Os06g0496000

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Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0496000| Description = Conserved hypothetical protein| Version = NM_001064228.1 GI:115468187 GeneID:4341099| Length = 7339 bp| Definition ...")
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Gene Name

Os06g0496000

Description

Conserved hypothetical protein

Version

NM_001064228.1 GI:115468187 GeneID:4341099

Length

7339 bp

Definition

Oryza sativa Japonica Group Os06g0496000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18188255..18195593

Sequence Coding Region

18188343..18188472,18190851..18190951,18191371..18191439,18191550..18192797,18192936..18193013
,18194620..18194802,18194879..18194989,18195074..18195226

Expression

GEO Profiles:Os06g0496000

Genome Context

<gbrowseImage1> name=NC_008399:18188255..18195593 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18188255..18195593 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcgccggagtcgtacatcgggagcgtgataagcctcacgtcgaagagcgagatccggtacgagggcgtcctctacaccatcaacaccgaggagtccagcatcgggctcaggaacgttcgctcatttggaactgaaggtcgtaagaaggatggtcaacagattccagccagtgacaagatatatgaatacatactatttagaggaagtgatataaaggatttacaagtcaaatcctctccaccagctcagcctactactttacacaacgatccagcgattatccagtcacattatccttgtcctgcctctacgagcttaccgcctcctgcaagcacagcagctgatcctgcctcacacaatggtcagtcaggaattcagatgcctccaccattgccccaatttcaacctggggccagtttaccatcatggaactcatcacctatgccatcatctgcaaatggcgctcctgctagcacaacaacagctgatcctggctcacacaatggtcagtcaggaattcagatgccaccaccgttgccccaatatcaacctggggccagtttaccgtcatggaactcatcacctatgccatcatctgcaaatggtgctggccttactatgccaccaatgtactggccaggattttatacaccaccaagtgggtttcctcatttgcaacaaccgccctttcttcgtccaccacatggcttgacaattccacaggccttgcagcagcccatacagtatcctggacttaatgcacctttaccaccttttcctagaatgccagagtttgctttaccacaacctggtagtggtaataacttgacccagaatctaggtgtatccacatcaatgccggtccctgccttatcaagtactccagcaactgaatcatctgcaaaccagcttccaaatatgctgtcatctgtttctgctagtgtattctctctgggtttaactcccccatctgttaatccgccagtctctacaattgaatcgactatgtcccaatcgcaaggcatctctcctctgatgaacaataagccagtctcacttcctcttgactctactgtaccatctgccagcagtaataagcctatgaatatacctgtgccaacctatctaccttcctctcagccaccattggctaatattgcagcaagtgcagccactgttgcagaaccagttacattggtcactcctggccaacttctaccaaccatttcatctacagtcctttcggctgatgccttggaaacagcttcagctatgattccatcccctaaggctgcctcctctatggtctcatcctctcaggctgccttggctgcatcctctcaggttacttcctctgtagtttcaccctcagaggatcaatttgcttcctcacctgttccatcacatcaacagctggagcaaaacaatgaagataggcacaccaagaaacctgaatggaaggctaaacaacactctgttgctccatccaacaaggaacccctgttgccagcacctaagcctactcttcagaagcctgttggagcttcctcatacattcaatacaacaatagaggccgaggaagaggaagaggccgaggaagaggaattgggcaatcacgtcctataaccaagtttacagaggacttcgatttcatggcaatgaatgagaagtttaacaaagatgaagtatggggccatctcggtaaaagcaaaggacagttgaacgatgatcctaatgagtatgaagatgatgttctagaagatgatatttctcctgggaagccagaagttaagcctgtatatgtcaaagatgacttctttgattcactgtcatgcaataccattgataatggaggggggaatggaagaatcaaattctcggagcagagaaaaatagacacagagacttttggtgattctgcaaggcatcggcccatgggcatgcgtggaggagggaggggtccccgtggtggaccccgtggacgtggttactatgggagggggtatggatatatgggaagggggcgcggctactcctacccaaaccaccaatcttag</cdnaseq>

