Os06g0495800

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Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0495800| Description = Protein of unknown function DUF617, plant family protein| Version = NM_001064227.2 GI:297605862 GeneID:4341098| Leng...")
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Gene Name

Os06g0495800

Description

Protein of unknown function DUF617, plant family protein

Version

NM_001064227.2 GI:297605862 GeneID:4341098

Length

1579 bp

Definition

Oryza sativa Japonica Group Os06g0495800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18161750..18163328

Sequence Coding Region

18162052..18163134

Expression

GEO Profiles:Os06g0495800

Genome Context

<gbrowseImage1> name=NC_008399:18161750..18163328 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18161750..18163328 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgtcatggaaacaaggcccctctccccgcgagcctcgccgctcccctcctccgccaagagccccgccggcggcggcggcggaggcggcggcggtggcttccagtggctgttcgggaagcgcggcaggaggaacagggcgcggcagccgctggcggcgcagctgggacccggcgacgacgacggcgaggaggtggaggacgaggaggacttcttcttcgtgtccacgccctacctgtccacgccgtcgtggtccgccgccgccgccgccgccggggcgtcgccgaggaagagaggggatcatcaggcggcgctggcgcggctgcgggcggctgtgctgtccgtgctggcgcgcgcgcggcgaggcggccgacgcgcggggggcgggtcgtcggcgtcggcgcgggtgctcaccggcaccgtcttcggccggctccgcggccgcgtgcacctcgcgctgcagaccgacccgcgcgccgcgccggcgatgatgctcgagctcgccggctactccaccggcgcgctcgtcagggagatggcctccggcctcgtccgcctcgccctcgagtgcgagaaggcggcgccgccgaccaacccaggtacgtacacaaactcctcctgttcccacccccccatggtgttcgtcctgtgttcacgcacgcatcgatcgatcattcgcaggcgagaagcggcggcgggcggcgctgatggaggagacgacgtggcgggcgtactgcaacgggcgcaagtgcgggtacgcggtgcgccgcgagtgcggcgccgaggagtggcgcgtgctgcgcgccgtcgagccggtcaccgtcggcgccggcgtgctccccgacggtggcggcgttgccggcggcgagggggacatgatgtacatgagagcgaggttcgagagggtggtggggtcgagggactcggaggcgttctacatggtcagccccgacggcaacgccggcccggagctcagcatctacctcctcagagtttgatcgatcgagcttcacatccattattcatggcgcctagggctagggcaacgaggatcgatgacgaaagtgtcaactatgtgtga</cdnaseq>

Protein Sequence

<aaseq>MSVMETRPLSPRASPLPSSAKSPAGGGGGGGGGGFQWLFGKRGR RNRARQPLAAQLGPGDDDGEEVEDEEDFFFVSTPYLSTPSWSAAAAAAGASPRKRGDH QAALARLRAAVLSVLARARRGGRRAGGGSSASARVLTGTVFGRLRGRVHLALQTDPRA APAMMLELAGYSTGALVREMASGLVRLALECEKAAPPTNPGTYTNSSCSHPPMVFVLC SRTHRSIIRRREAAAGGADGGDDVAGVLQRAQVRVRGAPRVRRRGVARAARRRAGHRR RRRAPRRWRRCRRRGGHDVHESEVREGGGVEGLGGVLHGQPRRQRRPGAQHLPPQSLI DRASHPLFMAPRARATRIDDESVNYV</aaseq>

Gene Sequence

<dnaseqindica>303..1385#tgcctgccaaaagcacttctcgccctaaacctaagagctcaaagttttcctaaacactttggatttttgtagttataaaatctagaaaataaactagaattcagaagctaggtttttcggcttctgtgaattctcgtaggctactaacaagctgcttcttagcctacactcagattcttgtgccaaaagctgctacctacctagctaagcctaagctaagctccctcctgcttcttcatatattgtggtttggtttgcatcttgccgcgtaaactaccacactagtgtgcatccatgcacgcatgagcgtcatggaaacaaggcccctctccccgcgagcctcgccgctcccctcctccgccaagagccccgccggcggcggcggcggaggcggcggcggtggcttccagtggctgttcgggaagcgcggcaggaggaacagggcgcggcagccgctggcggcgcagctgggacccggcgacgacgacggcgaggaggtggaggacgaggaggacttcttcttcgtgtccacgccctacctgtccacgccgtcgtggtccgccgccgccgccgccgccggggcgtcgccgaggaagagaggggatcatcaggcggcgctggcgcggctgcgggcggctgtgctgtccgtgctggcgcgcgcgcggcgaggcggccgacgcgcggggggcgggtcgtcggcgtcggcgcgggtgctcaccggcaccgtcttcggccggctccgcggccgcgtgcacctcgcgctgcagaccgacccgcgcgccgcgccggcgatgatgctcgagctcgccggctactccaccggcgcgctcgtcagggagatggcctccggcctcgtccgcctcgccctcgagtgcgagaaggcggcgccgccgaccaacccaggtacgtacacaaactcctcctgttcccacccccccatggtgttcgtcctgtgttcacgcacgcatcgatcgatcattcgcaggcgagaagcggcggcgggcggcgctgatggaggagacgacgtggcgggcgtactgcaacgggcgcaagtgcgggtacgcggtgcgccgcgagtgcggcgccgaggagtggcgcgtgctgcgcgccgtcgagccggtcaccgtcggcgccggcgtgctccccgacggtggcggcgttgccggcggcgagggggacatgatgtacatgagagcgaggttcgagagggtggtggggtcgagggactcggaggcgttctacatggtcagccccgacggcaacgccggcccggagctcagcatctacctcctcagagtttgatcgatcgagcttcacatccattattcatggcgcctagggctagggcaacgaggatcgatgacgaaagtgtcaactatgtgtgatgtcagcacgttggtacgtggttagtagagccatagctatgtaggaatctgtgttgctgtgcttacgcatggtgtcctatatatatatgggttgttcatgttaatttggtcgtttggttatgtgaaatatatagccgggcggtggcttgacgatgatgatgttgctgctgctactgcaacctctgtttcaaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0495800, RefSeq:Os06g0495800