Os06g0499000

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Revision as of 09:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0499000| Description = Conserved hypothetical protein| Version = NM_001064238.2 GI:297605870 GeneID:4341109| Length = 6657 bp| Definition ...")
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Gene Name

Os06g0499000

Description

Conserved hypothetical protein

Version

NM_001064238.2 GI:297605870 GeneID:4341109

Length

6657 bp

Definition

Oryza sativa Japonica Group Os06g0499000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18432679..18439335

Sequence Coding Region

18436868..18437397,18439071..18439161

Expression

GEO Profiles:Os06g0499000

Genome Context

<gbrowseImage1> name=NC_008399:18432679..18439335 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18432679..18439335 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aacacaagatgccttcaaccacataaacctgttacaaaagcacaagcagctgctgcactgaccagtggccgaatggaagaagtaatacgtgatgaattgaacagactagaagcagagaatcaatcccagctttctgttatgggtgaaataatggaagagttaattaatagaggagatataaaaagatattgggaggacaagatgaaagtggaggaaatccgtgaggttgcagttgataagcagcttcaacatgtgctgcaagagcttgcaaatgagaaaacagatagagaaaaggaacttgcggtcttactgaaagagagaacagctctagaacatcagaatcaggaacttatgaatttgaggtcagagattgatgggatgtatgatagactagccatggaaagtctagaggtcatgactgaggaacaaaacctggaaaagctctcacttgatgtgaataggaagcatcaagctgtctctgaatccaaatcttatcttgaagctgagaaggaagctcttactatgctaaggtcttgggtggaagaagaagcagcacgtgtacatgaacgagctgaagtacttgagagggctgtaaggagatggcgagtcccagctgactaa</cdnaseq>

Protein Sequence

<aaseq>NTRCLQPHKPVTKAQAAAALTSGRMEEVIRDELNRLEAENQSQL SVMGEIMEELINRGDIKRYWEDKMKVEEIREVAVDKQLQHVLQELANEKTDREKELAV LLKERTALEHQNQELMNLRSEIDGMYDRLAMESLEVMTEEQNLEKLSLDVNRKHQAVS ESKSYLEAEKEALTMLRSWVEEEAARVHERAEVLERAVRRWRVPAD</aaseq>