Protein Sequence

<aaseq>MAAAAAPESYIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNV RSFGTEGRKKDGQQIPASDKIYEYILFRGSDIKDLQVKSSPPAQPTTLHNDPAIIQSH YPCPASTSLPPPASTAADPASHNGQSGIQMPPPLPQFQPGASLPSWNSSPMPSSANGA PASTTTADPGSHNGQSGIQMPPPLPQYQPGASLPSWNSSPMPSSANGAGLTMPPMYWP GFYTPPSGFPHLQQPPFLRPPHGLTIPQALQQPIQYPGLNAPLPPFPRMPEFALPQPG SGNNLTQNLGVSTSMPVPALSSTPATESSANQLPNMLSSVSASVFSLGLTPPSVNPPV STIESTMSQSQGISPLMNNKPVSLPLDSTVPSASSNKPMNIPVPTYLPSSQPPLANIA ASAATVAEPVTLVTPGQLLPTISSTVLSADALETASAMIPSPKAASSMVSSSQAALAA SSQVTSSVVSPSEDQFASSPVPSHQQLEQNNEDRHTKKPEWKAKQHSVAPSNKEPLLP APKPTLQKPVGASSYIQYNNRGRGRGRGRGRGIGQSRPITKFTEDFDFMAMNEKFNKD EVWGHLGKSKGQLNDDPNEYEDDVLEDDISPGKPEVKPVYVKDDFFDSLSCNTIDNGG GNGRIKFSEQRKIDTETFGDSARHRPMGMRGGGRGPRGGPRGRGYYGRGYGYMGRGRG YSYPNHQS</aaseq>

