BGIOSGA034640

From RiceWiki
Revision as of 17:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA034640

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034640, complete gene.

LocusTag

OsI_34817

Ensembl Transcript ID

BGIOSGA034640-TA

Ensembl Protein ID

BGIOSGA034640-PA

Length

6984

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:104557..111540

Sequence Coding Region

111449..111540,110640..110840),complement(110448..110514,109936..110123),complement(109731..109814
,109467..109559),complement(108133..108367,107940..108045),complement(106675..106852
,106458..106562),complement(105691..105861,105421..105550),complement(105067..105276
,104557..104700

Genome Context

<gbrowseImage1> name=IndicaChromosome11:104557..111540 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:104557..111540 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTGATTATAGGTCTCATTTGTGGGGCTTCACCGCCAACGAGAAAGAGGCATACTCAGGAGAAAACGATGAACGCCAGCAGATCCTACAGTTGATAATAGAAGAGAAACAACCTGAGATCTTGGAATTGCCTGGCGGAGGGATACAAGTGCATCAGGAGATAGACGCTGCGGTTGCAGAGCTGATAGAACAAGAAGCCCTTGATGAATTAGAGCAACTGGTGAAAGCCCAACCAGAAGCCGCTGCAGATCAGCAAAATCCAGTTGAGCCACATCAAGATGAGGATGACAAGCTGAGTTTGGATAATTTGTTGGAACAACATCGTTGGGAGGGAGCTCTGCGGCGGCTGACGCGCATGATAACACCTTACTTTACCATTGCGGGTGCTCTAAGGCTGATGCGTTCTGGCAATACTGCTGCTGCAATGCGCTATTATCATGACAAAATTGAGTCCATTTATTCAGGAGATACCGGAAGTGCCTTTGTCAACGGTGGTGTTTTGAAAGAAATCCGGGATTGGGTTAATGCAAAGAGAGATACTCCATTGGGAGAAGATGAAGCTACGACCCATATGGAGAACACCTGCCATGCGATCCATGACTATTTGAAGCTTTATTTCCCGGCATACAGGCCACAAATTGGGGGAAAGGTTAGAGGTCACCAAGTAAGCAGGGTCTGGGAGCTTGGGGAGAGGCTTGGAAAAGATGACGGCCGCTGCTTAGCTGCAAGTCTAATCCTTGGGAGGAAAAAAAAAAGAAAGCGTAATAAGGTTGGTTTCTTCTCCATCACTCCCATCACCTACCCACCTGATAACTCCTCTCCTCCTGCCGCCGCTGCTGCCACACTCCACCACTATCGTCGTCTTCTTATCACCCCTACCTCACCTGCAGTCCTGCACCAAGCAAGCAATCTCCAAAGTGCAAGCTTTCTCTTCTTCCTGCGTCTGGATCTCGCTCAGGTTTCTCCTCTGCCTGCCACTCCCCATGGCTCTGGATTCAGGTCGCTCTTCAGCATTCACTACCGTATTCACTTCTTGAAGGCCAATTTCTGGTTCCTCACCAAAGGCTTACCTGAGTTCTCTTACCTTGGCTGGGGTCATTGGTTCACTCTCAGGGATCTGGAACTTGCAACCAACTGTTTTTCAAAGGATAATGTAATTGGTGAGGGTGGATATGGTGTTGTCTACCGTGGCAGATTATCAAATGGCACCCCAGTGGCTGTCAAAAAAATCCTTAACAATCTAGGACAAGCTGAGAGAGAATTCAGAGTGGAAGTTGAAGCAATTGGTCATGTCCGACACAAGAATTTGGTTCGCCTTTTGGGGTACTGTGTTGAAGGCACTCAAAGCCTTGCTTACTTACATGAGGCAATTGAACCAAAAGTTGTGCATCGTGATATCAAGGCCAGTAATATATTGATTGATGATGAGTTTAACGCCAAAATATCTGACTTTGGTTTGGCCAAGATGCTAGGTGCTGGTAAAAGTCATATTGCTACTCGAGTTATGGGTACTTTTGGCTATGTCGCGCCTGAGTATGCTAACAGTGGACTTTTGAATGAAAAGAGTGATGTCTACAGTTTTGGGGTGGTTCTGCTGGAAGCTATTACAGGTAGAGATCCCATTGACTATGATCGCCCTACAGATGAGGTAAACCTAGTTGACTGGCTTAAAATGATGGTTGCCCACAGACGATCTGAAGAAGTTGTTGATCCAAACCTGGAGAGAAGACCATCGACAAAGGAGCTCAAACGTGCCCTTTTGACAGCTCTGAGGTGCATCGATTTGAATGCTGAGAAGAGACCAAGGATGGACCAGGTGGTCCGGATGTTGGACTCTAATGAACCCATTCCTCAAGAGGAAAGAAGACAACGACAGAACCACATCTCTAATAATTCAGAGACCGAGCCATTAAGAGGCAAGAGCAGCAGCGGCAAGAGTGATGCCCCTGAAAATGAGATGAGGCCACCTCGGTATAAGAATCGATCATTTCCCCCCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSDYRSHLWGFTANEKEAYSGENDERQQILQLIIEEKQPEILELPGGGIQVHQEIDAAVAELIEQEALDELEQLVKAQPEAAADQQNPVEPHQDEDDKLSLDNLLEQHRWEGALRRLTRMITPYFTIAGALRLMRSGNTAAAMRYYHDKIESIYSGDTGSAFVNGGVLKEIRDWVNAKRDTPLGEDEATTHMENTCHAIHDYLKLYFPAYRPQIGGKVRGHQVSRVWELGERLGKDDGRCLAASLILGRKKKRKRNKVGFFSITPITYPPDNSSPPAAAAATLHHYRRLLITPTSPAVLHQASNLQSASFLFFLRLDLAQVSPLPATPHGSGFRSLFSIHYRIHFLKANFWFLTKGLPEFSYLGWGHWFTLRDLELATNCFSKDNVIGEGGYGVVYRGRLSNGTPVAVKKILNNLGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQSLAYLHEAIEPKVVHRDIKASNILIDDEFNAKISDFGLAKMLGAGKSHIATRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRDPIDYDRPTDEVNLVDWLKMMVAHRRSEEVVDPNLERRPSTKELKRALLTALRCIDLNAEKRPRMDQVVRMLDSNEPIPQEERRQRQNHISNNSETEPLRGKSSSGKSDAPENEMRPPRYKNRSFPPK</aaseq>