Gene Sequence

<dnaseqindica>4190..4719#6393..6483#gatgcgcacggcccaaaatggacgccgtccgatgaggccaccgccgcaaaaaccctagctctcgccctctccctccccctccccctccccctccccctccctgccacccatggccaccgccaccgcgtacaccctccgcctctccccgccgccgccgtcgccatcccctcgccggcagcagcaccaccacgccccgctcctcccccagcgcccccgcagccgccgcggggccaccgcgagggcggcggcggcggccagctgggcaccgacggaccgcggcagcgacgacgggctcggcggctggtggctcccagtccccgagcagcagcagcagcagaagcagccggcggagcgcgggagggaaggtgggggcggatctcttctgtccgattcgatcgctcgatgagggctttgagcggatctcttctcttttgtttctgcagtggggattgggattgcgggttcccgaagagctctcgcggtcgggctgggggcttcggcggcgatcgcattggtggggatgatgtggcacttgccgtcgtcgaggaagtgtgagttgctcactggtttatctccattttgattatgaacaccatacttcggtggtgttgcctatttcactgtgtgtttgaatgctaaatgtatgggatggattgaggagcttcagttatccattccagtgggacgcttagctatgacagggtaagagaatctgctggctgctgctgccgctagttacaaggggaaaggagaatgcagttgagcattatagattagattgtcttaattcatgttaccttagtgcataaattattctcaatcgtcatccctgctgcttatgttttgctgcttgttgtattttcttactttcggttgttgccttgttgcgaactgtctacttttgtacaaaatcagccggtgctaaattaggttggaatctgctatgttcattctggtgttaagagttcagttaccttttgctttgtaaatactgaatatgctttgttcagtgcattgtgttggagatcctcaatgcaatatgtgaacacacgattgcttgacattgttttcgaacacttaaataaattgtaaaaaataatgctgtgttcaggtttgcagcaatttgtacatgccccattacactatgttcaagagaagttatcaacactggagtcaaaagagactcccgaggaggatgcaggtgacaaggagtgggataatattgatgtttcaaagacagctaatgacgagagggttgatacaaaaactgatgattcaagccaaaaccacatgccagctggtggtgtacatgttctatttagagctcctgtagatcccatgcacgaggaggctttctctatattgaagaagctacaggtatgccagacttgtttgtagcttgttgaaatatatcaaatcataaatgtcctgctacctactctgtattgttgaagcattgttttttgacttcgttggtgaataagctgctcatttaccttaccttgtgttctcttttttttgggtcttacacagtatattctgaaaatgattagctaggtaggatacattatgcacttgcatgctactgagacaactgctatttttgtattaatttgaaggtctgtagttctttcaacagaagttgctataattcttaaatctcaatactccacatagtttgctaggatgaatttaatttaaagttttatttatccttctagctaccttctattaatttatcaactccagtttcatatgatatctgatgtcatggttcaagaaggcactaggcgctagagggtcagcagctctggcacctaggaccaacatggcttgtaaataccaagcaattagcgataaaattacataaaagttaaccattgaccactaaaatagcaggacaagagaccccaaggttagttagccacctagtgcaccatctaatgcctaatctgggtggctacttggtgtctcgcgcctaataggtgcatagggtcgatttttagaaatgtgatattgctcttactccctccgtttcacaatgtaagtcattctagcatttttcacattcatattaatgttaatgaatctagacatatatatctatctagattcattaacatgaatatgaatataggaaatgctagaatgacttacattgtgaaacggaggaagtacatttgtaaattttgtctttaagtttgatctgcagtttcattgaataataattggtccattcttgtggagtatcatttgactagtgattgatcaaaacacaataaataagcttgaccgcttggattatttttaatgataccattactttcaacatatgaccaagtgatttaattcttacaaatgttatccaaagatattctcatcaacttctgtgcttgatcagataattgaaaaagatgctagctccagcgacttttgttctcgaagggaattcgcaagatggttcattaagttacactcaaaattagaaaggtagcaaaacaaagccatatatattttttgcttgatattttagtattgccttctttatgatattgttttgcaggaaaaagatgcataggatcatccctaatagattaacttttggatcagtcagaagtgccttcgacgatatagatgctgatgacccagatttcttgtacatccaatgtaagttgttattatactgatggttactgaactcactcaacaatgctcttagatatcggagcctgtcttcatttgcctgccttctctacgctactttggccatgattttcttgttaaggagtactccattggatttccagatgcctataatttaatagcatgtgattataaactctaattttgtccattacaaaaaaaaaaaagctttaggagaatcaggcattgtatctagcaagttatcgaacttcctgggaacatcaacaagtggttcttctagtgacagtggaaattcaaacttcctacccaacaggtacgtatgaaatttctgttatccctttattgacagctaatacatttttcttacttgttatgttcttttcttttgtgtgtggtggttttagttatctatcacgttttgatcttgttaattggaaagcactagtggagcatccatttgcaactgaactagaccagaaggtacatatatcttttgttcttatgatattctgcaatgtttctataatattacttggtttcattcttttgtaaatcctgactctggttacagtccagatgctgagtaaaaatgttcgcattttggatttgagggcttggcctgatgtaccatcatctatacttgtagatttgatgggtggtgaacagagcatcatcagcaaagtttttggtatgatttgttagtagtctttattttgtgttgatgttttgaccgaatgattcttaatttactaagattatggttattctgttatgctaacttaggcatagcaagacctattattccctaaagcattgtgtgcttatactagtggtttgaatattcgttttgttttgttactttttttgaaccttcttaaattttgattttgaaaatgaacccctccaaaacttattttcagaattctgaaccttttaaccatgccagcccgcatggcatggcaaaacaacactgacacgccaaccacagcaggtgtgatatttttgtcctaccacaccagacaacgctgccatgccacccagagcaggcgtgatagttttgttctgccacgccagctagagtggcgtggcaagacagacaatgctgccacggcagccagaccggcgtggcagtattgttttgccacgccagcctgattggcttggccaaaggttcaaatcttgaaaataagttttggaagggtttattttcaaaattattaaaaattaaaggttcaaaaagttataaaaaaaatatgatgcttgccattccgtaatttgtttcaatttaactgttatgaaaatagagcttatggaagaacattgtctatgctgattttcgtgcatggacatgtttcccatcagtataagatgtagttcagtctgattctaaacctttctttcttctgccttttttgtgactgattttgttatccatatccttgtgtcccgtgaccaaagaaaaggtcatagctatcctgtttcaatgtacttcagctgacttgaacaataattacattttgtaggaaacacaagatgccttcaaccacataaacctgttacaaaagcacaagcagctgctgcactgaccagtggccgaatggaagaagtaatacgtgatgaattgaacagactagaagcagagaatcaatcccagctttctgttatgggtgaaataatggaagagttaattaatagaggagatataaaaagatattgggaggacaagatgaaagtggaggaaatccgtgaggttgcagttgataagcagcttcaacatgtgctgcaagagcttgcaaatgagaaaacagatagagaaaaggaacttgcggtcttactgaaagagagaacagctctagaacatcagaatcaggaacttatgaatttgaggtcagagattgatgggatgtatgatagactagccatggaaagtctagaggtcatgactgaggaacaaaacctggaaaagctctcacttgatgtgaataggaagcatcaagctgtctctgaatccaaatcttatcttgaagctgagaaggaagctcttactatgctaaggtctgtctttatacagtctttacattttccttttaattattacctgatattttcatatttgaaaactattagcgcctgcacttgtatgaatacatgtaatgtaatgcgcagtagttcagaactagatgctttctttactcctttaaaggagctggtagtttagatgctgtggtttaaacccaactctttcacttgaaaatatttttctggatatatcttcatagatgttgctgctatctgtatgatcttttgcaaacacatgcaagtagtttggtagctggttaatctgatgtgaactatgtacccaactcttagatttgatttagtttgcatatcttagattccgaacaataaagtaaccctttactgaacttttaacatgaacgctctaaaattctactatatttgatggttttgaagaaatgctgaagatcagtcatcagaataaaatttaagaaaggtcattttggagtcttgaactctttttgaagtctatttttcagcctgaactaaaaaaaagggttgtttcaccctcaacttctaaaaccagacaataaacaccctggaacctattctatagtggttttgtttgaaagaatggttgcttttgcacatcacttagctctgcatcagtggtacttgtccaatagaaagttcatgttagagaaacccactgctatttcaaaccaaactgctgtagaatataggctctagggtgttgtttgtcaggttctgaaagttaagggtgaaaaaaactggtttttaagttccagatggacagtggcttctagaagagttcaaagcccaaagacagactaacccacaaaatttatacttatggatcaggccaattcttgtagccatggtatttgagtattttggtaagtactactctgtcccaacaaaagaccaattctagcaatgaacctggacatgcatgtgtctagcttcctagctaggattgtgttttttttttttgggacggagggggtaaacttgtttaacagtggcgtacaccatggttttaaaagcgtcgcctaggcatctgagcaccatcagggatcagagcgtcgccaccgcctacccttccacacgtcttggatcctaatatctcatgaaatcaggtagacatgggcaaggtggggtcaagggcgcatgcgctgtagtgaattgcgcatgctgggaaggaaatcgcgtgaagataggatggaaatctcgtgtgcgacgatttagggagagggaagggtgaaagatggaaagagaatagagaatagggcgggcagagattggaaacatagcgacatgggaagatggaaagataagaggggaagatggaaagaggagatggttgtctccctcctgctgctcccttcatcgccaatggatctgtctccctgctcttcctcgccccttcatgttcttcctctcttttctgcctcgtatatctctagtatgcctcttgtgcttgtgtgtaaggcgttgccttgcctcgccttgtcgctttaagaacactggtgtacacttgtttaacaagtttaacccaaggtgatatcaggtcttgttaaacaagtgtacaccttggatgctcaaatatgtattttaacactgtttaacccatgaattttgtaacaagtttaacccatgaattttttacactggccaaatgatatcaggtcttgggtggaagaagaagcagcacgtgtacatgaacgagctgaagtacttgagagggctgtaaggagatggcgagtcccagctgactaagcctgcaaactaacctgcccttgcattgttgtatgtcagcttttctcttaacatttttatgttctgtggtatcagggcttcggctgtcagttataaacaattccttgtccgtagtagggtaaagtcagtgcatgttgccttgggcccagaatcattattttcattttgtgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0499000, RefSeq:Os06g0499000