Gene Sequence

<dnaseqindica>89..218#2597..2697#3117..3185#3296..4543#4682..4759#6366..6548#6625..6735#6820..6972#gaggagaaattgggagagaaaaaagaaacccacactagtgaagggagagaggggggatcgaaaccctagggcggcgagctcggcggcgatggcggcggcggcggcgccggagtcgtacatcgggagcgtgataagcctcacgtcgaagagcgagatccggtacgagggcgtcctctacaccatcaacaccgaggagtccagcatcgggctcaggaacggttaggctcctccctcccgagctcttccccctcctcctcccgcctcccctggttgggccgcgtcggcgatctgtgggagagggtgtgtgtgtgtgccgcgtcgccgtggaattatggattcgctgtttttctttcctgtttgcttagcttcctgttgctatgggtgcatataatctcgaatcatctatgcaggattaccgtatggttgggggtctagctcattttttttttgcaaggattgtatgctcttagttctcgattacactgtggactagtcatctttgttgtgcgatgcgagctagaatttagaatctaacagcgtgggtaaagatctgggaccggatgctgaacagttccacttgtacttggttaattttgtgttcttctgtggaggtggagtaaacagcgtgggctgtggtctacagcgactaggtattgttggtgggggattactcttcttaacggcctaacaacctagttttgttattaatgatgggaagtccttttgtgataacccattcatagcaatccgaattcaagtagtgtagcattcagtgccttcttgccaaatcgttggcggtcttaagttgggtaatgtcgttgtacatctgaaagaggctagggatctttccctgtttggaatatatagttgaacccgagaatgatgcatgtgggaaggtgccattgcggtaggtgctttgccaaactttctattgtgagctattggtaggaaatgtttccctctgacagttgtctctttcaagctattcttattattactattgatgtgttggtgatgctgtgtcttgacctgtatcatataactcaatgacccaatcctgcagacaacctttccatgcaaaactcactgactgatgtgggcatttgttatttttgtaagggtttgcatgttccattacacagccaatcatatattttctgtttcttaactgacttggagatgttacttcgtcaaacaatcaacggtttctgtttttagataagatcctgttttcaacattgggtattggtgtgtgacctaatattatctgataacttttcaatgcgtggaatgcaatcggatatggtttttacaggaagttttacaccttgataatattttcttttcttattccgttaatatttcaatccaagcttaactttcataccacattcaaatctgaaaaaagcaatacttcaatatatggctaatctgaacagtgcagtttgccaataagaattggcaatttcatgtaatttacctgaggtttttgcttgcagatttgattttctattttttctttccacaaatttagaatttaacatatattgtaatttggtccctatgtgtatgtagtacagcaccaaattcttgttagaataatagtgatttttggatttgatctgaatttttggttcaaaatgttgatatggaaccttgtagggccattatttgtcatattttactggttgcaaccctgacgttaatgtaagctggggatgagctgaatagtctactccccccttctgcttctccttgttcccatctctttctgcatacttgtatcattctagctctctatgcaacactgtgtattctactattccgatagctactaacatccttctgtacgatgaggacatggccattgtttcatttgttatgtggagaggctagtcaaaagggccttgatgtctgtttgacatcatttttgctttgttttggattttccatagaaagatcatttgtgcaagtaggatatcatagcagacataatttatgagcagtgttgcagatgctccatatatttctctaggaaagtgaaatgaagctttatccgtggcttatattcccaaagttctaaatgttttagttaaaacactagaaaatagacgtggctttgccgcataatagaccagccagtatgaaatactccatccgtttcatcgtgggtggcggaggatccggtgggcggcgaggcgtgcatcggccatcgggaggagggatgggtggattaggggtcgagcgcttttgtgaaaaaaaaattcaagcttcgttggtccatcgcagcgaactttcggggagcaaggagacacgtggcagatttttggggaggggaagcttaatttctaggacgccacgtggcgtaatctccggccagggatagagccctgaaattggtattagagatttgaaacttaacttgaagtaagttaaaaaattgttaccacaaaaatgtatttttttctctctaatcttatgatttgagtatccatgggtgtttgatattttcctgtgaccttaagaagagatgctgttctcatgttcgtgtgcatgatattattctcactgagtgcttcactgtactgttttgcagttcgctcatttggaactgaaggtcgtaagaaggatggtcaacagattccagccagtgacaagatatatgaatacatactatttagaggaagtgatataaaggtaatgctggtaaatcagaaacattactaaaacactaaataaatctgtgattattgttgaattattgatccaatgatttggcctgttatacagtatagtaggatcaacttttggattgtaatatcgtacttttggatcattattttctattgcttaattttggtcacatacaagatgtggattaggattatcccattgaataatagtatttggaaaatatgtgactcattggggtccagtgatcacattttttttttgtcaagttctccgaaacctttatttaatcctgatacaaactttttctttcttgctgatttactgtcactgtttacatttttgtcttgctctgtttgttcatcttgttgtattacactggcaatcccctttcctatgtcttagctttgattgctccactgcaggatttacaagtcaaatcctctccaccagctcagcctactactttacacaacgatccagcgattatccaggtaaatatacataaaatgttaggcatcttttggaaggatgctggatctatttcttttgaagaatggtttgatattttagatgatgaatctttgctcactattttgtgtagtcacattatccttgtcctgcctctacgagcttaccgcctcctgcaagcacagcagctgatcctgcctcacacaatggtcagtcaggaattcagatgcctccaccattgccccaatttcaacctggggccagtttaccatcatggaactcatcacctatgccatcatctgcaaatggcgctcctgctagcacaacaacagctgatcctggctcacacaatggtcagtcaggaattcagatgccaccaccgttgccccaatatcaacctggggccagtttaccgtcatggaactcatcacctatgccatcatctgcaaatggtgctggccttactatgccaccaatgtactggccaggattttatacaccaccaagtgggtttcctcatttgcaacaaccgccctttcttcgtccaccacatggcttgacaattccacaggccttgcagcagcccatacagtatcctggacttaatgcacctttaccaccttttcctagaatgccagagtttgctttaccacaacctggtagtggtaataacttgacccagaatctaggtgtatccacatcaatgccggtccctgccttatcaagtactccagcaactgaatcatctgcaaaccagcttccaaatatgctgtcatctgtttctgctagtgtattctctctgggtttaactcccccatctgttaatccgccagtctctacaattgaatcgactatgtcccaatcgcaaggcatctctcctctgatgaacaataagccagtctcacttcctcttgactctactgtaccatctgccagcagtaataagcctatgaatatacctgtgccaacctatctaccttcctctcagccaccattggctaatattgcagcaagtgcagccactgttgcagaaccagttacattggtcactcctggccaacttctaccaaccatttcatctacagtcctttcggctgatgccttggaaacagcttcagctatgattccatcccctaaggctgcctcctctatggtctcatcctctcaggctgccttggctgcatcctctcaggttacttcctctgtagtttcaccctcagaggatcaatttgcttcctcacctgttccatcacatcaacagctggagcaaaacaatgaagataggcacaccaagaaacctgaatggaaggctaaacaacactctgttgctccatccaacaaggaacccctgttgccagcacctaagcctactcttcagaaggtaatagcatactaaatttaatttttattacacaagtacaagggaagattatttttggtaccattatttccatactcagttaatgtgcgcgatttgtatactctgtaattagtcccattttcaatcctttggtttcagcctgttggagcttcctcatacattcaatacaacaatagaggccgaggaagaggaagaggccgaggaagaggaattggggtatggtatctaaaacatgttttatacgccttcaactgttcaaatgtagaaatccttaatggctaaaacattcttggattattttccctgtttggtactgttaccatgtttggctactgctcccatgttagtattcttctggatttgattgtactccctctgtttgaaaatataaggtgtccttgttttccacaaagtcagcatttaaaatttttgactatctgaaaatattttcatgcgatattaattttgtagttattgataatatattatgaaagaaattaatgtcaaagtataatgttggagactatttagaaacctaatacgccttatattttcaaatggagggagtaatgtttagtactggttctattcacctctcttctctgggtatcattctgtacggtattgtggatgcccttttctgatgttcgtcatgtaggacagtattctcaacattattattttcaaattccaagatgctaggtgtgcaatactgatgtaggacaatcatctattgatgtccagtcatcagatcacagttgggctcattgatggagtatacaagagagaatgtggtttttggtattggatgaggaaatctcttgtggctattgtcaaaatcagttggaagttattaggatactccattgttttgtaggttgttgatcatgtggctacatttgatcctaataggttgttgattttgtttacaaaatgcttgtagaatatagtgttactaaattcccaaatggccaaaatagctggtattaatactattactctagtcctcctcatttattcctagccacggtagcacttttcctggatgtgttagtacacaatttatctttcaatttgctgcttgcctccacactcattgctgttatcatgctccctctcagccacattgaaaattgccgtttagctttgtgccatccaccatgggatgggaaaatggtttggctgtcaaataatttggactaccagtagtgaaaggtaaatcatatgtaattgggtgaagcagattgcaagtagaaaggcattagtacctcctttgtctgtcttttgacctaagaatatctttattccaaatggagggatatccagcctagtctatcagtatttggataaagaatacatatgtttggctcctttgtttgctctgatttctgaagttgggaaggatttcaatgcttttgagggagggctaatttgactctcctctcctagctagatttgcttgcccaggctagaaaaagaacaaaacatgcccttcgtaactgggtcatcaaactattcgatgagaccacgttccacatttgacacttgttcttgaagtaactgttccctgttttgacacacagttttagttgcttcctgtaaccccattcctcgacctaaatgctccatgttcctgttaactatgagcaatttcaatatatatatttgtccaaatcatgctaactagactgtcaaaggcacatccctctgctagcatatgagttttgatgtattataggatgctgaaatctgttctgcatgaatcatatgctatgttattgaaattgtaaaatttgtatacttattagtttcccctctccagcaatcacgtcctataaccaagtttacagaggacttcgatttcatggcaatgaatgagaagtttaacaaagatgaagtatggggccatctcggtaaaagcaaaggacagttgaacgatgatcctaatgagtatgaagatgatgttctagaagatgatatttctcctgggaagccagaagttaaggtagtagcgctgttgcattcttgcaatttgtcaatatgttcgctgactagcatttttctatctcatctttgtgcagcctgtatatgtcaaagatgacttctttgattcactgtcatgcaataccattgataatggaggggggaatggaagaatcaaattctcggagcagagaaaaatagacacagaggtaatcaacagttacacattgtgtctttctcgttttcaccttatgacaacatgaagtgcttattatagcaagttttggttgtagacttttggtgattctgcaaggcatcggcccatgggcatgcgtggaggagggaggggtccccgtggtggaccccgtggacgtggttactatgggagggggtatggatatatgggaagggggcgcggctactcctacccaaaccaccaatcttagtaaggagggctatgcttttccattccgatgagcagatgaatggtggttgaatggtgatgaagaaggaagagcttttatggctatatttgtagtgtaatctcgcaggtatctcaggtcccggcttgttggcacgaacgggcctcaacaacaaagcaatcaatttgataaattaagaaattctcacaacgagttttctgtagagcttttacctgctttcctgaatccctgtcaatgttgatgctcgttgctctccctgaggatgctgatgggatataaactaaaaactattttgtgattcagcgaatgattatatccagtgttaattttggtactgtgggagcatatatgttagttctatcaaattgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0496000, RefSeq:Os06g0496000