Os06g0494000

From RiceWiki
Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0494000| Description = Conserved hypothetical protein| Version = NM_001064220.1 GI:115468171 GeneID:4341091| Length = 3687 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0494000

Description

Conserved hypothetical protein

Version

NM_001064220.1 GI:115468171 GeneID:4341091

Length

3687 bp

Definition

Oryza sativa Japonica Group Os06g0494000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18033160..18036846

Sequence Coding Region

18034444..18034527,18036253..18036333,18036447..18036629

Expression

GEO Profiles:Os06g0494000

Genome Context

<gbrowseImage1> name=NC_008399:18033160..18036846 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18033160..18036846 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgttgagctgtctgggctccatgtctaagtgggaaccagtcacatttgaggaatctctttgctttgtcaagaaagttaaggctcgtgattatgtgttgtacttgtcgctgcttgatgtgctcagtcgaaatgagcagatccctctggaagcttacagcgagctttcacttcttttccgggatcacgacgatctgctggaagagctagcgaagttcagaccccttcctaccccaagcacagtttatagccacagctcagtctggctgctcttcttcctaatgcccctccttgtcctaagcattctcctcaagtgcttccttcttcaacagccagttgcaagctga</cdnaseq>

Protein Sequence

<aaseq>MVLSCLGSMSKWEPVTFEESLCFVKKVKARDYVLYLSLLDVLSR NEQIPLEAYSELSLLFRDHDDLLEELAKFRPLPTPSTVYSHSSVWLLFFLMPLLVLSI LLKCFLLQQPVAS</aaseq>

Gene Sequence

<dnaseqindica>1285..1368#3094..3174#3288..3470#tttcccatcctgcctcaaagataggttcttgacgggggaaggaaagctgctcgcctccgctgcacagctcgtctgctcgcctggtgaggaaaaatccctcttttttctttttcttttttttttcaagaacccatgtaggtgtagttctttgttactgcttactactagtcctgaaggaatgtgtctgtcttgtcgagggatgcggtattgtaagccggtttagaggtatcgctcttggtttgtactatctatttttcacttgccgtagaagctgcagaaaaaatggtactttttgttgggggtgtgatgactgatgatggggttggccggagatgttcccgagattgccaagccctttttttacttcttcttcttcttgtgcttgtttgtagtggagtagtaatttgtagctagctagctttgtttcgtggaattacccccccccctccaaggctgaacccatttgggcatttcttaaatttagttgtggttttttttattgtcaatttcgtcaccccttagtttgaactgctccttctccacctactacatgatcttgactttaacgatgcaacctctgttggaaaattgagctgtctgaaccatttcaaagcatttaatttcatatagcaaatccacgtcatgctgattcagatgcaactttcagtttcttggtaaaatttcaggatcagttttgtattcgtaggcatcttaatttcaaaacatttatgagatttcccacccttgggctattgagtcccccttttgttaggaaacagtcttgtccttccataaagcaaaattgttagttttgactattcagaacactcctttagttcataggctttgtcctctgccattgtgtacttgttgaggaactaccctctcttcttcctcctggtgttagaggtgataatttttgggaggattcagtcatttcgctagtgctaattccttcaaaatctatagtaaattaaactattgaacttccttttctttttggttgtccatccttattgggcatcttgttttgctgacttattttcccattagaagctacgatctcataaaattccattttaattctgtgagatgaagtcttatggatgatattttctaaaatgaataattcttatcttcgataaaaaaaatgacttgctttttgtggagctgtaatggtttttaaaattgtccactttcagtatcacattgtaaacttcactttaacaaactattccatgcaggaagcacggaaattatgtctcattaaagggaatccagggtatggtgttgagctgtctgggctccatgtctaagtgggaaccagtcacatttgaggaatctctttgctttgtcaagaaagttaaggtgataaaatttttcaagattccttctccagttttcactcatttctgtagattacatgttgtatttctttcacaagtcataacagttacagcaatccgtaagatgggtggagaaacaccagtttcatagtcaatacatctgccaaaatctcttcagtgtgatggacagttcatcatctggagtgcatagcaagaaatttcctttcactcattttcaatcattaggtgaactgtttatcttggctagttgtcagcaatcaattgaaaccggagatgcttccatttcttaaaagaaaaagttgacagcaatcattcgatgatttggatctgaagcacaaatatttgatgaaactgattgagcctacccctgtgacaaaagaatcattatttgtttcgctgtttcatctccttccttccagctagtattaaattggcaaattatatattttatcttgcctttagcatgataggtcatgtgctatatgttccttcatgtgatttaatttttgtgatatatatcttcttatattgttgtatcattagtcctgatagctctttactatcattttctgttttctaggttgtaatgttttgcatgtagaggcctgtttgactctccaacttggtttagctttttagcagcacgtaaaacgagataaaccattagcacatgaataattgagtattaattattacaaacttcaaagagataatccaagaaatgccattgacaagcgttcaaatcccagaaatgccatcgacaagtgtgagttccaagaaatgccatcgtacaaacgactttgtcccaaaaatgacatcgccgttagggttccgttcattccgcgccgttaagttctataagatgaacagtgtattgtacaaacgactttgtcccaaaaatgccatcgccgttagggttccatccattccgcgccgttaagttctataagatgaacagtgtatttaacggcgtaaaatgaacggaaccctaacggcgatgtcatttttgggacaaagtcgtttgtacgatggcatttcttggaactcacacttgtcgatggcatttctaggacttggacgcttgttaatggcatttcttggattatctcaacttgaaaaatgggtttatttgatttttaaaagaaacttttatataaaattttttgtagaaaatgcaccattaacaatttgaaaagcgtgctaacggaaaagctaaaggaaaacgaggaagttgtagtttggagtcgaagaaaagaacgaggcacattttaggttgtaacgttttgcacttggttagctgtcagcatgatctaggcaggctagtactactactgatccatgcttttcctggaaggagtacagaaaatccaaggcaaatatagttattacaacagattggaacatctgtgatttaagttgggaaacgaaatatctgaactattaaaaaattgaagtcatgaacatttaggaaatttctttactttttcaagacataaatattgaatctcctcagtaactcctatatgggatacagcagcaatgcacagtaataaaaaaaaccaaagctaaagtatttagaatgatattgagcatattaacctgtagtaaaattgttttatatattatagtaagctattgacccactaaagggatacaatgtttgctcagtctctgctgaaatgaatattgcagtgattcttgttattgaattgtgttgtttatgcaggctcgtgattatgtgttgtacttgtcgctgcttgatgtgctcagtcgaaatgagcagatccctctggaagcttacagcgaggtaccagaactaaaaacccaccctttctctcatgagaaatttcatcatagatctgtagcttcttaatccatcataaatcacaatcactttgatccgttctgtttcgagtgcagctttcacttcttttccgggatcacgacgatctgctggaagagctagcgaagttcagaccccttcctaccccaagcacagtttatagccacagctcagtctggctgctcttcttcctaatgcccctccttgtcctaagcattctcctcaagtgcttccttcttcaacagccagttgcaagctgaaaaagatcaagcgtgcaatgtcatgtgatatctctgttaaaagccaaagcgtctttgtggcgatgtctcgctgtttatattggagatatctccgtgtactgatgcaaggaagtagcctcttagcttggaagagcgccaatacatggtaaaaacagtattgttttgacttgctgaaaaagaaaaatcactattcaggaaatgagatgaattgcccagc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0494000, RefSeq:Os06g0494000