaacatcccggtgaccacgccgacgaggaccgtcaccgccatccgtgagcttctgttcgacgacatgctaagccagtcgaggaggagcggtagcgccaacggtacaaaatgcggcgacaagctgagcatcaacaagaggaaggtgcatcaggcagagaagatgataaggggtgccctgattgagctgtacaagggattggggtatctcaagacataccggagcttaaacatgatggcgtttgtgaagattttgaagaaatttgacaaggttacagcaaaggaagctcagtcaatataccttaaagtagtggagagctcctacttcaatgtctctgacaaggtaattaggctaatggacgatgtggatgagctgtttgtgaggcattttgcagaaggtgacaaacggaaagcaatgaagtatcttaagccaaatcagagggaagaatcacacaccacaacatttttcatagggctattcactggtggctttgcagcattattcattggttattgtatcatggcacacattgctgggatgtacacccagcagtcaaacaaggtctacatggcaacatcatatcctgtcctgagcatgttcagcctcttctttctgcatctcttcctctacggatgcaacatcttcatgtggagaaagacacgcataaactacacattcatatttgaattcacgcctaccaaagagctgaagtatcgtgatgtgttcctgatttgcactacttccatgacaattgtcattggtgttatgtttgcacacctgacactcattgtcaaagggtattcgtcatgtgcagtccaagcaataccaggagctctacttctggttttcttgctaatattggtctgccctttcaacatactctaccgatcatgtcgttaccacttcctaacagtgatcagaaacatcattctaacccctttctacaaggttgtcatggttgatttcttcatggctgatcagctttgcagccaggtaccactgcttaggagcctagagtatctggcgtgctattacataaccagcagctacaagacacaagactatggctactgcaccagagtgaagcactttagagatttggcttatgcagtatccttcctaccttactactggagggccatgcagtgcgcaaggagatggtttgacgagggggacataaatcacattgtcaaccttgggaagtatgtgtcagcaatgcttgctgctggaacaaaagtggcatacgagaatgataacagtgctggatggctgtcacttgttgtcattgtgtcgagtctcgccactatctaccaactatactgggactttgtcaaggattggggtcttctgcagtttaactccaagaacccttggctccgtaatgatctgatactcaaacaaaagtacatctatttcctttccatgggtctgaaccttatcttgaggctggcatggcttcagaccgtcatccaccctaacatcggaagcctggattccagagtaactttgttcatcttggcagctcttgaggtgattcgacgaggccactggaacttctacaggttggaaaacgagcacctaaacaatgcagggaaattcagagctgtgaaggttgttccacttccttttcatgaagtggaagaggactaa</cdnaseq>

Protein Sequence

<aaseq>MVKFSKQFEGQLVPEWKDAFVDYWQLKKDIKRLQAAEAEAAGVA ATTPLSQCQAPVAAAHWVMRLPFLHPHGHHHKEHGAIQVHRKLASGGGGGGGAVAGEV YETELVDGGAGFADGEAARAFFARLDEQLNKVNRFYERKEAEFVERGESLRRQLQILA ELRAAVVAEQQRDGRRRRCGNGGDSSPPDTEDPSVSCSILHGDQSLRGTSEQEQEGQE KLTKDMIARSPDEGDDDQLTIPQELGDSGRLGRPREEAANTRPRTTLPGGRAVTCQGR SVRINIPVTTPTRTVTAIRELLFDDMLSQSRRSGSANGTKCGDKLSINKRKVHQAEKM IRGALIELYKGLGYLKTYRSLNMMAFVKILKKFDKVTAKEAQSIYLKVVESSYFNVSD KVIRLMDDVDELFVRHFAEGDKRKAMKYLKPNQREESHTTTFFIGLFTGGFAALFIGY CIMAHIAGMYTQQSNKVYMATSYPVLSMFSLFFLHLFLYGCNIFMWRKTRINYTFIFE FTPTKELKYRDVFLICTTSMTIVIGVMFAHLTLIVKGYSSCAVQAIPGALLLVFLLIL VCPFNILYRSCRYHFLTVIRNIILTPFYKVVMVDFFMADQLCSQVPLLRSLEYLACYY ITSSYKTQDYGYCTRVKHFRDLAYAVSFLPYYWRAMQCARRWFDEGDINHIVNLGKYV SAMLAAGTKVAYENDNSAGWLSLVVIVSSLATIYQLYWDFVKDWGLLQFNSKNPWLRN DLILKQKYIYFLSMGLNLILRLAWLQTVIHPNIGSLDSRVTLFILAALEVIRRGHWNF YRLENEHLNNAGKFRAVKVVPLPFHEVEED</aaseq>

Gene Sequence

