Os06g0496800

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Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0496800| Description = Similar to S-locus receptor kinase precursor| Version = NM_001064229.1 GI:115468189 GeneID:4341100| Length = 2896 bp...")
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Gene Name

Os06g0496800

Description

Similar to S-locus receptor kinase precursor

Version

NM_001064229.1 GI:115468189 GeneID:4341100

Length

2896 bp

Definition

Oryza sativa Japonica Group Os06g0496800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18255404..18258299

Sequence Coding Region

18255553..18255664,18255752..18255865,18255947..18256092,18256156..18256369,18256872..18257109
,18257236..18257386,18257681..18258010

Expression

GEO Profiles:Os06g0496800

Genome Context

<gbrowseImage1> name=NC_008399:18255404..18258299 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18255404..18258299 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacgacgtggccggggagcggtggagcggcggctgcggcgggcaccaccgccggctgatgggcgcgtcgtcgtcgtcggctccggcgccggcgggggaggacgacgcagggaaaagcgggtcgagcaaggacgcgatgaagatcatggtgtccgtgctggtggtcgtcatcttctgcacgctgctctactgcgtctactgctggcgatggcgcaagcgcaacgctgtgaggagggcgcagatggagaggcttcggccgatgtcgagctccgacctgccgctcatggacctcgcctccatccacgccgccaccgacagcttctccaaggccaacaagctcggcgagggcggcttcggccccgtctacaggggcgttctccccggcggcggcgcggagatcgcggtgaagcggctgtcggcgaggtcgaggcagggcgcggcggagttcaggaacgaggtggagctcatcgccaagctgcagcaccgcaacctggtccgcctcctcggctggtgcgccgagcgcgacgagaagctcctcgtctacgagttcctccccaacggcagcctcgacgccttcctcttcaacgaggggaagagcgcgcagctggggtgggcgacgaggcacaacatcatcgtggggatcgcgaggggattgttgtacctgcacgaggactcgttgctgaaggtggtgcaccgagacctcaaggccagcaatgtcctcctcgacgacaagatgagccccaagatctccgacttcggcatggccaagatcttcgaggacgagtgtaacgaggtcaacaccggccgcgtggtcggcacctatgggtacatggcgccggagttcgcgctggagggcgtctactcggtgaagtctgacgtgttcagcttcggcgtgctgctgctagagatcctcagcggccagcgcaacggcgcgctctacctcgaggagcaccagcaatccctcatccaagacgcgtggaagctgtggacggaggggttggcggcggagttcatggacccggcgctggggcgggggtacgcggcggaggaggcgtggcggtgctaccacgtggggctcctgtgcgtgcaggaggacgcggacgcgcggcccaccatgtccaacgtcctcctcgccctcatcagcgaccacatgaacctccccgagccctccaggccgcccatgttcaccaggctccggagggcgctcctcctcgccccgccgctcatgaccaccaagaccgactccaccgcctcgccggtgtccgtcaacgacgtctccatcaccgtcatcgagccacgatga</cdnaseq>

Protein Sequence

<aaseq>MYDVAGERWSGGCGGHHRRLMGASSSSAPAPAGEDDAGKSGSSK DAMKIMVSVLVVVIFCTLLYCVYCWRWRKRNAVRRAQMERLRPMSSSDLPLMDLASIH AATDSFSKANKLGEGGFGPVYRGVLPGGGAEIAVKRLSARSRQGAAEFRNEVELIAKL QHRNLVRLLGWCAERDEKLLVYEFLPNGSLDAFLFNEGKSAQLGWATRHNIIVGIARG LLYLHEDSLLKVVHRDLKASNVLLDDKMSPKISDFGMAKIFEDECNEVNTGRVVGTYG YMAPEFALEGVYSVKSDVFSFGVLLLEILSGQRNGALYLEEHQQSLIQDAWKLWTEGL AAEFMDPALGRGYAAEEAWRCYHVGLLCVQEDADARPTMSNVLLALISDHMNLPEPSR PPMFTRLRRALLLAPPLMTTKTDSTASPVSVNDVSITVIEPR</aaseq>

