BGIOSGA034778

From RiceWiki
Revision as of 17:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA034778

Description

Two-component response regulator ARR8, putative,

Definition

Oryza sativa Indica Group BGIOSGA034778, complete gene.

LocusTag

OSRR9

Ensembl Transcript ID

BGIOSGA034778-TA

Ensembl Protein ID

BGIOSGA034778-PA

Length

1603

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1793963..1795565

Sequence Coding Region

1793963..1794065,1794165..1794256,1794377..1794454,1794570..1794640,1795304..1795565

Genome Context

<gbrowseImage1> name=IndicaChromosome11:1793963..1795565 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:1793963..1795565 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGTGGCTATAGAGGCTCCGTTCCATGTCCTGGCGGTGGATGATAGCCTTCCTGACAGGAAGCTCATCGAGAGGCTACTCAAGACCTCTTCTTTCCAAGTTACCACTGTTGATTCCGGGAGCAAGGCTCTGGAGTTCTTGGGGCTCCATGATCATGAGGACAGCCCAATTTCTACTCAATCAGATCAGCAGGAGGTTGCAGTGAACCTGATCATCACAGACTACTGCATGCCTGGCATGACAGGATATGATCTTCTCAAGAAGATCAAGGAATCGTCTTATTTAAGGGACATCCCAGTTGTGATCATGTCATCGGATAACATTCCTTCAAGGATCAATAGATGCCTGGAGGAAGGAGCTGATGAATTTTTCCTCAAACCAGTTCGGCTCTCCGACATGAGCAAGCTGAAGCCCCACATACTGAAAAGCAGATGCAAGGAGCACTACCAGCAGGAACAAAACCTGCAAAGCAACAGCGAAAGCAACAACAGCAGTAACCCCACAAGCGAGAACAGCAGCAGCAGCACTAGCAGCAACAGCCACAAGAGAAAGGCAGTCGATGAAGAAATTTTGCCCCACACAATAAGACCAAGGCATAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSSNPTSENSSSSTSSNSHKRKAVDEEILPHTIRPRHS</aaseq>

Gene Sequence

<dnaseqindica>1..103#203..294#415..492#608..678#1342..1603#ATGGCAGTGGCTATAGAGGCTCCGTTCCATGTCCTGGCGGTGGATGATAGCCTTCCTGACAGGAAGCTCATCGAGAGGCTACTCAAGACCTCTTCTTTCCAAGGTATTACAAGATTTTTCTTTTGTGCTTGCAGACTCTTTTCTTCTCTCGGTTGCTGTATGAATTGGCATCTGATGGTAGGTTTGGCTTTTGTTTGTGTAGTTACCACTGTTGATTCCGGGAGCAAGGCTCTGGAGTTCTTGGGGCTCCATGATCATGAGGACAGCCCAATTTCTACTCAATCAGATCAGCAGGTAAGAAGATGAATGGTACCATAGGTGCTAACCATGAAAAAAAAATACGGATTAACAGGAGGTTGCAGTGTTCTTTGTTCTGAACAAGAGTTTCTGAATTGCTCTTTTATGGATTAACAGGAGGTTGCAGTGAACCTGATCATCACAGACTACTGCATGCCTGGCATGACAGGATATGATCTTCTCAAGAAGATCAAGGTAATTACCATCTCTGCTCTATTTGATTGTACCAACCATTTGATTTGATCTACTCAAGATGACAGTGAGGTCAGTTCCTGAATACAGTTTTTTCCCTTTTGGTTTGTTCAATCAGGAATCGTCTTATTTAAGGGACATCCCAGTTGTGATCATGTCATCGGATAACATTCCTTCAAGGATCAATAGGTGAGCACTCTTATGGATCTACCATATTATTTCGACCATCTATTACAATACAAGCATCTTATGATATTTGGATGAACATGCCAAAGTCAGATGTGCAGATAATTTAGTAAAAACTTGTATGCATATAGAGAAAAAAGGTAGTGGAAACCTTATCATTTGTGAAAAATAATCAAATATAGAACCAAGCTGGTTTAAGGCTAAACTTGATATGGAGATCTCTCCGAATCCTTAATTGATTTGGAGTCACATGCAGTATAATTAAGGAACAAGCCCCACACAGCTCACGTCGTCTTAATATTCTATCTCGACAGTTTTGGTGTAAAATCAATAATGAAGATATGGAGTGATACGCAAATCAATCTTGTCGATCTTCCATGATGTGGTGTCTAATAAAATGGTCTTTAGTTGCAGACAACTAACTAGCACCACATGTCTTTGTCACAATATATTCTATTATATATGTACAACAAATGGAGCAACAAGAGGGCACTCTAAAAGTAAAGTAAAATATCCTCCAGATATCATAAGATATGAATAAAAAAAAGAAATTTGTAATGGATAGTACATGGAGAATAATCCTGTGTTTAATTTCTGGATTGCATATCATGGTTTTTGATCTTAGAATAAACTCTGATACAGTTTTGATTTTGTTATCTGAATCAGATGCCTGGAGGAAGGAGCTGATGAATTTTTCCTCAAACCAGTTCGGCTCTCCGACATGAGCAAGCTGAAGCCCCACATACTGAAAAGCAGATGCAAGGAGCACTACCAGCAGGAACAAAACCTGCAAAGCAACAGCGAAAGCAACAACAGCAGTAACCCCACAAGCGAGAACAGCAGCAGCAGCACTAGCAGCAACAGCCACAAGAGAAAGGCAGTCGATGAAGAAATTTTGCCCCACACAATAAGACCAAGGCATAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034778