<dnaseqindica>80..322#700..1060#1647..2100#2170..2218#2312..2383#2479..2608#2689..2809#2901..3150#3241..3345#3441..3485#3640..3792#3879..4157#4252..4388#4464..4551#acactaccactgctactctctccatcagtccacaaagaggaaggtggaggaagaagacctgcaaggtgagaggaggccaatggtgaagttctccaagcagttcgagggccagcttgtgcccgaatggaaggacgccttcgtggactactggcagctcaagaaggacatcaagaggctgcaggctgcggaggcggaggcggccggggtggcggcgacgacgccgctgtcgcagtgccaggcgccggtggcggcggctcactgggtcatgaggctgccgttcttgcacccccatggacaccaccacaaggagcatggtgccatccaggcatgcaaccactgcatttttatattaatttgtgcaaattactccctctagtgaaaaaatatttaacatttcgtccaagatttttgatcaaactgctatagaaacttgactcttgttttacattataataagtttatgaaatctaataagctatgatattaatatagcacctttttagacaaatctacatataccccttttttttcattttcaaactaatcataagaatttgagagattattgttgattaaagttttgaaagtttaatcctatcctaaacatcaagggaaattttcagcaattttcatggttacgggtgttcgtaaaagtaataactgtatctgttctgctgttggcacgtgtgcaatgcaatgcaggtgcataggaagctggccagcggcggaggcggcggcggcggcgcggtggccggagaggtgtacgaaacggagctcgtggacggcggcgccgggttcgcggacggcgaggcggcgagggccttcttcgcgaggctggacgagcagctcaacaaggtgaaccgcttctacgagcggaaggaggccgagttcgtggagcgcggcgagtcgctccgccgccagctgcagatcctcgccgagctccgggccgccgtcgtcgccgagcagcagcgcgacgggcgccgccgccgatgcggcaacggcggcgactcctcgccgccggacacggaggatccctccgtctcctgctccatcctccacggtacgtgcgtacatactctccagtctccatctctcttctgctaacacctgcacgtactgtgtcatcaaatacgtcacattagaatagtcaaagtgcacattaattagtttttgatgtgtaaatgaacatgattgaaatgatggtaattttttgggacagataagatataagtttggtggtgtagcatttcgattagtacattgatattgttgttgccattcatgccagctgagaatagattttgattaggcaggctgacatatacgtatacccaacacacccatagtctcatatagatgtatcctacatatatacacctatagcagaaagaatcctgcaagtgaccatcttctttttctctgaatacaaatagttgcatacgcaccaatcagaaataatccatgaatgaacctataaaaaagacgtgctgaaacgcgcatacagttgctaaagaaacacgcttttgtattgtttgggtcggatgtgttctctaatctaaaccatccctctgaatttagtaacaacatacaaattgaagtagactgaacttatcattattcatgacacatcctctaaaaaatcacaggagatcagtccctcagaggcacttctgagcaagaacaggaaggccaggaaaagctcaccaaagacatgattgcaaggagccctgacgaaggagacgatgatcagctcaccatccctcaagaattgggcgattcagggaggcttggcaggccaagagaagaagccgccaacaccaggccgaggacgacgctcccaggaggcagggcggtcacctgccaaggcagaagcgtcaggatcaacatcccggtgaccacgccgacgaggaccgtcaccgccatccgtgagcttctgttcgacgacatgctaagccagtcgaggaggagcggtagcgccaacggtacaaaatgcggcgacaagctgagcatcaacaagaggaaggtgcatcaggcagagaagatgataaggggtgccctgattgagctgtacaagggattggggtatctcaagacataccggtaagtgtaactgacatgtaatgcttggcttggttttatgcgcgtactgacaagacaatcttgctgcaggagcttaaacatgatggcgtttgtgaagattttgaagaaatttgacaaggttcctgccaattcctcttccttctgattccatgacctgaaatttatcacgtattagaatttctgaaagaacatgaatatcttctcatttcaggttacagcaaaggaagctcagtcaatataccttaaagtagtggagagctcctacttcaatgtctctgacaaggtattttccaatcatgcagaacctaaagaaactctgaatcagttaattctattaacacagcaaagatcatgatttaaaattctttatttgaacaggtaattaggctaatggacgatgtggatgagctgtttgtgaggcattttgcagaaggtgacaaacggaaagcaatgaagtatcttaagccaaatcagagggaagaatcacacaccacaacatttttcataggtaataattcttaataatctttgcattaactcatcagcccaaatttaagattatttatgcacacgcttgtcaatttccagggctattcactggtggctttgcagcattattcattggttattgtatcatggcacacattgctgggatgtacacccagcagtcaaacaaggtctacatggcaacatcatatcctgtcctgaggtcagctaaaaaatgcaactcaactgctacagcacacctgaaaaaaaacgaaaaattgctctaattctgattaaatgatctcaaactgcagcatgttcagcctcttctttctgcatctcttcctctacggatgcaacatcttcatgtggagaaagacacgcataaactacacattcatatttgaattcacgcctaccaaagagctgaagtatcgtgatgtgttcctgatttgcactacttccatgacaattgtcattggtgttatgtttgcacacctgacactcattgtcaaagggtattcgtcatgtgcagtccaagcaataccaggagctctacttctggtatgcagtgttgaacattccaagtgtaaaattatatgcttacatttgaaagatattaaacatttatgaggttggtgcccatctattcaggttttcttgctaatattggtctgccctttcaacatactctaccgatcatgtcgttaccacttcctaacagtgatcagaaacatcattctaacccctttctacaaggtatttttattatagttgaagagaagtagcttatcgatgatgttctatcaaattccacatccaaaacaaattgctaaatatttgtacgtctgtaggttgtcatggttgatttcttcatggctgatcagctttgcagccaggtaattacttaacagaagccacacctaggcctttacttgctcagcagagcacattttcagcatgacgaaagtggttttgtcaccgtaagtgtctgtttgagtgatgattctgtacagaaaaaagactaataaaacaatgactcctggaaactaggtaccactgcttaggagcctagagtatctggcgtgctattacataaccagcagctacaagacacaagactatggctactgcaccagagtgaagcactttagagatttggcttatgcagtatccttcctaccttactactggagggccatgcaggtatataattcaaatcatacactgcaacgtcccttcttcagacagtatgaagatttcatatcttttgttttgtaatggttgggcagtgcgcaaggagatggtttgacgagggggacataaatcacattgtcaaccttgggaagtatgtgtcagcaatgcttgctgctggaacaaaagtggcatacgagaatgataacagtgctggatggctgtcacttgttgtcattgtgtcgagtctcgccactatctaccaactatactgggactttgtcaaggattggggtcttctgcagtttaactccaagaacccttggctccgtaatgatctgatactcaaacaaaagtacatctatttcctttccatggtatgttctcttaaaaaactaaggtcctgcatcagtacttttagaacaaagatagatttcaggatacttacattagaatccttttttttttcagggtctgaaccttatcttgaggctggcatggcttcagaccgtcatccaccctaacatcggaagcctggattccagagtaactttgttcatcttggcagctcttgaggtgattcgacgaggccactggaacttctacaggtaaaaaaccatagctaattaagctacaaaagtgaacttaaacctagattgatactaagaaaacttacatgtcaggttggaaaacgagcacctaaacaatgcagggaaattcagagctgtgaaggttgttccacttccttttcatgaagtggaagaggactaacaaaatagggcatcatcatcatcattgcagcagattctagggattcagaactctaagcagttcagatgtaacaccaactaatgttagaaagcctgcactaccctattatgattcaattaaattttttggtgtgaggaataatgggcatttaacatgttcagtttggagaagatacaagcaaaaggcaaacactatatagatgtagaatacaggggttccaattagtttaccaagatcgaatactaatctcgtggagttgaagcgaattcacttgtggaaaaatccaatcaatcacaattgttcttttggccact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0493600, RefSeq:Os06g0493600