Gene Sequence

<dnaseqindica>150..261#349..462#544..689#753..966#1469..1706#1833..1983#2278..2607#atcgccgcctcttcgcttcttcatctccccactcatccctcccattcccacctcctctccagttcagtttgcccctctgatcgatctgttccctagccaagaagcatcgatcagctgagtgagctggcaagcgagagatactagctaggatgtacgacgtggccggggagcggtggagcggcggctgcggcgggcaccaccgccggctgatgggcgcgtcgtcgtcgtcggctccggcgccggcgggggaggacgacgcaggtgagcaatcagttggtggtggttggttcttcgtttgatggtatggctgatggatcgcgatgaggttgggttggtggtggtgtgcagggaaaagcgggtcgagcaaggacgcgatgaagatcatggtgtccgtgctggtggtcgtcatcttctgcacgctgctctactgcgtctactgctggcgatggcgcaagcgcaacggtcagcttctcctcctcctccgcttctcttctccctcgatcccctcctgatggatcgaattggattggttggatgattcagctgtgaggagggcgcagatggagaggcttcggccgatgtcgagctccgacctgccgctcatggacctcgcctccatccacgccgccaccgacagcttctccaaggccaacaagctcggcgagggcggcttcggccccgtctacagggtaacgaaacgccatcctcctcctctctcctctccattgatgagctgaccaccggtggaacagggcgttctccccggcggcggcgcggagatcgcggtgaagcggctgtcggcgaggtcgaggcagggcgcggcggagttcaggaacgaggtggagctcatcgccaagctgcagcaccgcaacctggtccgcctcctcggctggtgcgccgagcgcgacgagaagctcctcgtctacgagttcctccccaacggcagcctcgacgccttcctcttcagtacgcctcgccctcttcttcttcttctcctcctccttctcgccgcgccgccattgctgctgccacggtcacggctggtggtctcgctgtctcctctctctctctcggtcacggtagttggaaaatccagcggctctgagctcgcgccatcaatatcccaccgtacgagcaattaatccgccattgatctccagcgaccaagcaattaatccgcccatcgatccacatccacggatcaacagtaacccaccaccactaacactgttctcacatactcacatggccgtcctagaatactgacaattacgctagctagctaactagatcgtcctaattaatcaagatctgatatggctgttaactaaagcttgcaattttttttgaccgtgcattaacaactactaactctgtttcgaaatataataaatcatagttaaaaatatttatattttgagacggaagggagtaacaatcagtgacatatgggtgaattttgttgcagacgaggggaagagcgcgcagctggggtgggcgacgaggcacaacatcatcgtggggatcgcgaggggattgttgtacctgcacgaggactcgttgctgaaggtggtgcaccgagacctcaaggccagcaatgtcctcctcgacgacaagatgagccccaagatctccgacttcggcatggccaagatcttcgaggacgagtgtaacgaggtcaacaccggccgcgtggtcggcacctagtacgttcattcaccttatgctttcccccacccaaagttcagttcatcaaaaaaaaaaaaaacttttcctctttttcctatcgatttgtactcaagttttaaaatgtcacaaatttaatcttgtagtgggtacatggcgccggagttcgcgctggagggcgtctactcggtgaagtctgacgtgttcagcttcggcgtgctgctgctagagatcctcagcggccagcgcaacggcgcgctctacctcgaggagcaccagcaatccctcatccaagacgtatgtatagtaatctcttcgtttttttaaatagatgatgttgttaacccttaatatattttatttaaaaattttatacaaacataaaaacatataaattatgcttaaaaatattttatgataaattaaatcattataaaataaataataaataaattaaaaaagcgaaatggagatagtagcatacattgcctcccatatatatcaggcaccatgcatggattgatctggatcggtctcaaagcaaagtaaagcaagctctgaaactcggtcataaacttaattaattttcaggcgtggaagctgtggacggaggggttggcggcggagttcatggacccggcgctggggcgggggtacgcggcggaggaggcgtggcggtgctaccacgtggggctcctgtgcgtgcaggaggacgcggacgcgcggcccaccatgtccaacgtcctcctcgccctcatcagcgaccacatgaacctccccgagccctccaggccgcccatgttcaccaggctccggagggcgctcctcctcgccccgccgctcatgaccaccaagaccgactccaccgcctcgccggtgtccgtcaacgacgtctccatcaccgtcatcgagccacgatgaggtcgtcgtcctcctcgtcgccgccgccgattaattgtctggggctagcttctttttttgtacatatagtggtagtagctaagtgtttagcagttaggtaagtcttttccttttactcctctgaatgttgtcgatggcttttctgaagctctcaagtctcaaccatcactgcaggcatttatctggtagtaggaggagagttagtgaagagatccacgaggaaaatgtaattaagtattatccttccacaagagggttaattaattaataaatcaaaagggtttgggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0496800, RefSeq:Os06g0496800