Os06g0503100

From RiceWiki
Revision as of 09:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0503100| Description = ABC transporter related domain containing protein| Version = NM_001064247.1 GI:115468225 GeneID:4341120| Length = 22...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0503100

Description

ABC transporter related domain containing protein

Version

NM_001064247.1 GI:115468225 GeneID:4341120

Length

2207 bp

Definition

Oryza sativa Japonica Group Os06g0503100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18699400..18701606

Sequence Coding Region

18699708..18701101,18701516..18701582

Expression

GEO Profiles:Os06g0503100

Genome Context

<gbrowseImage1> name=NC_008399:18699400..18701606 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18699400..18701606 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaccaccaccaccaccaccgtcacagaacccgacaatgccgaagcctcgccatcgccgtcgctgctgtacccggcggcggcggaggcgtcggccgcggtcgccgccctcctcgcggacctccggctgggccacgcggcgcacacccgcgtctccgccacgcggctgtccggcggcgagcggcgtcgcgtgtccatcgggctcgccctcctccgggaccccggggtcctcctcctcgacgagcccacctccggcctcgactcctcctccgcgcacgtcgtcgtcggctgcctgcgcgccgtcgcggccgcgcgcggcacgacggtggtgctctccatccaccagcccagctcgcgcctcctctccgccgtggactccctcctcctcctctcccgtggcgccgtcgtgcaccacggctccgtcgactccctcgacgccgcgctcctctcccacggcctcgccgtgccggcgcagctcaacccgctggagtttgccctcgaggtactcgaccagatgccccacccgtccgcctcctcccctgagcccaagacgacggaggagctcgccgccgtgacgtcctccaagtcgtcgtcgtcgtcaacctcgccgtgctcgaggatacacgaggtggtggtcctgtacaagcgggcatggaaggtggtgtaccgaagcaagcaactgctgctgaccaacttcctggagtcggtggtggtggggacgctgctggggagcatctacatcaacgccggcgacggcgagggcggcgcgcacaagcggctggggctgttcgccttcacgctgacgttcctcctgacgtccacgacggagacgctgccgacgttcgtgtcggagcggccgatcgtgctggcggagacggcgtcggggctgtacaggctgtcgtcgcacgcggcggcggcgacgctggtgttcctcccgtacctcctggcggtggcgctcctctactccgcctgcgtctacttcctcgtcggcctctgcgcgtcggcggcggcgttcgcggcgttcgtgatggtggtgtgggcggtggtgctgacggcgaactccttcgtgctgttcgtgagctcgttcgcgccggactacatcgccgggatgtcgctggtgtcggtgtccctcgccggcttcttcctcttctccggctacttcctgtccagggggagcatgccgccgtactgggtgttcatgcactacgtctccccgtacaagtacgccctcgacgccctcctcgccaacgagtacacctgcgccgccacccgctgcttcggcgtcgccggccccgccgccggcgactgctccgagaccggcgccgacgtgctggcggagaaggggctcacggccaaggagcggtggaccggggtgcaggtgctcttcggcttcttcctcctctacagagttctctactgggtggtgctcagccgccgagccgccagggccaagaggtga</cdnaseq>

Protein Sequence

<aaseq>MSTTTTTTVTEPDNAEASPSPSLLYPAAAEASAAVAALLADLRL GHAAHTRVSATRLSGGERRRVSIGLALLRDPGVLLLDEPTSGLDSSSAHVVVGCLRAV AAARGTTVVLSIHQPSSRLLSAVDSLLLLSRGAVVHHGSVDSLDAALLSHGLAVPAQL NPLEFALEVLDQMPHPSASSPEPKTTEELAAVTSSKSSSSSTSPCSRIHEVVVLYKRA WKVVYRSKQLLLTNFLESVVVGTLLGSIYINAGDGEGGAHKRLGLFAFTLTFLLTSTT ETLPTFVSERPIVLAETASGLYRLSSHAAAATLVFLPYLLAVALLYSACVYFLVGLCA SAAAFAAFVMVVWAVVLTANSFVLFVSSFAPDYIAGMSLVSVSLAGFFLFSGYFLSRG SMPPYWVFMHYVSPYKYALDALLANEYTCAATRCFGVAGPAAGDCSETGADVLAEKGL TAKERWTGVQVLFGFFLLYRVLYWVVLSRRAARAKR</aaseq>