Gene Sequence

<dnaseqindica>1..92#701..901#1027..1093#1418..1605#1727..1810#1982..2074#3174..3408#3496..3601#4689..4866#4979..5083#5680..5850#5991..6120#6265..6474#6841..6984#ATGAGTGATTATAGGTCTCATTTGTGGGGCTTCACCGCCAACGAGAAAGAGGCATACTCAGGAGAAAACGATGAACGCCAGCAGATCCTACAGTAAGTACATACGTACTAAACCTGATATACATAAGCAGTTAACTATATATATATATATATTAGTTAACTGCTTATGTATATCAGGTTTAGTACATATGTACTTACTATATACCTATATAGGATACCTATATGGGACTTTATGGTGCCCGGGTTCTAAGGTATAAAACACACAAATTCTCTCAAATTTTTAAAAAATTTTAAATTGTGAGTATATACCTAGGTATATGAATTTGATTCATACAAATACCTAACAACAAAACAACTCAAACTCAACTTTATTTCACAATTTATTATTACATACCTAACGAATTATATGTTTGGATGTTATACACCTAGAACTAAAATTGAACAAAAAAAATTTCAAACTCAGTTCAAAGTTGTTAGTAAAGAAGTTAATGTTCATATCTAAACATTTAAAAAAATTTCATACTCATTCAAATTGTGTATATACTCAATTTGAATCTTGGAGCCCATACTCCATGTAGCACCAGTTAATTTACCTATATATATACACACACGTACTGACATATATAAGCACTAAACTAATTGGAGTATTATATAGCAAGTTGAAAATGCATCAGTATGCTCTTTTACTTAATTATTTGCAGGTTGATAATAGAAGAGAAACAACCTGAGATCTTGGAATTGCCTGGCGGAGGGATACAAGTGCATCAGGAGATAGACGCTGCGGTTGCAGAGCTGATAGAACAAGAAGCCCTTGATGAATTAGAGCAACTGGTGAAAGCCCAACCAGAAGCCGCTGCAGATCAGCAAAATCCAGTTGAGCCACATCAAGATGAGGATGACAAGTGAGACTACTTGCATGCAAGCAGATTCATTCATATATTTGACATTCTAGCTAGTCAACTAAACGTTGCACCAGCTCACACCACAAAATTATATATAACCTCTTGGTTTCTACTACATGGTGCAGGCTGAGTTTGGATAATTTGTTGGAACAACATCGTTGGGAGGGAGCTCTGCGGCGGCTGACGCGCATGGTCCGTAATGGTGAAGCCATCAATGGCCCTGTACCTGACGCGCCACCCCAAGACATTTATGTTGCTCATCCCGAGATCGTTATTTTGCGAGTACCTAAGAACACCCACAATGGTTATCTATAGACTCTCTACAAGAGATCTATGTCAGCATATTTTCTTACATGGAAGATATTAAATGAAGAGAGAGAACAAAACTATCTACTAACTTAGAGATAATCTATAGAGAAAAACGAGGCAATGTATGAGAGATATAGATACCCATGTAGATATACTATTGAGATGACTATTAATCTAGTCTATTGCTAAGATATACATGTTTTATAGATAACACCTTACTTTACCATTGCGGGTGCTCTAAGGCTGATGCGTTCTGGCAATACTGCTGCTGCAATGCGCTATTATCATGACAAAATTGAGTCCATTTATTCAGGAGATACCGGAAGTGCCTTTGTCAACGGTGGTGTTTTGAAAGAAATCCGGGATTGGGTTAATGCAAAGAGAGATACTCCATTGTAAGTGTCACTTGGCTACTAGCACTCGATCTTTTCAGTTGTTAATAATCTTCCATATATAATAATTAATATAATTGCATTACGTGTGTGTTGTGCTGATAATTGATCTGTGTTGTTGCAGGGGAGAAGATGAAGCTACGACCCATATGGAGAACACCTGCCATGCGATCCATGACTATTTGAAGCTTTATTTCCCGGCATACAGGTAATTAAACTTAATTTGTTGCATTGAATTAACTAACATGCTCCTCTGCCTATTGCAATATACTAGTACTGCACGCACACAACAATTGATTGTTTAATACTAATTAATTAGTGTAGTGTTCTCATTGTCACTTATGATCGATTTATAAACTAGTAAACACTGAATTTGCAGGCCACAAATTGGGGGAAAGGTTAGAGGTCACCAAGTAAGCAGGGTCTGGGAGCTTGGGGAGAGGCTTGGAAAAGATGACGGCCGCTGCTTAGCGTGCCACAAGAGAGTTAAGGGGTTCAATGTGACCAAACTCCAGAATCACCTGCAAGGATCGGTTAAAAGGCAAGGAATACAATGCCCGGCAATCAACAACTACATCCTGAGCAGGCTCGAACGGATTTTGAAAGAAATGAACGAAGATCAATAAGAACAAATTAAATTGAACTTTTATATGTGTATGCTAAATTTAACTTCTACAAATTACAACAAAAAGAATATATTAAATTGAAAATAGTTAACATATATTCACGGTTATATTTGTTAACATTGTAGAATTTGAATTTGACCTTGCTTGCATGTTTGTGGAGTGATATTTTTCATATTAATCTATCTGGTCAATTTTATAAAATTTTTAATGGCTATTTAAGTGATATGCAAGAAACGAGGGATGAAAATACACTTTCTCAAATCCTTCTCCCTTTTCTTCTCCATCCTAGCATGCATATTGGTATATGTTAGACATAAATACAAGGCATATATGTAAAGCCACATATTTTTTATTGGGCTCTAATGCAAACTAGAAAGAAAAAATTAATACTATTGTCCTTATAAATTAGGAATATAGTATTAAGTTTTCCTTTATTAGTTTGCATTAGAGCCCAATAAAAACAAAGTGGCGGAGTTCTTGGTCAGATCAAGCGGTCACCTTTGCTCCGCCGCTATCATTTTACTATCGGTAGTTGTTAATAAATTAGTCGATCACTCGAAAACACGTTATTAATCCGTTTGGGCTCGCTCCTTATAAATCTCACAGCGCGAGTACGTCATCTCAAAATAATAAAAAGAAAAAAAAGAAAAAGAAAGAAAACACACACAGCGCGACTGCGCGAGGTCCAGCAGGGAAGCCGGCCGCGTCGGCAGAGACTCCAGCCAACGGGCGCCGCCGCAGCCTCCGCCAGTCGGCAGTGGGAGCAGGCAGAAGCTGCAGCGGGGGGCCTCGAGCAGGTGGCGGCCTCAAGCGGAGGCGAGCAATCTCAGGGAAACCAAGCTCGCCGCCGTCGTACCCATTCTTCCGTCGCAGATTTCGCTGTGACTGGTTCCTTGTGATTGAATCCATAGGAACGGAACCCAAATCTTGGAATTGTTTTTGCAGTGCAAGTCTAATCCTTGGGAGGAAAAAAAAAAGAAAGCGTAATAAGGTTGGTTTCTTCTCCATCACTCCCATCACCTACCCACCTGATAACTCCTCTCCTCCTGCCGCCGCTGCTGCCACACTCCACCACTATCGTCGTCTTCTTATCACCCCTACCTCACCTGCAGTCCTGCACCAAGCAAGCAATCTCCAAAGTGCAAGCTTTCTCTTCTTCCTGCGTCTGGATCTCGCTCAGGTATGCGTCCACATTTGCTTTCTTCTTCCTCCATTCCCATTCCCCCCTACTCTCAGATGCGTGGATACCCCTTCCTCTGATCTACAGGTTTCTCCTCTGCCTGCCACTCCCCATGGCTCTGGATTCAGGTCGCTCTTCAGCATTCACTACCGTATTCACTTCTTGAAGGCCAATTTCTGGTTCCTCACCAAAGGTTGGTTACTCTTTCTTTCTTTCTTGTCATCCACTCCAAGTTGACTGCCTCTGTAAATATTCTATCTTTCCAACTGTTGCAATGGTAGCCCATATTTACTAGTATTTTTTCCCTTGGTAAGATCTAGTGGCCAATTTAACTTACATCTTCAAACGCCTGTAATCATCTATGTCAATTAATTATGTCAACCTGTAGCTGTTCGATTCTGAACAATAAGTGGGAACGGTAGTTGACAGGTCAGACCTGCTTCATTGATAATTGATACTGTCCAAATGGCGATGTGTTGTCTTGAACTCATGGTCATTATCTGGTTGCTACCATGTAGCTTTCTCATGACCACTAGTGTTGCCGACTCAACGAGTTGTAGTGTTCCTGACCATTCTGTTAAACATTCATGCCTTGTCTTTGTGGCAACACTAAGAACATTTGATCGGCTAGCAAGCTTATATGTACGTAACTCTTTTTGATTATTTCTTTCTACTTTACTGTCATGGCATGTGTTATATGCTGTTGCAGAAATGCACTCCTTTTATGTTTGAGGGAATGGTGATTTGCATTTGTGAGTGACATGTTCTTATCTTCCCCATCTAGGTACTTGATGATCCGAAGATGTCATCAAACTCCACTCTGACAGATTCTCTTCATGAGAGAACAATTGTTTTTGGCCTGAAACTTTGGGTTGTAATTGGGATATCTGTTGGAGCATCCCTACTTGGTGTTCTTCTCATACTTATTGTATGCCTCACCTTACAAACTTGGATCAAACGGTCACGTAGGACATTCAAGGAAATTCCAATTACCCAAATACCTTCTGCATCCAAAGATATCAAGGAAGTGAGGGCAGTGGACGAATTTTTGCCCAATGATTTCGTTGTACATGATGGGCTTCTACTCGCCATTCAGAATGAACCTGTTGAACCAGTGGATAAAGATGTGAATCAGTTTGCTCAAGAGGACAAGACGATACAAGGAGAAGAAAACAGTCCTGTTCCTCTTCATTACGTGGACAACTATGATGTAATTCAATCTGTTTCCACATGTGAACAGTCTTCCTCGCATGCTCCCGTCGACTCTGTTCTGTTGCCAGGCTTACCTGAGTTCTCTTACCTTGGCTGGGGTCATTGGTTCACTCTCAGGGATCTGGAACTTGCAACCAACTGTTTTTCAAAGGATAATGTAATTGGTGAGGGTGGATATGGTGTTGTCTACCGTGGCAGATTATCAAATGGCACCCCAGTGGCTGTCAAAAAAATCCTTAACAATCTGTGAGTATTTTTCGTTTTTTCTTATAACAATTCTTTGGTGATGCAGTGGCAGTGCATTGGTTAGTTTGTTGTCCTTCCTTTTACTTAAGCTATGACCACTTGCCTTGGGCAGAGGACAAGCTGAGAGAGAATTCAGAGTGGAAGTTGAAGCAATTGGTCATGTCCGACACAAGAATTTGGTTCGCCTTTTGGGGTACTGTGTTGAAGGCACTCAAAGGTATGGGTATTATTAGGATTCATTGCTTAGACTATGACCTGTTGTGTCTCAACTGAAATTGTTTGTTGTGCGTTGATAATCAGGATGCTTGTGTATGAGTATGTCAACAATGGGAATCTCGAAAGTTGGTTACATGGAGAGTTATCCCAATATAGTTCTCTCACTTGGCTAGCGCGCATGAAAATTCTTTTGGGTACTGCAAAGGCGTGAGTAACTCCATCACTGAGTCTAATCTATTGCTTCTTGTGGATTCAAATGTCCATTCTAGATCAATTGTTTGCTGTCAACATTGTATTTGTGATTTTGCGTGGTGCAAACTGTGAACTGATTGGATCTATATCTATTCCATTAAATGCCTTAGAACTAAAAATGTCGCCTTCTGATTGATTCACACAAGCACATCCAGTCTTGATAGCTGCTCTATTAAAAACTGTTGTGCATGTTACAATCTTGACAGCTTTGTGATTAAAGGCTTACTAGTCAGTACTGTTCACAAGTAGTCGTTGTCTATACTATCATGAATATAAAACAAGTATAGATTGTATCATCTTACTGCTTGGTAAATACTAATTTTGTACGAACCACCACATTTGCAGCCTTGCTTACTTACATGAGGCAATTGAACCAAAAGTTGTGCATCGTGATATCAAGGCCAGTAATATATTGATTGATGATGAGTTTAACGCCAAAATATCTGACTTTGGTTTGGCCAAGATGCTAGGTGCTGGTAAAAGTCATATTGCTACTCGAGTTATGGGTACTTTTGGGTAAGTTTTTCATGCCTTTGTATAATAAATTGAGGCATGTTCTCTTTGTATTACGTTCAAATCTTGGCCACTGTAATTTCAGAAAAATTCTGTTGGTGCTAATCACTAATGGTACTCAACATTGTGTTATTATTTTGCAGCTATGTCGCGCCTGAGTATGCTAACAGTGGACTTTTGAATGAAAAGAGTGATGTCTACAGTTTTGGGGTGGTTCTGCTGGAAGCTATTACAGGTAGAGATCCCATTGACTATGATCGCCCTACAGATGAGGTAATACTTGTTGATTTTTTTTCTGTATTGTTCAGTACCAAGTTATTACATAAAAGCATGCAACTACAATCACTTGTTAAGCAATCAAGAAGCTATGAACTTATGATTTGACAAGTACTGTAACACACTACTGATCTTTTGTAGGTAAACCTAGTTGACTGGCTTAAAATGATGGTTGCCCACAGACGATCTGAAGAAGTTGTTGATCCAAACCTGGAGAGAAGACCATCGACAAAGGAGCTCAAACGTGCCCTTTTGACAGCTCTGAGGTGCATCGATTTGAATGCTGAGAAGAGACCAAGGATGGACCAGGTGGTCCGGATGTTGGACTCTAATGAACCCATTCCTCAAGAGGTTTGATTCGTTTCAAAAATAAATGTGCATACATATATATCATATAGCTGTGTGCATATCAGATGCAAAGGCTGTAGCTCTAAACTCTTCCTTTACCTAAAGAGTACGATTAGTGATTTACCTGGAAATCATGCATATTCGTGCTATATTGTGTTATAAGTACATCCAATGTTCATCTCACAGTAAAATTAGTGACAGATGGACAACATGAGCAATCCTATTTGATTGTATCCTATATACCTGTCTTATCAGCATTATCGGACATAAAGAGCATTGCATAACATGGTATTAATGTCTACCATAAGGAAATCATGGCTTTATTCTGTCATTGCCTCATGAATTAAACACATGTCAATTGATTTGCAGGAAAGAAGACAACGACAGAACCACATCTCTAATAATTCAGAGACCGAGCCATTAAGAGGCAAGAGCAGCAGCGGCAAGAGTGATGCCCCTGAAAATGAGATGAGGCCACCTCGGTATAAGAATCGATCATTTCCCCCCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034640