Gene Sequence

<dnaseqindica>506..1899#25..91#ctcgccgcctccggccacgccacaatgtccaccaccaccaccaccaccgtcacagaacccgacaatgccgaagcctcgccatcgccgtcgccgtcgccgtcgacgccgcccaagaaggtgatcatgtacgagctcgccgcgcggaacatctactacgccaagccggccgccgccgcggtggccacgacgacggtggcgtcgctggcgcggctcctgaggccctgcggcgcggcgcagccgccgtcgccggagtacatcctccgggacgtgtcgctgacggcgcggcccggggagatcctcgccgtcgtcggccccagcggcgccggcaagtccaccctgctcgacatcctcgccgcgcggacggcgccgacgcacgggaggctgctcctcaacgcggcgccgctccgaccgtcctcgttccggcggctgtccgcccacgtgccgcagatggacgtcgcgctgccgttgctcaccgtcgcagagacgttcgccttcgcggcgtcgctgctgtacccggcggcggcggaggcgtcggccgcggtcgccgccctcctcgcggacctccggctgggccacgcggcgcacacccgcgtctccgccacgcggctgtccggcggcgagcggcgtcgcgtgtccatcgggctcgccctcctccgggaccccggggtcctcctcctcgacgagcccacctccggcctcgactcctcctccgcgcacgtcgtcgtcggctgcctgcgcgccgtcgcggccgcgcgcggcacgacggtggtgctctccatccaccagcccagctcgcgcctcctctccgccgtggactccctcctcctcctctcccgtggcgccgtcgtgcaccacggctccgtcgactccctcgacgccgcgctcctctcccacggcctcgccgtgccggcgcagctcaacccgctggagtttgccctcgaggtactcgaccagatgccccacccgtccgcctcctcccctgagcccaagacgacggaggagctcgccgccgtgacgtcctccaagtcgtcgtcgtcgtcaacctcgccgtgctcgaggatacacgaggtggtggtcctgtacaagcgggcatggaaggtggtgtaccgaagcaagcaactgctgctgaccaacttcctggagtcggtggtggtggggacgctgctggggagcatctacatcaacgccggcgacggcgagggcggcgcgcacaagcggctggggctgttcgccttcacgctgacgttcctcctgacgtccacgacggagacgctgccgacgttcgtgtcggagcggccgatcgtgctggcggagacggcgtcggggctgtacaggctgtcgtcgcacgcggcggcggcgacgctggtgttcctcccgtacctcctggcggtggcgctcctctactccgcctgcgtctacttcctcgtcggcctctgcgcgtcggcggcggcgttcgcggcgttcgtgatggtggtgtgggcggtggtgctgacggcgaactccttcgtgctgttcgtgagctcgttcgcgccggactacatcgccgggatgtcgctggtgtcggtgtccctcgccggcttcttcctcttctccggctacttcctgtccagggggagcatgccgccgtactgggtgttcatgcactacgtctccccgtacaagtacgccctcgacgccctcctcgccaacgagtacacctgcgccgccacccgctgcttcggcgtcgccggccccgccgccggcgactgctccgagaccggcgccgacgtgctggcggagaaggggctcacggccaaggagcggtggaccggggtgcaggtgctcttcggcttcttcctcctctacagagttctctactgggtggtgctcagccgccgagccgccagggccaagaggtgacccatccatcgtcacctccagctcaggcgacggcgagcggccgcaccgtacgtacgtacgtgtgaacgcgtgcatggagacgaagtggggcccatgcatgcgcatgcaagtcaaggtatgacgtcaacaatggcgtagacaaggtggtgatcgagttaattaactggtaattaagctgctgctgctgctatactgataagtgatgatgtgtatattttatgaacataaaaaaacgagccttttatatgtgtaatgatgagtggttgatagtgcgatcttgacttgaaaatcacgatcgaattacttct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0503100, RefSeq:Os06g0503100